data_A1BH5 # _chem_comp.id A1BH5 _chem_comp.name "1-{6-[(4P,6R,8R)-3-fluoro-4-(3-hydroxynaphthalen-1-yl)-7,7-dimethyl-5,6,7,8-tetrahydro-6,8-methanoquinolin-2-yl]-2,6-diazaspiro[3.4]octan-2-yl}propan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H34 F N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-21 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.619 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BH5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9E9I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BH5 C30 C1 C 0 1 N N N N N N -22.651 2.397 -14.030 8.295 -0.694 2.562 C30 A1BH5 1 A1BH5 C29 C2 C 0 1 N N N N N N -21.189 2.854 -14.062 7.159 -1.306 1.741 C29 A1BH5 2 A1BH5 C31 C3 C 0 1 N N N N N N -20.159 1.727 -14.110 6.867 -0.427 0.553 C31 A1BH5 3 A1BH5 O2 O1 O 0 1 N N N N N N -20.026 0.979 -13.144 7.506 0.590 0.380 O2 A1BH5 4 A1BH5 N3 N1 N 0 1 N N N N N N -19.447 1.563 -15.214 5.897 -0.770 -0.318 N3 A1BH5 5 A1BH5 C17 C4 C 0 1 N N N N N N -19.381 2.232 -16.525 5.333 -0.197 -1.553 C17 A1BH5 6 A1BH5 C16 C5 C 0 1 N N N N N N -18.350 0.635 -15.541 4.943 -1.885 -0.453 C16 A1BH5 7 A1BH5 C12 C6 C 0 1 N N N N N N -18.028 1.548 -16.725 4.043 -0.932 -1.228 C12 A1BH5 8 A1BH5 C13 C7 C 0 1 N N N N N N -17.841 0.809 -18.054 2.993 -0.158 -0.419 C13 A1BH5 9 A1BH5 C11 C8 C 0 1 N N N N N N -16.824 2.471 -16.560 3.267 -1.523 -2.408 C11 A1BH5 10 A1BH5 C10 C9 C 0 1 N N N N N N -15.738 1.755 -17.361 1.793 -1.515 -1.950 C10 A1BH5 11 A1BH5 N2 N2 N 0 1 N N N N N N -16.374 0.674 -18.155 1.772 -0.996 -0.564 N2 A1BH5 12 A1BH5 C9 C10 C 0 1 Y N N N N N -15.845 0.271 -19.331 0.623 -0.248 -0.328 C9 A1BH5 13 A1BH5 C8 C11 C 0 1 Y N N N N N -14.486 0.278 -19.622 -0.624 -0.858 -0.417 C8 A1BH5 14 A1BH5 F1 F1 F 0 1 N N N N N N -13.626 0.673 -18.653 -0.724 -2.170 -0.725 F1 A1BH5 15 A1BH5 N1 N3 N 0 1 Y N N N N N -16.681 -0.157 -20.287 0.730 1.038 -0.018 N1 A1BH5 16 A1BH5 C6 C12 C 0 1 Y N N N N N -16.196 -0.570 -21.465 -0.331 1.778 0.211 C6 A1BH5 17 A1BH5 C1 C13 C 0 1 N N R N N N -17.184 -1.088 -22.509 -0.216 3.246 0.575 C1 A1BH5 18 A1BH5 C2 C14 C 0 1 N N N N N N -16.825 -0.585 -23.913 -1.232 4.091 -0.219 C2 A1BH5 19 A1BH5 C15 C15 C 0 1 N N N N N N -17.932 -0.912 -24.919 -0.992 5.599 -0.111 C15 A1BH5 20 A1BH5 C14 C16 C 0 1 N N N N N N -16.407 0.889 -23.992 -1.440 3.620 -1.660 C14 A1BH5 21 A1BH5 C18 C17 C 0 1 N N N N N N -16.585 -2.424 -22.947 -1.119 3.511 1.807 C18 A1BH5 22 A1BH5 C3 C18 C 0 1 N N R N N N -15.699 -1.625 -23.905 -2.287 3.557 0.769 C3 A1BH5 23 A1BH5 C4 C19 C 0 1 N N N N N N -14.465 -1.095 -23.175 -2.785 2.166 0.355 C4 A1BH5 24 A1BH5 C5 C20 C 0 1 Y N N N N N -14.847 -0.590 -21.783 -1.605 1.254 0.135 C5 A1BH5 25 A1BH5 C7 C21 C 0 1 Y N N N N N -13.938 -0.146 -20.826 -1.773 -0.096 -0.181 C7 A1BH5 26 A1BH5 C19 C22 C 0 1 Y N N N N N -12.540 -0.046 -21.038 -3.125 -0.689 -0.307 C19 A1BH5 27 A1BH5 C20 C23 C 0 1 Y N N N N N -12.085 1.129 -21.637 -3.769 -0.701 -1.530 C20 A1BH5 28 A1BH5 C28 C24 C 0 1 Y N N N N N -11.585 -0.984 -20.648 -3.763 -1.255 0.823 C28 A1BH5 29 A1BH5 C27 C25 C 0 1 Y N N N N N -11.975 -2.170 -20.036 -3.138 -1.267 2.079 C27 A1BH5 30 A1BH5 C26 C26 C 0 1 Y N N N N N -11.034 -3.114 -19.656 -3.778 -1.818 3.147 C26 A1BH5 31 A1BH5 C25 C27 C 0 1 Y N N N N N -9.684 -2.869 -19.886 -5.049 -2.374 3.011 C25 A1BH5 32 A1BH5 C24 C28 C 0 1 Y N N N N N -9.276 -1.681 -20.486 -5.685 -2.381 1.808 C24 A1BH5 33 A1BH5 C23 C29 C 0 1 Y N N N N N -10.234 -0.743 -20.863 -5.054 -1.819 0.684 C23 A1BH5 34 A1BH5 C22 C30 C 0 1 Y N N N N N -9.817 0.438 -21.474 -5.684 -1.810 -0.572 C22 A1BH5 35 A1BH5 C21 C31 C 0 1 Y N N N N N -10.741 1.399 -21.875 -5.042 -1.258 -1.658 C21 A1BH5 36 A1BH5 O1 O2 O 0 1 N N N N N N -10.366 2.562 -22.481 -5.655 -1.257 -2.870 O1 A1BH5 37 A1BH5 H1 H1 H 0 1 N N N N N N -23.310 3.277 -13.996 8.506 -1.331 3.421 H1 A1BH5 38 A1BH5 H2 H2 H 0 1 N N N N N N -22.871 1.808 -14.933 9.189 -0.613 1.942 H2 A1BH5 39 A1BH5 H3 H3 H 0 1 N Y N N N N -22.822 1.777 -13.138 8.001 0.297 2.907 H3 A1BH5 40 A1BH5 H4 H4 H 0 1 N N N N N N -20.999 3.451 -13.158 7.453 -2.298 1.395 H4 A1BH5 41 A1BH5 H5 H5 H 0 1 N N N N N N -21.048 3.483 -14.953 6.266 -1.388 2.360 H5 A1BH5 42 A1BH5 H6 H6 H 0 1 N N N N N N -19.338 3.330 -16.479 5.234 0.889 -1.523 H6 A1BH5 43 A1BH5 H7 H7 H 0 1 N N N N N N -20.161 1.925 -17.237 5.821 -0.552 -2.460 H7 A1BH5 44 A1BH5 H8 H8 H 0 1 N N N N N N -18.673 -0.379 -15.817 5.322 -2.711 -1.055 H8 A1BH5 45 A1BH5 H9 H9 H 0 1 N N N N N N -17.558 0.573 -14.780 4.520 -2.213 0.496 H9 A1BH5 46 A1BH5 H10 H10 H 0 1 N N N N N N -18.243 1.396 -18.893 3.289 -0.086 0.627 H10 A1BH5 47 A1BH5 H11 H11 H 0 1 N N N N N N -18.328 -0.177 -18.030 2.835 0.834 -0.843 H11 A1BH5 48 A1BH5 H12 H12 H 0 1 N N N N N N -16.539 2.565 -15.502 3.392 -0.901 -3.295 H12 A1BH5 49 A1BH5 H13 H13 H 0 1 N N N N N N -17.030 3.469 -16.975 3.598 -2.542 -2.609 H13 A1BH5 50 A1BH5 H14 H14 H 0 1 N N N N N N -14.995 1.323 -16.675 1.206 -0.865 -2.598 H14 A1BH5 51 A1BH5 H15 H15 H 0 1 N N N N N N -15.243 2.469 -18.036 1.390 -2.528 -1.976 H15 A1BH5 52 A1BH5 H16 H16 H 0 1 N N N N N N -18.249 -1.083 -22.235 0.802 3.632 0.625 H16 A1BH5 53 A1BH5 H17 H17 H 0 1 N N N N N N -18.204 -1.974 -24.833 -0.646 5.840 0.894 H17 A1BH5 54 A1BH5 H18 H18 H 0 1 N N N N N N -18.814 -0.289 -24.709 -0.237 5.899 -0.837 H18 A1BH5 55 A1BH5 H19 H19 H 0 1 N N N N N N -17.573 -0.707 -25.938 -1.922 6.130 -0.313 H19 A1BH5 56 A1BH5 H20 H20 H 0 1 N N N N N N -15.613 1.085 -23.257 -2.414 3.956 -2.014 H20 A1BH5 57 A1BH5 H21 H21 H 0 1 N N N N N N -16.034 1.111 -25.003 -0.659 4.036 -2.295 H21 A1BH5 58 A1BH5 H22 H22 H 0 1 N N N N N N -17.275 1.528 -23.773 -1.396 2.531 -1.696 H22 A1BH5 59 A1BH5 H23 H23 H 0 1 N N N N N N -17.294 -3.107 -23.438 -1.166 2.676 2.506 H23 A1BH5 60 A1BH5 H24 H24 H 0 1 N N N N N N -16.040 -2.964 -22.159 -0.927 4.465 2.297 H24 A1BH5 61 A1BH5 H25 H25 H 0 1 N N N N N N -15.501 -2.108 -24.873 -3.090 4.258 0.999 H25 A1BH5 62 A1BH5 H26 H26 H 0 1 N N N N N N -13.726 -1.904 -23.077 -3.405 1.751 1.150 H26 A1BH5 63 A1BH5 H27 H27 H 0 1 N N N N N N -14.029 -0.268 -23.754 -3.374 2.247 -0.558 H27 A1BH5 64 A1BH5 H28 H28 H 0 1 N N N N N N -12.815 1.868 -21.932 -3.283 -0.273 -2.394 H28 A1BH5 65 A1BH5 H29 H29 H 0 1 N N N N N N -13.023 -2.358 -19.855 -2.153 -0.840 2.198 H29 A1BH5 66 A1BH5 H30 H30 H 0 1 N N N N N N -11.347 -4.034 -19.184 -3.294 -1.825 4.112 H30 A1BH5 67 A1BH5 H31 H31 H 0 1 N N N N N N -8.948 -3.605 -19.597 -5.536 -2.806 3.873 H31 A1BH5 68 A1BH5 H32 H32 H 0 1 N N N N N N -8.227 -1.489 -20.657 -6.670 -2.816 1.717 H32 A1BH5 69 A1BH5 H33 H33 H 0 1 N N N N N N -8.764 0.610 -21.639 -6.668 -2.239 -0.686 H33 A1BH5 70 A1BH5 H34 H34 H 0 1 N N N N N N -9.420 2.585 -22.566 -5.470 -2.041 -3.405 H34 A1BH5 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BH5 C15 C2 SING N N 1 A1BH5 C14 C2 SING N N 2 A1BH5 C2 C3 SING N N 3 A1BH5 C2 C1 SING N N 4 A1BH5 C3 C4 SING N N 5 A1BH5 C3 C18 SING N N 6 A1BH5 C4 C5 SING N N 7 A1BH5 C18 C1 SING N N 8 A1BH5 C1 C6 SING N N 9 A1BH5 O1 C21 SING N N 10 A1BH5 C21 C20 DOUB Y N 11 A1BH5 C21 C22 SING Y N 12 A1BH5 C5 C6 DOUB Y N 13 A1BH5 C5 C7 SING Y N 14 A1BH5 C20 C19 SING Y N 15 A1BH5 C22 C23 DOUB Y N 16 A1BH5 C6 N1 SING Y N 17 A1BH5 C19 C7 SING N N 18 A1BH5 C19 C28 DOUB Y N 19 A1BH5 C23 C28 SING Y N 20 A1BH5 C23 C24 SING Y N 21 A1BH5 C7 C8 DOUB Y N 22 A1BH5 C28 C27 SING Y N 23 A1BH5 C24 C25 DOUB Y N 24 A1BH5 N1 C9 DOUB Y N 25 A1BH5 C27 C26 DOUB Y N 26 A1BH5 C25 C26 SING Y N 27 A1BH5 C8 C9 SING Y N 28 A1BH5 C8 F1 SING N N 29 A1BH5 C9 N2 SING N N 30 A1BH5 N2 C13 SING N N 31 A1BH5 N2 C10 SING N N 32 A1BH5 C13 C12 SING N N 33 A1BH5 C10 C11 SING N N 34 A1BH5 C12 C11 SING N N 35 A1BH5 C12 C17 SING N N 36 A1BH5 C12 C16 SING N N 37 A1BH5 C17 N3 SING N N 38 A1BH5 C16 N3 SING N N 39 A1BH5 N3 C31 SING N N 40 A1BH5 C31 C29 SING N N 41 A1BH5 C31 O2 DOUB N N 42 A1BH5 C29 C30 SING N N 43 A1BH5 C30 H1 SING N N 44 A1BH5 C30 H2 SING N N 45 A1BH5 C30 H3 SING N N 46 A1BH5 C29 H4 SING N N 47 A1BH5 C29 H5 SING N N 48 A1BH5 C17 H6 SING N N 49 A1BH5 C17 H7 SING N N 50 A1BH5 C16 H8 SING N N 51 A1BH5 C16 H9 SING N N 52 A1BH5 C13 H10 SING N N 53 A1BH5 C13 H11 SING N N 54 A1BH5 C11 H12 SING N N 55 A1BH5 C11 H13 SING N N 56 A1BH5 C10 H14 SING N N 57 A1BH5 C10 H15 SING N N 58 A1BH5 C1 H16 SING N N 59 A1BH5 C15 H17 SING N N 60 A1BH5 C15 H18 SING N N 61 A1BH5 C15 H19 SING N N 62 A1BH5 C14 H20 SING N N 63 A1BH5 C14 H21 SING N N 64 A1BH5 C14 H22 SING N N 65 A1BH5 C18 H23 SING N N 66 A1BH5 C18 H24 SING N N 67 A1BH5 C3 H25 SING N N 68 A1BH5 C4 H26 SING N N 69 A1BH5 C4 H27 SING N N 70 A1BH5 C20 H28 SING N N 71 A1BH5 C27 H29 SING N N 72 A1BH5 C26 H30 SING N N 73 A1BH5 C25 H31 SING N N 74 A1BH5 C24 H32 SING N N 75 A1BH5 C22 H33 SING N N 76 A1BH5 O1 H34 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BH5 SMILES ACDLabs 14.52 "Oc1cc2ccccc2c(c1)c1c2CC3CC(c2nc(N2CCC4(CN(C4)C(=O)CC)C2)c1F)C3(C)C" A1BH5 InChI InChI 1.06 "InChI=1S/C31H34FN3O2/c1-4-25(37)35-16-31(17-35)9-10-34(15-31)29-27(32)26(22-14-20(36)11-18-7-5-6-8-21(18)22)23-12-19-13-24(28(23)33-29)30(19,2)3/h5-8,11,14,19,24,36H,4,9-10,12-13,15-17H2,1-3H3/t19-,24-/m0/s1" A1BH5 InChIKey InChI 1.06 FKASGFOVUQKHQK-CYFREDJKSA-N A1BH5 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1CC2(CCN(C2)c3nc4[C@@H]5C[C@H](Cc4c(c3F)c6cc(O)cc7ccccc67)C5(C)C)C1" A1BH5 SMILES CACTVS 3.385 "CCC(=O)N1CC2(CCN(C2)c3nc4[CH]5C[CH](Cc4c(c3F)c6cc(O)cc7ccccc67)C5(C)C)C1" A1BH5 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCC(=O)N1CC2(C1)CCN(C2)c3c(c(c4c(n3)[C@@H]5C[C@H](C4)C5(C)C)c6cc(cc7c6cccc7)O)F" A1BH5 SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(=O)N1CC2(C1)CCN(C2)c3c(c(c4c(n3)C5CC(C4)C5(C)C)c6cc(cc7c6cccc7)O)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BH5 "SYSTEMATIC NAME" ACDLabs 14.52 "1-{6-[(4P,6R,8R)-3-fluoro-4-(3-hydroxynaphthalen-1-yl)-7,7-dimethyl-5,6,7,8-tetrahydro-6,8-methanoquinolin-2-yl]-2,6-diazaspiro[3.4]octan-2-yl}propan-1-one" A1BH5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[7-[(1~{R},9~{R})-5-fluoranyl-10,10-dimethyl-6-(3-oxidanylnaphthalen-1-yl)-3-azatricyclo[7.1.1.0^{2,7}]undeca-2(7),3,5-trien-4-yl]-2,7-diazaspiro[3.4]octan-2-yl]propan-1-one" # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1BH5 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C30 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BH5 "Create component" 2024-11-21 RCSB A1BH5 "Modify PCM" 2024-11-25 RCSB A1BH5 "Initial release" 2025-02-26 RCSB #