data_A1BJ8 # _chem_comp.id A1BJ8 _chem_comp.name "(5S)-5-{[(5,6-dimethyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}-4,4-dimethylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H21 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-09 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BJ8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HQ9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BJ8 N2 N1 N 0 1 N N N N N N -42.712 -30.846 2.141 -2.493 1.339 -0.191 N2 A1BJ8 1 A1BJ8 C3 C1 C 0 1 Y N N N N N -47.812 -29.215 4.726 2.800 1.170 0.350 C3 A1BJ8 2 A1BJ8 C6 C2 C 0 1 Y N N N N N -45.132 -29.165 4.143 1.071 -0.810 0.027 C6 A1BJ8 3 A1BJ8 C9 C3 C 0 1 N N N N N N -43.481 -32.048 2.255 -3.485 1.227 -1.090 C9 A1BJ8 4 A1BJ8 C12 C4 C 0 1 N N N N N N -45.466 -30.143 -0.306 -3.763 -1.987 0.695 C12 A1BJ8 5 A1BJ8 C14 C5 C 0 1 Y N N N N N -43.920 -29.147 6.127 2.112 -2.762 -0.626 C14 A1BJ8 6 A1BJ8 C1 C6 C 0 1 N N N N N N -49.787 -29.260 6.604 5.043 2.341 0.392 C1 A1BJ8 7 A1BJ8 C10 C7 C 0 1 N N N N N N -44.625 -31.979 1.253 -4.271 -0.042 -0.842 C10 A1BJ8 8 A1BJ8 C11 C8 C 0 1 N N N N N N -44.217 -30.883 0.245 -3.867 -0.465 0.589 C11 A1BJ8 9 A1BJ8 C13 C9 C 0 1 N N N N N N -43.423 -31.508 -0.905 -4.843 0.088 1.629 C13 A1BJ8 10 A1BJ8 C15 C10 C 0 1 Y N N N N N -46.142 -29.188 6.265 3.463 -0.929 -0.297 C15 A1BJ8 11 A1BJ8 C2 C11 C 0 1 Y N N N N N -48.390 -29.226 6.011 4.133 1.158 0.184 C2 A1BJ8 12 A1BJ8 C4 C12 C 0 1 N N N N N N -48.616 -29.231 3.486 1.957 2.348 0.765 C4 A1BJ8 13 A1BJ8 C5 C13 C 0 1 Y N N N N N -46.370 -29.189 4.872 2.324 -0.178 0.045 C5 A1BJ8 14 A1BJ8 C7 C14 C 0 1 N N N N N N -44.056 -28.752 1.819 -1.378 -0.791 0.330 C7 A1BJ8 15 A1BJ8 C8 C15 C 0 1 N N S N N N -43.277 -29.955 1.127 -2.476 0.196 0.730 C8 A1BJ8 16 A1BJ8 N1 N2 N 0 1 N N N N N N -45.152 -29.160 2.709 -0.079 -0.114 0.355 N1 A1BJ8 17 A1BJ8 N3 N3 N 0 1 Y N N N N N -43.914 -29.136 4.761 1.016 -2.094 -0.312 N3 A1BJ8 18 A1BJ8 N4 N4 N 0 1 Y N N N N N -44.976 -29.164 6.943 3.306 -2.211 -0.623 N4 A1BJ8 19 A1BJ8 N5 N5 N 0 1 Y N N N N N -47.381 -29.211 6.975 4.541 -0.093 -0.203 N5 A1BJ8 20 A1BJ8 O1 O1 O 0 1 N N N N N N -43.257 -32.966 3.019 -3.717 2.026 -1.972 O1 A1BJ8 21 A1BJ8 H11 H1 H 0 1 N N N N N N -41.897 -30.642 2.683 -1.865 2.078 -0.157 H11 A1BJ8 22 A1BJ8 H15 H2 H 0 1 N N N N N N -46.028 -29.699 0.529 -3.344 -2.257 1.664 H15 A1BJ8 23 A1BJ8 H14 H3 H 0 1 N N N N N N -45.146 -29.349 -0.997 -4.755 -2.427 0.592 H14 A1BJ8 24 A1BJ8 H16 H4 H 0 1 N N N N N N -46.109 -30.857 -0.841 -3.115 -2.363 -0.098 H16 A1BJ8 25 A1BJ8 H20 H5 H 0 1 N N N N N N -42.952 -29.141 6.605 2.023 -3.804 -0.896 H20 A1BJ8 26 A1BJ8 H2 H6 H 0 1 N N N N N N -50.101 -30.305 6.743 5.383 2.360 1.428 H2 A1BJ8 27 A1BJ8 H3 H7 H 0 1 N N N N N N -49.785 -28.745 7.576 5.904 2.258 -0.271 H3 A1BJ8 28 A1BJ8 H4 H8 H 0 1 N N N N N N -50.487 -28.754 5.923 4.501 3.260 0.171 H4 A1BJ8 29 A1BJ8 H13 H9 H 0 1 N N N N N N -45.564 -31.708 1.758 -5.341 0.156 -0.894 H13 A1BJ8 30 A1BJ8 H12 H10 H 0 1 N N N N N N -44.749 -32.945 0.742 -3.991 -0.811 -1.562 H12 A1BJ8 31 A1BJ8 H18 H11 H 0 1 N N N N N N -42.542 -32.029 -0.502 -4.488 -0.161 2.629 H18 A1BJ8 32 A1BJ8 H19 H12 H 0 1 N N N N N N -44.060 -32.227 -1.442 -4.910 1.171 1.526 H19 A1BJ8 33 A1BJ8 H17 H13 H 0 1 N N N N N N -43.097 -30.718 -1.597 -5.828 -0.352 1.473 H17 A1BJ8 34 A1BJ8 H6 H14 H 0 1 N N N N N N -48.796 -30.272 3.179 1.870 2.368 1.851 H6 A1BJ8 35 A1BJ8 H5 H15 H 0 1 N N N N N N -49.579 -28.730 3.667 2.427 3.270 0.421 H5 A1BJ8 36 A1BJ8 H7 H16 H 0 1 N N N N N N -48.072 -28.703 2.689 0.965 2.259 0.322 H7 A1BJ8 37 A1BJ8 H9 H17 H 0 1 N N N N N N -43.333 -28.171 2.410 -1.366 -1.625 1.032 H9 A1BJ8 38 A1BJ8 H10 H18 H 0 1 N N N N N N -44.477 -28.116 1.027 -1.573 -1.165 -0.675 H10 A1BJ8 39 A1BJ8 H1 H19 H 0 1 N N N N N N -42.482 -29.543 0.488 -2.322 0.537 1.754 H1 A1BJ8 40 A1BJ8 H8 H20 H 0 1 N N N N N N -45.920 -28.569 2.462 -0.025 0.823 0.601 H8 A1BJ8 41 A1BJ8 H21 H21 H 0 1 N N N N N N -47.502 -29.215 7.968 5.460 -0.347 -0.383 H21 A1BJ8 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BJ8 C13 C11 SING N N 1 A1BJ8 C12 C11 SING N N 2 A1BJ8 C11 C8 SING N N 3 A1BJ8 C11 C10 SING N N 4 A1BJ8 C8 C7 SING N N 5 A1BJ8 C8 N2 SING N N 6 A1BJ8 C10 C9 SING N N 7 A1BJ8 C7 N1 SING N N 8 A1BJ8 N2 C9 SING N N 9 A1BJ8 C9 O1 DOUB N N 10 A1BJ8 N1 C6 SING N N 11 A1BJ8 C4 C3 SING N N 12 A1BJ8 C6 N3 DOUB Y N 13 A1BJ8 C6 C5 SING Y N 14 A1BJ8 C3 C5 SING Y N 15 A1BJ8 C3 C2 DOUB Y N 16 A1BJ8 N3 C14 SING Y N 17 A1BJ8 C5 C15 DOUB Y N 18 A1BJ8 C2 C1 SING N N 19 A1BJ8 C2 N5 SING Y N 20 A1BJ8 C14 N4 DOUB Y N 21 A1BJ8 C15 N4 SING Y N 22 A1BJ8 C15 N5 SING Y N 23 A1BJ8 N2 H11 SING N N 24 A1BJ8 C12 H15 SING N N 25 A1BJ8 C12 H14 SING N N 26 A1BJ8 C12 H16 SING N N 27 A1BJ8 C14 H20 SING N N 28 A1BJ8 C1 H2 SING N N 29 A1BJ8 C1 H3 SING N N 30 A1BJ8 C1 H4 SING N N 31 A1BJ8 C10 H13 SING N N 32 A1BJ8 C10 H12 SING N N 33 A1BJ8 C13 H18 SING N N 34 A1BJ8 C13 H19 SING N N 35 A1BJ8 C13 H17 SING N N 36 A1BJ8 C4 H6 SING N N 37 A1BJ8 C4 H5 SING N N 38 A1BJ8 C4 H7 SING N N 39 A1BJ8 C7 H9 SING N N 40 A1BJ8 C7 H10 SING N N 41 A1BJ8 C8 H1 SING N N 42 A1BJ8 N1 H8 SING N N 43 A1BJ8 N5 H21 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BJ8 SMILES ACDLabs 14.52 "Cc1c2c(ncnc2[NH]c1C)NCC1NC(=O)CC1(C)C" A1BJ8 InChI InChI 1.06 "InChI=1S/C15H21N5O/c1-8-9(2)19-14-12(8)13(17-7-18-14)16-6-10-15(3,4)5-11(21)20-10/h7,10H,5-6H2,1-4H3,(H,20,21)(H2,16,17,18,19)/t10-/m1/s1" A1BJ8 InChIKey InChI 1.06 QNWPQRVMXMTFFK-SNVBAGLBSA-N A1BJ8 SMILES_CANONICAL CACTVS 3.385 "Cc1[nH]c2ncnc(NC[C@H]3NC(=O)CC3(C)C)c2c1C" A1BJ8 SMILES CACTVS 3.385 "Cc1[nH]c2ncnc(NC[CH]3NC(=O)CC3(C)C)c2c1C" A1BJ8 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c2c1c(ncn2)NC[C@@H]3C(CC(=O)N3)(C)C)C" A1BJ8 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c2c1c(ncn2)NCC3C(CC(=O)N3)(C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BJ8 "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-5-{[(5,6-dimethyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}-4,4-dimethylpyrrolidin-2-one" A1BJ8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-5-[[(5,6-dimethyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl]-4,4-dimethyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BJ8 "Create component" 2024-12-09 RCSB A1BJ8 "Initial release" 2025-08-20 RCSB #