data_A1BGV # _chem_comp.id A1BGV _chem_comp.name "N-(5-carbamoyl-1H-pyrrol-3-yl)-2-[(propan-2-yl)amino]-1H-1,3-benzimidazole-6-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-11 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 326.353 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BGV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HPD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BGV N1 N1 N 0 1 N N N N N N -4.936 5.447 -20.571 6.174 0.388 -0.066 N1 A1BGV 1 A1BGV N3 N2 N 0 1 N N N N N N -8.788 4.024 -13.408 -2.168 0.546 0.016 N3 A1BGV 2 A1BGV C4 C1 C 0 1 Y N N N N N -5.694 5.161 -19.490 4.802 0.510 -0.047 C4 A1BGV 3 A1BGV C5 C2 C 0 1 Y N N N N N -7.412 4.733 -18.280 2.814 1.402 0.027 C5 A1BGV 4 A1BGV C6 C3 C 0 1 Y N N N N N -8.656 4.360 -17.772 1.689 2.233 0.092 C6 A1BGV 5 A1BGV C7 C4 C 0 1 Y N N N N N -8.820 4.343 -16.406 0.438 1.694 0.067 C7 A1BGV 6 A1BGV C8 C5 C 0 1 Y N N N N N -7.807 4.770 -15.533 0.264 0.306 -0.023 C8 A1BGV 7 A1BGV C10 C6 C 0 1 Y N N N N N -8.902 4.004 -12.005 -3.465 0.001 -0.007 C10 A1BGV 8 A1BGV C13 C7 C 0 1 N N N N N N -9.281 2.747 -8.561 -7.128 0.106 0.036 C13 A1BGV 9 A1BGV C15 C8 C 0 1 Y N N N N N -6.580 5.155 -16.038 1.376 -0.536 -0.089 C15 A1BGV 10 A1BGV C1 C9 C 0 1 N N N N N N -2.875 6.767 -20.244 8.186 -0.807 -0.775 C1 A1BGV 11 A1BGV C2 C10 C 0 1 N N N N N N -3.467 5.442 -20.690 6.790 -0.937 -0.162 C2 A1BGV 12 A1BGV C3 C11 C 0 1 N N N N N N -2.845 4.261 -19.967 6.903 -1.550 1.235 C3 A1BGV 13 A1BGV N2 N3 N 0 1 Y N N N N N -6.958 4.794 -19.599 4.147 1.643 0.031 N2 A1BGV 14 A1BGV C9 C12 C 0 1 N N N N N N -7.934 4.876 -14.043 -1.095 -0.266 -0.047 C9 A1BGV 15 A1BGV O1 O1 O 0 1 N N N N N N -7.224 5.654 -13.427 -1.246 -1.470 -0.125 O1 A1BGV 16 A1BGV C11 C13 C 0 1 Y N N N N N -8.698 5.094 -11.196 -3.777 -1.319 -0.091 C11 A1BGV 17 A1BGV N4 N4 N 0 1 Y N N N N N -8.834 4.708 -9.912 -5.130 -1.449 -0.086 N4 A1BGV 18 A1BGV C12 C14 C 0 1 Y N N N N N -9.090 3.364 -9.872 -5.693 -0.197 0.002 C12 A1BGV 19 A1BGV N5 N5 N 0 1 N N N N N N -9.474 1.437 -8.530 -8.030 -0.894 -0.021 N5 A1BGV 20 A1BGV O2 O2 O 0 1 N N N N N N -9.272 3.445 -7.539 -7.504 1.261 0.115 O2 A1BGV 21 A1BGV C14 C15 C 0 1 Y N N N N N -9.135 2.900 -11.168 -4.666 0.721 0.058 C14 A1BGV 22 A1BGV C16 C16 C 0 1 Y N N N N N -6.395 5.129 -17.407 2.646 0.007 -0.064 C16 A1BGV 23 A1BGV N6 N6 N 0 1 Y N N N N N -5.316 5.436 -18.213 3.923 -0.531 -0.111 N6 A1BGV 24 A1BGV H8 H1 H 0 1 N N N N N N -5.205 6.375 -20.827 6.731 1.181 -0.020 H8 A1BGV 25 A1BGV H11 H2 H 0 1 N N N N N N -9.347 3.398 -13.952 -2.047 1.507 0.079 H11 A1BGV 26 A1BGV H9 H3 H 0 1 N N N N N N -9.468 4.092 -18.432 1.813 3.304 0.161 H9 A1BGV 27 A1BGV H10 H4 H 0 1 N N N N N N -9.754 3.991 -15.994 -0.426 2.340 0.118 H10 A1BGV 28 A1BGV H17 H5 H 0 1 N N N N N N -5.784 5.469 -15.378 1.244 -1.606 -0.157 H17 A1BGV 29 A1BGV H2 H6 H 0 1 N N N N N N -3.357 7.588 -20.795 8.645 -1.793 -0.847 H2 A1BGV 30 A1BGV H1 H7 H 0 1 N N N N N N -3.045 6.900 -19.165 8.106 -0.370 -1.771 H1 A1BGV 31 A1BGV H3 H8 H 0 1 N N N N N N -1.794 6.773 -20.448 8.801 -0.164 -0.145 H3 A1BGV 32 A1BGV H4 H9 H 0 1 N N N N N N -3.224 5.327 -21.757 6.175 -1.579 -0.792 H4 A1BGV 33 A1BGV H5 H10 H 0 1 N N N N N N -3.306 3.328 -20.324 5.908 -1.643 1.672 H5 A1BGV 34 A1BGV H6 H11 H 0 1 N N N N N N -1.764 4.236 -20.168 7.361 -2.536 1.164 H6 A1BGV 35 A1BGV H7 H12 H 0 1 N N N N N N -3.014 4.363 -18.885 7.518 -0.908 1.865 H7 A1BGV 36 A1BGV H12 H14 H 0 1 N N N N N N -8.467 6.094 -11.532 -3.068 -2.131 -0.151 H12 A1BGV 37 A1BGV H13 H15 H 0 1 N N N N N N -8.760 5.308 -9.115 -5.617 -2.286 -0.136 H13 A1BGV 38 A1BGV H15 H16 H 0 1 N N N N N N -9.620 0.974 -7.656 -8.978 -0.694 0.002 H15 A1BGV 39 A1BGV H14 H17 H 0 1 N N N N N N -9.473 0.911 -9.381 -7.729 -1.814 -0.083 H14 A1BGV 40 A1BGV H16 H18 H 0 1 N N N N N N -9.315 1.882 -11.481 -4.768 1.794 0.134 H16 A1BGV 41 A1BGV H18 H19 H 0 1 N N N N N N -4.430 5.791 -17.915 4.148 -1.472 -0.178 H18 A1BGV 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BGV C1 C2 SING N N 1 A1BGV C2 C3 SING N N 2 A1BGV C2 N1 SING N N 3 A1BGV N1 C4 SING N N 4 A1BGV C4 N2 DOUB Y N 5 A1BGV N2 C5 SING Y N 6 A1BGV C5 C6 DOUB Y N 7 A1BGV C6 C7 SING Y N 8 A1BGV C7 C8 DOUB Y N 9 A1BGV C8 C9 SING N N 10 A1BGV C9 O1 DOUB N N 11 A1BGV C9 N3 SING N N 12 A1BGV N3 C10 SING N N 13 A1BGV C10 C11 DOUB Y N 14 A1BGV C11 N4 SING Y N 15 A1BGV N4 C12 SING Y N 16 A1BGV C12 C13 SING N N 17 A1BGV C13 N5 SING N N 18 A1BGV C13 O2 DOUB N N 19 A1BGV C12 C14 DOUB Y N 20 A1BGV C8 C15 SING Y N 21 A1BGV C15 C16 DOUB Y N 22 A1BGV C16 N6 SING Y N 23 A1BGV C4 N6 SING Y N 24 A1BGV C5 C16 SING Y N 25 A1BGV C10 C14 SING Y N 26 A1BGV N1 H8 SING N N 27 A1BGV N3 H11 SING N N 28 A1BGV C6 H9 SING N N 29 A1BGV C7 H10 SING N N 30 A1BGV C15 H17 SING N N 31 A1BGV C1 H2 SING N N 32 A1BGV C1 H1 SING N N 33 A1BGV C1 H3 SING N N 34 A1BGV C2 H4 SING N N 35 A1BGV C3 H5 SING N N 36 A1BGV C3 H6 SING N N 37 A1BGV C3 H7 SING N N 38 A1BGV C11 H12 SING N N 39 A1BGV N4 H13 SING N N 40 A1BGV N5 H15 SING N N 41 A1BGV N5 H14 SING N N 42 A1BGV C14 H16 SING N N 43 A1BGV N6 H18 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BGV SMILES ACDLabs 14.52 "NC(=O)c1cc(c[NH]1)NC(=O)c1ccc2nc(NC(C)C)[NH]c2c1" A1BGV InChI InChI 1.06 "InChI=1S/C16H18N6O2/c1-8(2)19-16-21-11-4-3-9(5-12(11)22-16)15(24)20-10-6-13(14(17)23)18-7-10/h3-8,18H,1-2H3,(H2,17,23)(H,20,24)(H2,19,21,22)" A1BGV InChIKey InChI 1.06 NNDZQUVYMKFTSR-UHFFFAOYSA-N A1BGV SMILES_CANONICAL CACTVS 3.385 "CC(C)Nc1[nH]c2cc(ccc2n1)C(=O)Nc3c[nH]c(c3)C(N)=O" A1BGV SMILES CACTVS 3.385 "CC(C)Nc1[nH]c2cc(ccc2n1)C(=O)Nc3c[nH]c(c3)C(N)=O" A1BGV SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)Nc1[nH]c2cc(ccc2n1)C(=O)Nc3cc([nH]c3)C(=O)N" A1BGV SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)Nc1[nH]c2cc(ccc2n1)C(=O)Nc3cc([nH]c3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BGV "SYSTEMATIC NAME" ACDLabs 14.52 "N-(5-carbamoyl-1H-pyrrol-3-yl)-2-[(propan-2-yl)amino]-1H-1,3-benzimidazole-6-carboxamide" A1BGV "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-(5-aminocarbonyl-1~{H}-pyrrol-3-yl)-2-(propan-2-ylamino)-3~{H}-benzimidazole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BGV "Create component" 2024-11-11 RCSB A1BGV "Initial release" 2025-02-26 RCSB #