data_A1BIG # _chem_comp.id A1BIG _chem_comp.name "L-gamma-glutamyl-S-[(2Z,6E)-3,7,15-trimethyl-11-methylidenehexadeca-2,6,14-trien-1-yl]-L-cysteinylglycine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H49 N3 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms S-Geranylgeranyl-L-glutathione _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-25 _chem_comp.pdbx_modified_date 2025-11-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 579.792 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BIG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ECJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BIG O01 O1 O 0 1 N N N N N N 128.818 132.963 94.620 -7.707 -5.604 0.541 O01 A1BIG 1 A1BIG C02 C1 C 0 1 N N N N N N 128.039 133.165 95.356 -7.243 -4.858 1.371 C02 A1BIG 2 A1BIG C03 C2 C 0 1 N N S N N N 127.552 131.825 96.125 -5.849 -4.312 1.198 C03 A1BIG 3 A1BIG N04 N1 N 0 1 N N N N N N 127.760 131.585 97.645 -5.103 -5.161 0.259 N04 A1BIG 4 A1BIG C05 C3 C 0 1 N N N N N N 125.989 131.369 95.597 -5.925 -2.886 0.647 C05 A1BIG 5 A1BIG C06 C4 C 0 1 N N N N N N 125.773 130.670 94.317 -4.519 -2.286 0.588 C06 A1BIG 6 A1BIG C07 C5 C 0 1 N N N N N N 125.849 131.316 93.248 -4.594 -0.883 0.045 C07 A1BIG 7 A1BIG N08 N2 N 0 1 N N N N N N 124.993 131.333 92.443 -3.469 -0.154 -0.096 N08 A1BIG 8 A1BIG C09 C6 C 0 1 N N R N N N 123.725 130.751 92.499 -3.542 1.211 -0.624 C09 A1BIG 9 A1BIG C10 C7 C 0 1 N N N N N N 123.437 130.020 91.319 -3.531 1.168 -2.131 C10 A1BIG 10 A1BIG N11 N3 N 0 1 N N N N N N 123.544 130.487 90.073 -3.591 2.314 -2.838 N11 A1BIG 11 A1BIG C12 C8 C 0 1 N N N N N N 123.075 129.731 89.017 -3.580 2.272 -4.302 C12 A1BIG 12 A1BIG C13 C9 C 0 1 N N N N N N 121.364 129.300 89.160 -3.655 3.676 -4.845 C13 A1BIG 13 A1BIG O14 O2 O 0 1 N N N N N N 120.607 129.593 88.240 -3.711 4.615 -4.087 O14 A1BIG 14 A1BIG O15 O3 O 0 1 N N N N N N 120.904 128.717 90.159 -3.660 3.883 -6.171 O15 A1BIG 15 A1BIG O16 O4 O 0 1 N N N N N N 123.055 128.895 91.513 -3.469 0.102 -2.707 O16 A1BIG 16 A1BIG C17 C10 C 0 1 N N N N N N 122.571 131.701 92.616 -2.338 2.014 -0.128 C17 A1BIG 17 A1BIG S18 S1 S 0 1 N N N N N N 122.736 133.218 93.633 -2.350 2.066 1.685 S18 A1BIG 18 A1BIG C19 C11 C 0 1 N N N N N N 121.673 132.620 95.201 -0.873 3.044 2.076 C19 A1BIG 19 A1BIG C20 C12 C 0 1 N N N N N N 121.206 133.634 95.960 -0.742 3.179 3.571 C20 A1BIG 20 A1BIG C21 C13 C 0 1 N N N N N N 121.951 134.408 96.678 0.282 2.645 4.189 C21 A1BIG 21 A1BIG C22 C14 C 0 1 N N N N N N 121.405 135.521 97.417 0.491 2.900 5.660 C22 A1BIG 22 A1BIG C23 C15 C 0 1 N N N N N N 123.189 134.244 96.787 1.251 1.775 3.430 C23 A1BIG 23 A1BIG C24 C16 C 0 1 N N N N N N 123.346 133.494 97.726 2.421 2.627 2.934 C24 A1BIG 24 A1BIG C25 C17 C 0 1 N N N N N N 124.295 133.742 98.714 3.389 1.758 2.175 C25 A1BIG 25 A1BIG C26 C18 C 0 1 N N N N N N 124.854 134.809 99.164 4.654 1.733 2.516 C26 A1BIG 26 A1BIG C27 C19 C 0 1 N N N N N N 124.429 136.100 98.543 5.169 2.681 3.568 C27 A1BIG 27 A1BIG C28 C20 C 0 1 N N N N N N 125.871 134.750 100.230 5.593 0.756 1.857 C28 A1BIG 28 A1BIG C29 C21 C 0 1 N N N N N N 125.945 133.671 101.032 6.300 1.440 0.685 C29 A1BIG 29 A1BIG C30 C22 C 0 1 N N N N N N 125.675 133.515 102.523 7.240 0.463 0.026 C30 A1BIG 30 A1BIG C31 C23 C 0 1 N N N N N N 126.434 133.526 103.650 7.052 0.115 -1.223 C31 A1BIG 31 A1BIG C32 C24 C 0 1 N N N N N N 127.762 133.805 103.620 5.878 0.665 -1.990 C32 A1BIG 32 A1BIG C33 C25 C 0 1 N N N N N N 126.018 133.246 105.065 8.010 -0.836 -1.892 C33 A1BIG 33 A1BIG C34 C26 C 0 1 N N N N N N 126.862 133.558 106.233 7.465 -2.263 -1.793 C34 A1BIG 34 A1BIG C35 C27 C 0 1 N N N N N N 126.567 134.831 107.152 8.424 -3.214 -2.462 C35 A1BIG 35 A1BIG C36 C28 C 0 1 N N N N N N 125.969 136.037 107.459 9.011 -4.153 -1.762 C36 A1BIG 36 A1BIG C37 C29 C 0 1 N N N N N N 125.009 136.590 106.512 8.766 -4.250 -0.278 C37 A1BIG 37 A1BIG C38 C30 C 0 1 N N N N N N 125.915 137.034 108.422 9.931 -5.135 -2.440 C38 A1BIG 38 A1BIG O39 O5 O 0 1 N N N N N N 126.762 131.840 92.958 -5.666 -0.409 -0.264 O39 A1BIG 39 A1BIG O40 O6 O 0 1 N N N N N N 127.569 134.236 95.414 -7.971 -4.512 2.445 O40 A1BIG 40 A1BIG H1 H1 H 0 1 N N N N N N 128.179 131.047 95.665 -5.340 -4.302 2.162 H1 A1BIG 41 A1BIG H2 H2 H 0 1 N N N N N N 127.381 130.695 97.897 -5.556 -5.186 -0.642 H2 A1BIG 42 A1BIG H3 H3 H 0 1 N N N N N N 128.738 131.603 97.854 -4.146 -4.853 0.175 H3 A1BIG 43 A1BIG H5 H5 H 0 1 N N N N N N 125.398 132.295 95.546 -6.354 -2.907 -0.355 H5 A1BIG 44 A1BIG H6 H6 H 0 1 N N N N N N 125.578 130.714 96.379 -6.553 -2.278 1.298 H6 A1BIG 45 A1BIG H7 H7 H 0 1 N N N N N N 126.521 129.865 94.260 -4.090 -2.266 1.590 H7 A1BIG 46 A1BIG H8 H8 H 0 1 N N N N N N 124.765 130.231 94.356 -3.891 -2.895 -0.063 H8 A1BIG 47 A1BIG H9 H9 H 0 1 N N N N N N 125.201 131.833 91.602 -2.611 -0.533 0.151 H9 A1BIG 48 A1BIG H10 H10 H 0 1 N N N N N N 123.682 130.066 93.358 -4.461 1.684 -0.281 H10 A1BIG 49 A1BIG H11 H11 H 0 1 N N N N N N 123.962 131.380 89.905 -3.640 3.166 -2.377 H11 A1BIG 50 A1BIG H12 H12 H 0 1 N N N N N N 123.213 130.306 88.089 -2.661 1.798 -4.646 H12 A1BIG 51 A1BIG H13 H13 H 0 1 N N N N N N 123.664 128.804 88.964 -4.438 1.700 -4.655 H13 A1BIG 52 A1BIG H14 H14 H 0 1 N N N N N N 119.971 128.580 90.045 -3.709 4.801 -6.472 H14 A1BIG 53 A1BIG H15 H15 H 0 1 N N N N N N 122.323 132.028 91.595 -1.418 1.540 -0.472 H15 A1BIG 54 A1BIG H16 H16 H 0 1 N N N N N N 121.729 131.129 93.032 -2.392 3.029 -0.521 H16 A1BIG 55 A1BIG H17 H17 H 0 1 N N N N N N 120.815 132.036 94.836 0.009 2.544 1.677 H17 A1BIG 56 A1BIG H18 H18 H 0 1 N N N N N N 122.311 131.981 95.830 -0.964 4.033 1.628 H18 A1BIG 57 A1BIG H19 H19 H 0 1 N N N N N N 120.140 133.810 95.968 -1.492 3.717 4.132 H19 A1BIG 58 A1BIG H20 H20 H 0 1 N N N N N N 122.214 136.038 97.953 -0.025 2.135 6.238 H20 A1BIG 59 A1BIG H21 H21 H 0 1 N N N N N N 120.921 136.221 96.720 1.557 2.869 5.886 H21 A1BIG 60 A1BIG H22 H22 H 0 1 N N N N N N 120.663 135.152 98.141 0.093 3.881 5.918 H22 A1BIG 61 A1BIG H23 H23 H 0 1 N N N N N N 123.597 133.797 95.869 1.626 0.990 4.087 H23 A1BIG 62 A1BIG H24 H24 H 0 1 N N N N N N 123.686 135.206 96.979 0.743 1.324 2.578 H24 A1BIG 63 A1BIG H25 H25 H 0 1 N N N N N N 122.375 133.434 98.239 2.046 3.412 2.277 H25 A1BIG 64 A1BIG H26 H26 H 0 1 N N N N N N 123.596 132.512 97.298 2.928 3.079 3.786 H26 A1BIG 65 A1BIG H27 H27 H 0 1 N N N N N N 124.635 132.845 99.209 3.041 1.155 1.349 H27 A1BIG 66 A1BIG H28 H28 H 0 1 N N N N N N 124.976 136.931 99.012 4.991 2.259 4.557 H28 A1BIG 67 A1BIG H29 H29 H 0 1 N N N N N N 124.649 136.078 97.465 6.239 2.835 3.426 H29 A1BIG 68 A1BIG H30 H30 H 0 1 N N N N N N 123.349 136.241 98.694 4.650 3.636 3.482 H30 A1BIG 69 A1BIG H31 H31 H 0 1 N N N N N N 126.851 134.849 99.740 6.335 0.420 2.582 H31 A1BIG 70 A1BIG H32 H32 H 0 1 N N N N N N 125.698 135.619 100.882 5.028 -0.101 1.491 H32 A1BIG 71 A1BIG H33 H33 H 0 1 N N N N N N 125.262 132.947 100.563 5.559 1.777 -0.040 H33 A1BIG 72 A1BIG H34 H34 H 0 1 N N N N N N 126.983 133.326 100.914 6.865 2.297 1.051 H34 A1BIG 73 A1BIG H35 H35 H 0 1 N N N N N N 124.628 133.358 102.736 8.068 0.051 0.583 H35 A1BIG 74 A1BIG H37 H37 H 0 1 N N N N N N 128.170 133.757 104.640 6.137 1.641 -2.400 H37 A1BIG 75 A1BIG H38 H38 H 0 1 N N N N N N 128.277 133.070 102.984 5.625 -0.015 -2.804 H38 A1BIG 76 A1BIG H39 H39 H 0 1 N N N N N N 125.077 133.795 105.217 8.123 -0.562 -2.940 H39 A1BIG 77 A1BIG H40 H40 H 0 1 N N N N N N 125.823 132.165 105.114 8.980 -0.783 -1.396 H40 A1BIG 78 A1BIG H41 H41 H 0 1 N N N N N N 126.817 132.680 106.894 7.353 -2.537 -0.744 H41 A1BIG 79 A1BIG H42 H42 H 0 1 N N N N N N 127.887 133.679 105.853 6.496 -2.316 -2.288 H42 A1BIG 80 A1BIG H43 H43 H 0 1 N N N N N N 127.179 134.642 108.021 8.627 -3.122 -3.519 H43 A1BIG 81 A1BIG H44 H44 H 0 1 N N N N N N 124.624 137.546 106.896 7.969 -4.968 -0.088 H44 A1BIG 82 A1BIG H45 H45 H 0 1 N N N N N N 125.504 136.757 105.544 9.679 -4.579 0.220 H45 A1BIG 83 A1BIG H46 H46 H 0 1 N N N N N N 124.175 135.885 106.381 8.475 -3.273 0.107 H46 A1BIG 84 A1BIG H47 H47 H 0 1 N N N N N N 125.207 137.814 108.104 9.983 -4.908 -3.505 H47 A1BIG 85 A1BIG H48 H48 H 0 1 N N N N N N 125.580 136.603 109.377 10.927 -5.061 -2.004 H48 A1BIG 86 A1BIG H49 H49 H 0 1 N N N N N N 126.914 137.476 108.549 9.548 -6.146 -2.302 H49 A1BIG 87 A1BIG H50 H50 H 0 1 N N N N N N 127.974 134.796 94.762 -8.861 -4.885 2.510 H50 A1BIG 88 A1BIG H4 H4 H 0 1 N N N N N N 127.915 134.814 103.211 5.023 0.767 -1.322 H4 A1BIG 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BIG O01 C02 DOUB N N 1 A1BIG C02 C03 SING N N 2 A1BIG C02 O40 SING N N 3 A1BIG C03 N04 SING N N 4 A1BIG C05 C06 SING N N 5 A1BIG C06 C07 SING N N 6 A1BIG C07 N08 SING N N 7 A1BIG C07 O39 DOUB N N 8 A1BIG N08 C09 SING N N 9 A1BIG C09 C10 SING N N 10 A1BIG C09 C17 SING N N 11 A1BIG C10 N11 SING N N 12 A1BIG C10 O16 DOUB N N 13 A1BIG N11 C12 SING N N 14 A1BIG C13 O14 DOUB N N 15 A1BIG C13 O15 SING N N 16 A1BIG C17 S18 SING N N 17 A1BIG S18 C19 SING N N 18 A1BIG C19 C20 SING N N 19 A1BIG C20 C21 DOUB N Z 20 A1BIG C21 C22 SING N N 21 A1BIG C21 C23 SING N N 22 A1BIG C23 C24 SING N N 23 A1BIG C24 C25 SING N N 24 A1BIG C25 C26 DOUB N E 25 A1BIG C26 C27 SING N N 26 A1BIG C26 C28 SING N N 27 A1BIG C28 C29 SING N N 28 A1BIG C29 C30 SING N N 29 A1BIG C30 C31 DOUB N E 30 A1BIG C31 C32 SING N N 31 A1BIG C31 C33 SING N N 32 A1BIG C33 C34 SING N N 33 A1BIG C34 C35 SING N N 34 A1BIG C35 C36 DOUB N N 35 A1BIG C36 C37 SING N N 36 A1BIG C36 C38 SING N N 37 A1BIG C05 C03 SING N N 38 A1BIG C12 C13 SING N N 39 A1BIG C03 H1 SING N N 40 A1BIG N04 H2 SING N N 41 A1BIG N04 H3 SING N N 42 A1BIG C05 H5 SING N N 43 A1BIG C05 H6 SING N N 44 A1BIG C06 H7 SING N N 45 A1BIG C06 H8 SING N N 46 A1BIG N08 H9 SING N N 47 A1BIG C09 H10 SING N N 48 A1BIG N11 H11 SING N N 49 A1BIG C12 H12 SING N N 50 A1BIG C12 H13 SING N N 51 A1BIG O15 H14 SING N N 52 A1BIG C17 H15 SING N N 53 A1BIG C17 H16 SING N N 54 A1BIG C19 H17 SING N N 55 A1BIG C19 H18 SING N N 56 A1BIG C20 H19 SING N N 57 A1BIG C22 H20 SING N N 58 A1BIG C22 H21 SING N N 59 A1BIG C22 H22 SING N N 60 A1BIG C23 H23 SING N N 61 A1BIG C23 H24 SING N N 62 A1BIG C24 H25 SING N N 63 A1BIG C24 H26 SING N N 64 A1BIG C25 H27 SING N N 65 A1BIG C27 H28 SING N N 66 A1BIG C27 H29 SING N N 67 A1BIG C27 H30 SING N N 68 A1BIG C28 H31 SING N N 69 A1BIG C28 H32 SING N N 70 A1BIG C29 H33 SING N N 71 A1BIG C29 H34 SING N N 72 A1BIG C30 H35 SING N N 73 A1BIG C32 H37 SING N N 74 A1BIG C32 H38 SING N N 75 A1BIG C33 H39 SING N N 76 A1BIG C33 H40 SING N N 77 A1BIG C34 H41 SING N N 78 A1BIG C34 H42 SING N N 79 A1BIG C35 H43 SING N N 80 A1BIG C37 H44 SING N N 81 A1BIG C37 H45 SING N N 82 A1BIG C37 H46 SING N N 83 A1BIG C38 H47 SING N N 84 A1BIG C38 H48 SING N N 85 A1BIG C38 H49 SING N N 86 A1BIG O40 H50 SING N N 87 A1BIG C32 H4 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BIG SMILES ACDLabs 14.52 "O=C(NC(CSC\C=C(\C)CC\C=C(/C)CC\C=C(/C)CC\C=C(/C)C)C(=O)NCC(=O)O)CCC(N)C(=O)O" A1BIG InChI InChI 1.06 "InChI=1S/C30H49N3O6S/c1-21(2)9-6-10-22(3)11-7-12-23(4)13-8-14-24(5)17-18-40-20-26(29(37)32-19-28(35)36)33-27(34)16-15-25(31)30(38)39/h9,11,13,17,25-26H,6-8,10,12,14-16,18-20,31H2,1-5H3,(H,32,37)(H,33,34)(H,35,36)(H,38,39)/b22-11+,23-13+,24-17-/t25-,26-/m0/s1" A1BIG InChIKey InChI 1.06 BAJIBEVLRWVBAZ-WKALPULASA-N A1BIG SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCCC(/C)=C/CCC(/C)=C/CCC(\C)=C/CSC[C@H](NC(=O)CC[C@H](N)C(O)=O)C(=O)NCC(O)=O" A1BIG SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCSC[CH](NC(=O)CC[CH](N)C(O)=O)C(=O)NCC(O)=O" A1BIG SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(=CCC/C(=C/CC/C(=C/CC/C(=C\CSC[C@@H](C(=O)NCC(=O)O)NC(=O)CC[C@@H](C(=O)O)N)/C)/C)/C)C" A1BIG SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(=CCCC(=CCCC(=CCCC(=CCSCC(C(=O)NCC(=O)O)NC(=O)CCC(C(=O)O)N)C)C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BIG "SYSTEMATIC NAME" ACDLabs 14.52 "L-gamma-glutamyl-S-[(2Z,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-L-cysteinylglycine" A1BIG "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{S})-2-azanyl-5-[[(2~{R})-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-3-[(2~{Z},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]sulfanyl-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1BIG _pdbx_chem_comp_synonyms.name S-Geranylgeranyl-L-glutathione _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BIG "Create component" 2024-11-25 RCSB A1BIG "Initial release" 2025-11-05 RCSB A1BIG "Modify value order" 2025-11-05 RCSB #