data_A1BIH # _chem_comp.id A1BIH _chem_comp.name N~2~-octanoyl-L-lysine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H28 N2 O3" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-25 _chem_comp.pdbx_modified_date 2025-10-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 272.384 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BIH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9EGB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BIH CB C1 C 0 1 N N N N N N -29.121 17.262 56.985 3.621 0.448 -0.201 CB A1BIH 1 A1BIH CD C2 C 0 1 N N N N N N -29.010 15.341 58.679 4.887 -1.706 -0.167 CD A1BIH 2 A1BIH C01 C3 C 0 1 N N N N N N -25.751 10.313 48.134 -8.593 -1.298 -0.225 C01 A1BIH 3 A1BIH C02 C4 C 0 1 N N N N N N -27.205 10.321 48.569 -7.398 -0.660 0.486 C02 A1BIH 4 A1BIH C03 C5 C 0 1 N N N N N N -27.382 10.495 50.090 -6.134 -0.875 -0.347 C03 A1BIH 5 A1BIH C04 C6 C 0 1 N N N N N N -27.731 11.925 50.480 -4.939 -0.237 0.364 C04 A1BIH 6 A1BIH C05 C7 C 0 1 N N N N N N -27.402 12.234 51.923 -3.674 -0.452 -0.469 C05 A1BIH 7 A1BIH C06 C8 C 0 1 N N N N N N -28.515 12.915 52.758 -2.480 0.187 0.243 C06 A1BIH 8 A1BIH C07 C9 C 0 1 N N N N N N -28.314 14.417 53.016 -1.215 -0.029 -0.591 C07 A1BIH 9 A1BIH C08 C10 C 0 1 N N N N N N -29.378 15.125 53.937 -0.038 0.600 0.110 C08 A1BIH 10 A1BIH CA C11 C 0 1 N N S N Y N -29.868 17.030 55.661 2.333 1.146 0.239 CA A1BIH 11 A1BIH C C12 C 0 1 N N N N Y Y -30.304 18.472 55.064 2.408 2.609 -0.119 C A1BIH 12 A1BIH CG C13 C 0 1 N N N N N N -29.813 16.561 58.160 3.599 -1.007 0.272 CG A1BIH 13 A1BIH CE C14 C 0 1 N N N N N N -29.532 14.821 60.069 4.865 -3.161 0.306 CE A1BIH 14 A1BIH N N1 N 0 1 N N N Y Y N -28.961 16.253 54.705 1.189 0.535 -0.443 N A1BIH 15 A1BIH NZ N2 N 0 1 N N N N N N -28.379 14.707 61.034 6.102 -3.832 -0.116 NZ A1BIH 16 A1BIH O09 O1 O 0 1 N N N N N N -30.507 14.638 54.017 -0.196 1.165 1.172 O09 A1BIH 17 A1BIH OXT O2 O 0 1 N N N N Y Y -31.496 18.783 55.087 3.383 3.375 0.393 OXT A1BIH 18 A1BIH O O3 O 0 1 N N N N Y Y -29.388 19.211 54.626 1.589 3.091 -0.866 O A1BIH 19 A1BIH HB2 H1 H 0 1 N N N N N N -28.097 16.870 56.890 3.697 0.475 -1.288 HB2 A1BIH 20 A1BIH HB3 H2 H 0 1 N N N N N N -29.083 18.343 57.188 4.479 0.959 0.237 HB3 A1BIH 21 A1BIH HD2 H3 H 0 1 N N N N N N -29.093 14.526 57.944 4.963 -1.678 -1.254 HD2 A1BIH 22 A1BIH HD3 H4 H 0 1 N N N N N N -27.955 15.633 58.786 5.745 -1.195 0.270 HD3 A1BIH 23 A1BIH H5 H5 H 0 1 N N N N N N -25.695 10.186 47.043 -8.721 -0.838 -1.205 H5 A1BIH 24 A1BIH H6 H6 H 0 1 N N N N N N -25.278 11.265 48.417 -8.415 -2.367 -0.346 H6 A1BIH 25 A1BIH H7 H7 H 0 1 N N N N N N -25.225 9.482 48.627 -9.494 -1.145 0.369 H7 A1BIH 26 A1BIH H8 H8 H 0 1 N N N N N N -27.718 11.151 48.060 -7.576 0.409 0.608 H8 A1BIH 27 A1BIH H9 H9 H 0 1 N N N N N N -27.665 9.367 48.270 -7.271 -1.120 1.466 H9 A1BIH 28 A1BIH H10 H10 H 0 1 N N N N N N -28.190 9.830 50.429 -5.956 -1.944 -0.468 H10 A1BIH 29 A1BIH H11 H11 H 0 1 N N N N N N -26.443 10.213 50.588 -6.261 -0.415 -1.327 H11 A1BIH 30 A1BIH H12 H12 H 0 1 N N N N N N -27.165 12.614 49.835 -5.117 0.832 0.486 H12 A1BIH 31 A1BIH H13 H13 H 0 1 N N N N N N -28.809 12.079 50.324 -4.811 -0.697 1.344 H13 A1BIH 32 A1BIH H14 H14 H 0 1 N N N N N N -27.147 11.285 52.418 -3.496 -1.520 -0.590 H14 A1BIH 33 A1BIH H15 H15 H 0 1 N N N N N N -26.525 12.898 51.930 -3.802 0.009 -1.449 H15 A1BIH 34 A1BIH H16 H16 H 0 1 N N N N N N -29.468 12.786 52.224 -2.658 1.255 0.364 H16 A1BIH 35 A1BIH H17 H17 H 0 1 N N N N N N -27.328 14.545 53.486 -1.037 -1.097 -0.712 H17 A1BIH 36 A1BIH HA H18 H 0 1 N N N N Y N -30.780 16.447 55.855 2.212 1.041 1.317 HA A1BIH 37 A1BIH HG2 H19 H 0 1 N N N N N N -29.929 17.282 58.982 3.523 -1.035 1.359 HG2 A1BIH 38 A1BIH HG3 H20 H 0 1 N N N N N N -30.805 16.217 57.831 2.741 -1.518 -0.165 HG3 A1BIH 39 A1BIH HE2 H21 H 0 1 N N N N N N -30.275 15.527 60.468 4.789 -3.189 1.393 HE2 A1BIH 40 A1BIH HE3 H22 H 0 1 N N N N N N -29.999 13.833 59.938 4.007 -3.672 -0.132 HE3 A1BIH 41 A1BIH H H23 H 0 1 N N N Y Y N -28.012 16.556 54.612 1.315 0.083 -1.292 H A1BIH 42 A1BIH HZ1 H24 H 0 1 N N N N N N -28.714 14.376 61.916 6.111 -4.795 0.184 HZ1 A1BIH 43 A1BIH HZ2 H25 H 0 1 N N N N N N -27.704 14.065 60.672 6.228 -3.763 -1.115 HZ2 A1BIH 44 A1BIH HXT HXT H 0 1 N N N N Y Y -31.603 19.655 54.726 3.390 4.307 0.135 HXT A1BIH 45 A1BIH H1 H27 H 0 1 N N N N N N -28.569 12.407 53.732 -2.352 -0.274 1.222 H1 A1BIH 46 A1BIH H2 H28 H 0 1 N N N N N N -28.325 14.927 52.041 -1.343 0.432 -1.571 H2 A1BIH 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BIH C01 C02 SING N N 1 A1BIH C02 C03 SING N N 2 A1BIH C03 C04 SING N N 3 A1BIH C04 C05 SING N N 4 A1BIH C05 C06 SING N N 5 A1BIH C06 C07 SING N N 6 A1BIH C07 C08 SING N N 7 A1BIH C08 O09 DOUB N N 8 A1BIH C08 N SING N N 9 A1BIH O C DOUB N N 10 A1BIH N CA SING N N 11 A1BIH C OXT SING N N 12 A1BIH C CA SING N N 13 A1BIH CA CB SING N N 14 A1BIH CB CG SING N N 15 A1BIH CG CD SING N N 16 A1BIH CD CE SING N N 17 A1BIH CE NZ SING N N 18 A1BIH CB HB2 SING N N 19 A1BIH CB HB3 SING N N 20 A1BIH CD HD2 SING N N 21 A1BIH CD HD3 SING N N 22 A1BIH C01 H5 SING N N 23 A1BIH C01 H6 SING N N 24 A1BIH C01 H7 SING N N 25 A1BIH C02 H8 SING N N 26 A1BIH C02 H9 SING N N 27 A1BIH C03 H10 SING N N 28 A1BIH C03 H11 SING N N 29 A1BIH C04 H12 SING N N 30 A1BIH C04 H13 SING N N 31 A1BIH C05 H14 SING N N 32 A1BIH C05 H15 SING N N 33 A1BIH C06 H16 SING N N 34 A1BIH C07 H17 SING N N 35 A1BIH CA HA SING N N 36 A1BIH CG HG2 SING N N 37 A1BIH CG HG3 SING N N 38 A1BIH CE HE2 SING N N 39 A1BIH CE HE3 SING N N 40 A1BIH N H SING N N 41 A1BIH NZ HZ1 SING N N 42 A1BIH NZ HZ2 SING N N 43 A1BIH OXT HXT SING N N 44 A1BIH C06 H1 SING N N 45 A1BIH C07 H2 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BIH SMILES ACDLabs 14.52 "O=C(NC(CCCCN)C(=O)O)CCCCCCC" A1BIH InChI InChI 1.06 "InChI=1S/C14H28N2O3/c1-2-3-4-5-6-10-13(17)16-12(14(18)19)9-7-8-11-15/h12H,2-11,15H2,1H3,(H,16,17)(H,18,19)/t12-/m0/s1" A1BIH InChIKey InChI 1.06 GGCVGFFRMZLQBP-LBPRGKRZSA-N A1BIH SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC(=O)N[C@@H](CCCCN)C(O)=O" A1BIH SMILES CACTVS 3.385 "CCCCCCCC(=O)N[CH](CCCCN)C(O)=O" A1BIH SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCCCCCCC(=O)N[C@@H](CCCCN)C(=O)O" A1BIH SMILES "OpenEye OEToolkits" 3.1.0.0 "CCCCCCCC(=O)NC(CCCCN)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BIH "SYSTEMATIC NAME" ACDLabs 14.52 N~2~-octanoyl-L-lysine A1BIH "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{S})-6-azanyl-2-(octanoylamino)hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BIH "Create component" 2024-11-25 RCSB A1BIH "Initial release" 2025-08-13 RCSB A1BIH "Modify atom id" 2025-10-16 RCSB #