data_A1BJV # _chem_comp.id A1BJV _chem_comp.name "(4R)-4-{[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]methyl}-1-propylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-09 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BJV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HQM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BJV N2 N1 N 0 1 N N N N N N -45.226 -29.275 2.635 -0.010 -0.798 -0.190 N2 A1BJV 1 A1BJV C3 C1 C 0 1 N N N N N N -45.858 -33.358 1.156 6.147 -0.007 0.083 C3 A1BJV 2 A1BJV C6 C2 C 0 1 N N N N N N -44.004 -29.149 1.814 1.321 -1.409 -0.217 C6 A1BJV 3 A1BJV C9 C3 C 0 1 Y N N N N N -46.250 -29.179 6.161 -3.527 -1.879 0.062 C9 A1BJV 4 A1BJV C12 C4 C 0 1 Y N N N N N -48.663 -28.989 3.411 -2.343 1.599 -0.214 C12 A1BJV 5 A1BJV C14 C5 C 0 1 Y N N N N N -50.581 -28.868 4.861 -4.510 2.625 -0.164 C14 A1BJV 6 A1BJV C17 C6 C 0 1 N N N N N N -42.894 -31.392 2.347 2.525 0.472 0.983 C17 A1BJV 7 A1BJV C1 C7 C 0 1 N N N N N N -46.666 -35.217 -0.410 8.044 1.022 -1.177 C1 A1BJV 8 A1BJV C10 C8 C 0 1 Y N N N N N -46.419 -29.172 4.756 -2.415 -1.030 -0.049 C10 A1BJV 9 A1BJV C11 C9 C 0 1 Y N N N N N -47.831 -29.056 4.524 -2.939 0.344 -0.105 C11 A1BJV 10 A1BJV C13 C10 C 0 1 Y N N N N N -50.031 -28.878 3.574 -3.128 2.731 -0.243 C13 A1BJV 11 A1BJV C15 C11 C 0 1 Y N N N N N -49.809 -28.931 6.019 -5.113 1.388 -0.055 C15 A1BJV 12 A1BJV C16 C12 C 0 1 Y N N N N N -48.447 -29.011 5.805 -4.336 0.235 -0.026 C16 A1BJV 13 A1BJV C18 C13 C 0 1 N N N N N N -43.861 -32.514 2.430 4.006 0.760 1.086 C18 A1BJV 14 A1BJV C2 C14 C 0 1 N N N N N N -45.490 -34.364 0.040 6.523 0.995 -1.010 C2 A1BJV 15 A1BJV C4 C15 C 0 1 N N N N N N -44.501 -31.251 0.542 3.792 -0.925 -0.498 C4 A1BJV 16 A1BJV C5 C16 C 0 1 N N R N N N -43.402 -30.439 1.253 2.382 -0.313 -0.341 C5 A1BJV 17 A1BJV C7 C17 C 0 1 Y N N N N N -45.237 -29.268 4.021 -1.135 -1.596 -0.081 C7 A1BJV 18 A1BJV C8 C18 C 0 1 Y N N N N N -44.015 -29.355 6.004 -2.097 -3.684 0.097 C8 A1BJV 19 A1BJV F1 F1 F 0 1 N N N N N N -51.903 -28.798 4.957 -5.271 3.741 -0.193 F1 A1BJV 20 A1BJV N1 N2 N 0 1 N N N N N N -44.770 -32.403 1.388 4.691 -0.032 0.243 N1 A1BJV 21 A1BJV N3 N3 N 0 1 Y N N N N N -44.021 -29.348 4.654 -1.026 -2.921 -0.006 N3 A1BJV 22 A1BJV N4 N4 N 0 1 Y N N N N N -45.069 -29.271 6.831 -3.318 -3.194 0.126 N4 A1BJV 23 A1BJV N5 N5 N 0 1 Y N N N N N -47.469 -29.088 6.805 -4.663 -1.107 0.074 N5 A1BJV 24 A1BJV O1 O1 O 0 1 N N N N N N -43.862 -33.382 3.279 4.504 1.585 1.822 O1 A1BJV 25 A1BJV H13 H1 H 0 1 N N N N N N -45.818 -28.519 2.356 -0.103 0.166 -0.244 H13 A1BJV 26 A1BJV H7 H2 H 0 1 N N N N N N -46.762 -32.807 0.858 6.499 -0.999 -0.197 H7 A1BJV 27 A1BJV H8 H3 H 0 1 N N N N N N -46.055 -33.910 2.087 6.610 0.292 1.024 H8 A1BJV 28 A1BJV H11 H4 H 0 1 N N N N N N -43.235 -28.669 2.437 1.483 -1.968 0.705 H11 A1BJV 29 A1BJV H12 H5 H 0 1 N N N N N N -44.244 -28.498 0.961 1.394 -2.084 -1.069 H12 A1BJV 30 A1BJV H15 H6 H 0 1 N N N N N N -48.239 -29.024 2.418 -1.268 1.684 -0.275 H15 A1BJV 31 A1BJV H19 H7 H 0 1 N N N N N N -41.896 -31.772 2.083 2.195 -0.137 1.825 H19 A1BJV 32 A1BJV H20 H8 H 0 1 N N N N N N -42.842 -30.866 3.312 1.957 1.401 0.941 H20 A1BJV 33 A1BJV H3 H9 H 0 1 N N N N N N -46.338 -35.907 -1.201 8.507 1.320 -0.236 H3 A1BJV 34 A1BJV H2 H10 H 0 1 N N N N N N -47.048 -35.794 0.445 8.396 0.029 -1.457 H2 A1BJV 35 A1BJV H4 H11 H 0 1 N N N N N N -47.463 -34.566 -0.799 8.312 1.735 -1.956 H4 A1BJV 36 A1BJV H16 H12 H 0 1 N N N N N N -50.674 -28.799 2.710 -2.666 3.703 -0.328 H16 A1BJV 37 A1BJV H17 H13 H 0 1 N N N N N N -50.242 -28.918 7.008 -6.189 1.316 0.006 H17 A1BJV 38 A1BJV H5 H14 H 0 1 N N N N N N -44.699 -35.030 0.416 6.060 0.697 -1.951 H5 A1BJV 39 A1BJV H6 H15 H 0 1 N N N N N N -45.114 -33.802 -0.827 6.171 1.988 -0.730 H6 A1BJV 40 A1BJV H9 H16 H 0 1 N N N N N N -45.410 -30.642 0.427 3.819 -1.927 -0.070 H9 A1BJV 41 A1BJV H10 H17 H 0 1 N N N N N N -44.152 -31.579 -0.448 4.075 -0.956 -1.550 H10 A1BJV 42 A1BJV H1 H18 H 0 1 N N N N N N -42.590 -30.205 0.549 2.153 0.356 -1.170 H1 A1BJV 43 A1BJV H14 H19 H 0 1 N N N N N N -43.047 -29.438 6.475 -1.967 -4.755 0.151 H14 A1BJV 44 A1BJV H18 H20 H 0 1 N N N N N N -47.623 -29.079 7.793 -5.567 -1.454 0.138 H18 A1BJV 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BJV C1 C2 SING N N 1 A1BJV C2 C3 SING N N 2 A1BJV C4 C5 SING N N 3 A1BJV C4 N1 SING N N 4 A1BJV C3 N1 SING N N 5 A1BJV C5 C6 SING N N 6 A1BJV C5 C17 SING N N 7 A1BJV N1 C18 SING N N 8 A1BJV C6 N2 SING N N 9 A1BJV C17 C18 SING N N 10 A1BJV C18 O1 DOUB N N 11 A1BJV N2 C7 SING N N 12 A1BJV C12 C13 DOUB Y N 13 A1BJV C12 C11 SING Y N 14 A1BJV C13 C14 SING Y N 15 A1BJV C7 N3 DOUB Y N 16 A1BJV C7 C10 SING Y N 17 A1BJV C11 C10 SING Y N 18 A1BJV C11 C16 DOUB Y N 19 A1BJV N3 C8 SING Y N 20 A1BJV C10 C9 DOUB Y N 21 A1BJV C14 F1 SING N N 22 A1BJV C14 C15 DOUB Y N 23 A1BJV C16 C15 SING Y N 24 A1BJV C16 N5 SING Y N 25 A1BJV C8 N4 DOUB Y N 26 A1BJV C9 N5 SING Y N 27 A1BJV C9 N4 SING Y N 28 A1BJV N2 H13 SING N N 29 A1BJV C3 H7 SING N N 30 A1BJV C3 H8 SING N N 31 A1BJV C6 H11 SING N N 32 A1BJV C6 H12 SING N N 33 A1BJV C12 H15 SING N N 34 A1BJV C17 H19 SING N N 35 A1BJV C17 H20 SING N N 36 A1BJV C1 H3 SING N N 37 A1BJV C1 H2 SING N N 38 A1BJV C1 H4 SING N N 39 A1BJV C13 H16 SING N N 40 A1BJV C15 H17 SING N N 41 A1BJV C2 H5 SING N N 42 A1BJV C2 H6 SING N N 43 A1BJV C4 H9 SING N N 44 A1BJV C4 H10 SING N N 45 A1BJV C5 H1 SING N N 46 A1BJV C8 H14 SING N N 47 A1BJV N5 H18 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BJV SMILES ACDLabs 14.52 "CCCN1CC(CNc2ncnc3[NH]c4cc(F)ccc4c32)CC1=O" A1BJV InChI InChI 1.06 "InChI=1S/C18H20FN5O/c1-2-5-24-9-11(6-15(24)25)8-20-17-16-13-4-3-12(19)7-14(13)23-18(16)22-10-21-17/h3-4,7,10-11H,2,5-6,8-9H2,1H3,(H2,20,21,22,23)/t11-/m1/s1" A1BJV InChIKey InChI 1.06 MNKFCTCNHUFHIW-LLVKDONJSA-N A1BJV SMILES_CANONICAL CACTVS 3.385 "CCCN1C[C@@H](CNc2ncnc3[nH]c4cc(F)ccc4c23)CC1=O" A1BJV SMILES CACTVS 3.385 "CCCN1C[CH](CNc2ncnc3[nH]c4cc(F)ccc4c23)CC1=O" A1BJV SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCCN1C[C@H](CC1=O)CNc2c3c4ccc(cc4[nH]c3ncn2)F" A1BJV SMILES "OpenEye OEToolkits" 3.1.0.0 "CCCN1CC(CC1=O)CNc2c3c4ccc(cc4[nH]c3ncn2)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BJV "SYSTEMATIC NAME" ACDLabs 14.52 "(4R)-4-{[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]methyl}-1-propylpyrrolidin-2-one" A1BJV "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(4~{R})-4-[[(7-fluoranyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]methyl]-1-propyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BJV "Create component" 2024-12-09 RCSB A1BJV "Initial release" 2025-08-20 RCSB #