data_A1BKA # _chem_comp.id A1BKA _chem_comp.name "9-fluoro-4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-2,3,4,5-tetrahydro-1,4-benzoxazepine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H13 F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-09 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 284.288 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BKA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HPT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BKA N2 N1 N 0 1 Y N N N N N -44.415 -29.608 4.417 -1.921 -1.673 0.707 N2 A1BKA 1 A1BKA C3 C1 C 0 1 Y N N N N N -43.342 -26.204 0.319 3.693 -1.783 -1.301 C3 A1BKA 2 A1BKA C6 C2 C 0 1 Y N N N N N -45.608 -27.844 0.237 2.732 0.209 0.360 C6 A1BKA 3 A1BKA C9 C3 C 0 1 Y N N N N N -45.642 -29.675 3.848 -1.613 -0.472 0.226 C9 A1BKA 4 A1BKA C12 C4 C 0 1 Y N N N N N -46.801 -29.415 4.696 -2.652 0.339 -0.256 C12 A1BKA 5 A1BKA C14 C5 C 0 1 Y N N N N N -48.745 -29.009 5.924 -4.034 1.902 -1.106 C14 A1BKA 6 A1BKA C1 C6 C 0 1 Y N N N N N -45.540 -26.582 -0.351 3.997 0.327 -0.202 C1 A1BKA 7 A1BKA C10 C7 C 0 1 Y N N N N N -44.253 -29.311 5.756 -3.172 -2.095 0.734 C10 A1BKA 8 A1BKA C11 C8 C 0 1 Y N N N N N -46.479 -29.118 6.066 -3.969 -0.153 -0.208 C11 A1BKA 9 A1BKA C13 C9 C 0 1 Y N N N N N -48.274 -29.340 4.658 -2.736 1.674 -0.845 C13 A1BKA 10 A1BKA C15 C10 C 0 1 N N N N N N -44.592 -29.748 1.529 0.603 -1.048 0.754 C15 A1BKA 11 A1BKA C2 C11 C 0 1 Y N N N N N -44.447 -25.756 -0.320 4.475 -0.675 -1.028 C2 A1BKA 12 A1BKA C4 C12 C 0 1 Y N N N N N -43.338 -27.477 0.926 2.432 -1.897 -0.743 C4 A1BKA 13 A1BKA C5 C13 C 0 1 Y N N N N N -44.461 -28.346 0.894 1.960 -0.904 0.093 C5 A1BKA 14 A1BKA C7 C14 C 0 1 N N N N N N -47.593 -28.933 1.177 1.153 1.952 0.578 C7 A1BKA 15 A1BKA C8 C15 C 0 1 N N N N N N -47.036 -30.229 1.851 -0.169 1.259 0.868 C8 A1BKA 16 A1BKA F1 F1 F 0 1 N N N N N N -46.612 -26.075 -1.011 4.761 1.409 0.065 F1 A1BKA 17 A1BKA N1 N2 N 0 1 N N N N N N -45.724 -30.040 2.422 -0.301 -0.033 0.200 N1 A1BKA 18 A1BKA N3 N3 N 0 1 Y N N N N N -45.229 -29.063 6.620 -4.177 -1.370 0.293 N3 A1BKA 19 A1BKA N4 N4 N 0 1 Y N N N N N -47.647 -28.897 6.742 -4.781 0.817 -0.729 N4 A1BKA 20 A1BKA O1 O1 O 0 1 N N N N N N -46.824 -28.533 0.066 2.236 1.205 1.146 O1 A1BKA 21 A1BKA H2 H1 H 0 1 N N N N N N -42.459 -25.584 0.365 4.065 -2.557 -1.954 H2 A1BKA 22 A1BKA H10 H2 H 0 1 N N N N N N -49.777 -28.867 6.210 -4.429 2.806 -1.546 H10 A1BKA 23 A1BKA H8 H3 H 0 1 N N N N N N -43.242 -29.278 6.134 -3.378 -3.077 1.134 H8 A1BKA 24 A1BKA H9 H4 H 0 1 N N N N N N -48.888 -29.514 3.787 -1.913 2.348 -1.033 H9 A1BKA 25 A1BKA H13 H5 H 0 1 N N N N N N -44.644 -30.470 0.701 0.203 -2.042 0.555 H13 A1BKA 26 A1BKA H12 H6 H 0 1 N N N N N N -43.674 -29.922 2.110 0.703 -0.900 1.829 H12 A1BKA 27 A1BKA H1 H7 H 0 1 N N N N N N -44.467 -24.783 -0.788 5.461 -0.592 -1.461 H1 A1BKA 28 A1BKA H3 H8 H 0 1 N N N N N N -42.444 -27.805 1.436 1.819 -2.760 -0.959 H3 A1BKA 29 A1BKA H5 H9 H 0 1 N N N N N N -47.592 -28.121 1.919 1.281 2.043 -0.501 H5 A1BKA 30 A1BKA H4 H10 H 0 1 N N N N N N -48.624 -29.123 0.843 1.142 2.947 1.023 H4 A1BKA 31 A1BKA H6 H11 H 0 1 N N N N N N -47.727 -30.535 2.650 -0.255 1.110 1.944 H6 A1BKA 32 A1BKA H7 H12 H 0 1 N N N N N N -46.979 -31.023 1.092 -0.981 1.908 0.542 H7 A1BKA 33 A1BKA H11 H13 H 0 1 N N N N N N -47.696 -28.680 7.717 -5.744 0.746 -0.819 H11 A1BKA 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BKA F1 C1 SING N N 1 A1BKA C1 C2 DOUB Y N 2 A1BKA C1 C6 SING Y N 3 A1BKA C2 C3 SING Y N 4 A1BKA O1 C6 SING N N 5 A1BKA O1 C7 SING N N 6 A1BKA C6 C5 DOUB Y N 7 A1BKA C3 C4 DOUB Y N 8 A1BKA C5 C4 SING Y N 9 A1BKA C5 C15 SING N N 10 A1BKA C7 C8 SING N N 11 A1BKA C15 N1 SING N N 12 A1BKA C8 N1 SING N N 13 A1BKA N1 C9 SING N N 14 A1BKA C9 N2 DOUB Y N 15 A1BKA C9 C12 SING Y N 16 A1BKA N2 C10 SING Y N 17 A1BKA C13 C12 SING Y N 18 A1BKA C13 C14 DOUB Y N 19 A1BKA C12 C11 DOUB Y N 20 A1BKA C10 N3 DOUB Y N 21 A1BKA C14 N4 SING Y N 22 A1BKA C11 N3 SING Y N 23 A1BKA C11 N4 SING Y N 24 A1BKA C3 H2 SING N N 25 A1BKA C14 H10 SING N N 26 A1BKA C10 H8 SING N N 27 A1BKA C13 H9 SING N N 28 A1BKA C15 H13 SING N N 29 A1BKA C15 H12 SING N N 30 A1BKA C2 H1 SING N N 31 A1BKA C4 H3 SING N N 32 A1BKA C7 H5 SING N N 33 A1BKA C7 H4 SING N N 34 A1BKA C8 H6 SING N N 35 A1BKA C8 H7 SING N N 36 A1BKA N4 H11 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BKA SMILES ACDLabs 14.52 "Fc1cccc2CN(CCOc12)c1ncnc2[NH]ccc21" A1BKA InChI InChI 1.06 "InChI=1S/C15H13FN4O/c16-12-3-1-2-10-8-20(6-7-21-13(10)12)15-11-4-5-17-14(11)18-9-19-15/h1-5,9H,6-8H2,(H,17,18,19)" A1BKA InChIKey InChI 1.06 YIMUKKUCNVULRT-UHFFFAOYSA-N A1BKA SMILES_CANONICAL CACTVS 3.385 "Fc1cccc2CN(CCOc12)c3ncnc4[nH]ccc34" A1BKA SMILES CACTVS 3.385 "Fc1cccc2CN(CCOc12)c3ncnc4[nH]ccc34" A1BKA SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(c(c1)F)OCCN(C2)c3c4cc[nH]c4ncn3" A1BKA SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(c(c1)F)OCCN(C2)c3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BKA "SYSTEMATIC NAME" ACDLabs 14.52 "9-fluoro-4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-2,3,4,5-tetrahydro-1,4-benzoxazepine" A1BKA "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "9-fluoranyl-4-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-3,5-dihydro-2~{H}-1,4-benzoxazepine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BKA "Create component" 2024-12-09 RCSB A1BKA "Initial release" 2025-08-20 RCSB #