data_A1BJ1 # _chem_comp.id A1BJ1 _chem_comp.name "6-{[(3-chloro-4-fluorophenyl)methyl]sulfanyl}-9H-purine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H8 Cl F N4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-09 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 294.735 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BJ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HQG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BJ1 N2 N1 N 0 1 Y N N N N N -46.782 -29.361 3.573 4.775 -1.200 0.874 N2 A1BJ1 1 A1BJ1 C3 C1 C 0 1 Y N N N N N -52.433 -29.950 6.851 -2.241 -1.171 -1.373 C3 A1BJ1 2 A1BJ1 C6 C2 C 0 1 Y N N N N N -47.941 -29.225 6.199 2.357 -0.262 0.068 C6 A1BJ1 3 A1BJ1 C9 C3 C 0 1 Y N N N N N -46.521 -29.311 6.062 3.520 0.484 -0.195 C9 A1BJ1 4 A1BJ1 C12 C4 C 0 1 Y N N N N N -53.173 -28.015 8.687 -3.822 0.222 0.419 C12 A1BJ1 5 A1BJ1 C1 C5 C 0 1 Y N N N N N -54.013 -28.334 7.627 -4.356 -0.213 -0.783 C1 A1BJ1 6 A1BJ1 C10 C6 C 0 1 Y N N N N N -44.320 -29.447 6.144 5.055 1.901 -0.777 C10 A1BJ1 7 A1BJ1 C11 C7 C 0 1 Y N N N N N -51.954 -28.678 8.816 -2.497 -0.035 0.720 C11 A1BJ1 8 A1BJ1 C2 C8 C 0 1 Y N N N N N -53.653 -29.308 6.697 -3.563 -0.910 -1.679 C2 A1BJ1 9 A1BJ1 C4 C9 C 0 1 Y N N N N N -51.550 -29.672 7.914 -1.709 -0.736 -0.173 C4 A1BJ1 10 A1BJ1 C5 C10 C 0 1 N N N N N N -50.205 -30.365 8.075 -0.269 -1.026 0.161 C5 A1BJ1 11 A1BJ1 C7 C11 C 0 1 Y N N N N N -48.094 -29.277 3.853 3.661 -1.864 1.099 C7 A1BJ1 12 A1BJ1 C8 C12 C 0 1 Y N N N N N -46.027 -29.378 4.712 4.752 -0.033 0.237 C8 A1BJ1 13 A1BJ1 F1 F1 F 0 1 N N N N N N -55.193 -27.714 7.470 -5.650 0.037 -1.079 F1 A1BJ1 14 A1BJ1 N1 N2 N 0 1 Y N N N N N -48.713 -29.211 5.101 2.480 -1.419 0.712 N1 A1BJ1 15 A1BJ1 N3 N3 N 0 1 Y N N N N N -45.411 -29.360 6.940 3.775 1.666 -0.806 N3 A1BJ1 16 A1BJ1 N4 N4 N 0 1 Y N N N N N -44.641 -29.458 4.775 5.701 0.882 -0.143 N4 A1BJ1 17 A1BJ1 S1 S1 S 0 1 N N N N N N -48.714 -29.157 7.861 0.776 0.322 -0.444 S1 A1BJ1 18 A1BJ1 CL1 CL1 CL 0 0 N N N N N N -53.610 -26.809 9.838 -4.817 1.091 1.546 CL1 A1BJ1 19 A1BJ1 H2 H1 H 0 1 N N N N N N -52.147 -30.696 6.124 -1.623 -1.719 -2.070 H2 A1BJ1 20 A1BJ1 H6 H2 H 0 1 N N N N N N -43.309 -29.502 6.521 5.534 2.775 -1.194 H6 A1BJ1 21 A1BJ1 H8 H3 H 0 1 N N N N N N -51.301 -28.418 9.636 -2.080 0.305 1.657 H8 A1BJ1 22 A1BJ1 H1 H4 H 0 1 N N N N N N -54.309 -29.557 5.876 -3.978 -1.250 -2.616 H1 A1BJ1 23 A1BJ1 H4 H5 H 0 1 N N N N N N -50.126 -31.159 7.318 -0.157 -1.115 1.242 H4 A1BJ1 24 A1BJ1 H3 H6 H 0 1 N N N N N N -50.156 -30.810 9.080 0.033 -1.960 -0.313 H3 A1BJ1 25 A1BJ1 H5 H7 H 0 1 N N N N N N -48.756 -29.258 3.000 3.715 -2.809 1.619 H5 A1BJ1 26 A1BJ1 H7 H9 H 0 1 N N N N N N -44.004 -29.512 4.006 6.656 0.815 0.010 H7 A1BJ1 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BJ1 N2 C7 DOUB Y N 1 A1BJ1 N2 C8 SING Y N 2 A1BJ1 C7 N1 SING Y N 3 A1BJ1 C8 N4 SING Y N 4 A1BJ1 C8 C9 DOUB Y N 5 A1BJ1 N4 C10 SING Y N 6 A1BJ1 N1 C6 DOUB Y N 7 A1BJ1 C9 C6 SING Y N 8 A1BJ1 C9 N3 SING Y N 9 A1BJ1 C10 N3 DOUB Y N 10 A1BJ1 C6 S1 SING N N 11 A1BJ1 C2 C3 DOUB Y N 12 A1BJ1 C2 C1 SING Y N 13 A1BJ1 C3 C4 SING Y N 14 A1BJ1 F1 C1 SING N N 15 A1BJ1 C1 C12 DOUB Y N 16 A1BJ1 S1 C5 SING N N 17 A1BJ1 C4 C5 SING N N 18 A1BJ1 C4 C11 DOUB Y N 19 A1BJ1 C12 C11 SING Y N 20 A1BJ1 C12 CL1 SING N N 21 A1BJ1 C3 H2 SING N N 22 A1BJ1 C10 H6 SING N N 23 A1BJ1 C11 H8 SING N N 24 A1BJ1 C2 H1 SING N N 25 A1BJ1 C5 H4 SING N N 26 A1BJ1 C5 H3 SING N N 27 A1BJ1 C7 H5 SING N N 28 A1BJ1 N4 H7 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BJ1 SMILES ACDLabs 14.52 "Fc1ccc(cc1Cl)CSc1ncnc2[NH]cnc21" A1BJ1 InChI InChI 1.06 "InChI=1S/C12H8ClFN4S/c13-8-3-7(1-2-9(8)14)4-19-12-10-11(16-5-15-10)17-6-18-12/h1-3,5-6H,4H2,(H,15,16,17,18)" A1BJ1 InChIKey InChI 1.06 OMVYZAUYAZHFDJ-UHFFFAOYSA-N A1BJ1 SMILES_CANONICAL CACTVS 3.385 "Fc1ccc(CSc2ncnc3[nH]cnc23)cc1Cl" A1BJ1 SMILES CACTVS 3.385 "Fc1ccc(CSc2ncnc3[nH]cnc23)cc1Cl" A1BJ1 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CSc2c3c([nH]cn3)ncn2)Cl)F" A1BJ1 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CSc2c3c([nH]cn3)ncn2)Cl)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BJ1 "SYSTEMATIC NAME" ACDLabs 14.52 "6-{[(3-chloro-4-fluorophenyl)methyl]sulfanyl}-9H-purine" A1BJ1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "6-[(3-chloranyl-4-fluoranyl-phenyl)methylsulfanyl]-9~{H}-purine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BJ1 "Create component" 2024-12-09 RCSB A1BJ1 "Initial release" 2025-08-20 RCSB #