data_A1BKH # _chem_comp.id A1BKH _chem_comp.name "(1R,2S)-2-[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]-N-methylcyclohexane-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-09 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BKH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HQ5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BKH N2 N1 N 0 1 N N N N N N -45.477 -29.148 2.386 -1.049 -0.545 0.268 N2 A1BKH 1 A1BKH C3 C1 C 0 1 N N R N N N -45.104 -28.954 -0.098 -3.338 0.311 0.184 C3 A1BKH 2 A1BKH C6 C2 C 0 1 N N N N N N -44.653 -31.674 -0.003 -2.420 -0.582 2.818 C6 A1BKH 3 A1BKH C9 C3 C 0 1 Y N N N N N -45.397 -29.212 3.775 -0.099 -1.470 -0.129 C9 A1BKH 4 A1BKH C12 C4 C 0 1 Y N N N N N -46.591 -29.162 4.537 1.255 -1.122 -0.197 C12 A1BKH 5 A1BKH C14 C5 C 0 1 Y N N N N N -48.922 -29.005 3.329 1.671 1.385 0.496 C14 A1BKH 6 A1BKH C17 C6 C 0 1 Y N N N N N -49.951 -29.025 5.979 4.336 0.776 -0.022 C17 A1BKH 7 A1BKH C1 C7 C 0 1 N N N N N N -45.359 -25.074 -0.588 -3.461 2.687 -2.816 C1 A1BKH 8 A1BKH C10 C8 C 0 1 Y N N N N N -44.151 -29.329 5.768 0.453 -3.598 -0.826 C10 A1BKH 9 A1BKH C11 C9 C 0 1 Y N N N N N -46.377 -29.209 5.929 2.183 -2.093 -0.604 C11 A1BKH 10 A1BKH C13 C10 C 0 1 Y N N N N N -48.006 -29.077 4.369 2.021 0.105 0.071 C13 A1BKH 11 A1BKH C15 C11 C 0 1 Y N N N N N -50.282 -28.933 3.567 2.646 2.344 0.658 C15 A1BKH 12 A1BKH C16 C12 C 0 1 Y N N N N N -50.801 -28.951 4.872 3.976 2.040 0.399 C16 A1BKH 13 A1BKH C18 C13 C 0 1 Y N N N N N -48.595 -29.078 5.664 3.365 -0.205 -0.191 C18 A1BKH 14 A1BKH C2 C14 C 0 1 N N N N N N -45.650 -27.514 -0.033 -3.064 0.950 -1.154 C2 A1BKH 15 A1BKH C4 C15 C 0 1 N N N N N N -46.180 -29.886 -0.741 -3.020 1.308 1.299 C4 A1BKH 16 A1BKH C5 C16 C 0 1 N N N N N N -46.084 -31.350 -0.353 -3.299 0.660 2.657 C5 A1BKH 17 A1BKH C7 C17 C 0 1 N N N N N N -44.266 -30.986 1.286 -2.738 -1.580 1.702 C7 A1BKH 18 A1BKH C8 C18 C 0 1 N N S N N N -44.512 -29.468 1.307 -2.460 -0.931 0.345 C8 A1BKH 19 A1BKH F1 F1 F 0 1 N N N N N N -52.092 -28.898 5.046 4.924 2.988 0.561 F1 A1BKH 20 A1BKH N1 N2 N 0 1 N N N N N N -44.917 -26.465 -0.605 -3.727 2.066 -1.516 N1 A1BKH 21 A1BKH N3 N3 N 0 1 Y N N N N N -44.166 -29.287 4.395 -0.451 -2.713 -0.449 N3 A1BKH 22 A1BKH N4 N4 N 0 1 Y N N N N N -45.202 -29.297 6.602 1.734 -3.311 -0.909 N4 A1BKH 23 A1BKH N5 N5 N 0 1 Y N N N N N -47.588 -29.159 6.644 3.435 -1.528 -0.594 N5 A1BKH 24 A1BKH O1 O1 O 0 1 N N N N N N -46.724 -27.243 0.507 -2.247 0.459 -1.904 O1 A1BKH 25 A1BKH H15 H1 H 0 1 N N N N N N -45.711 -28.191 2.211 -0.780 0.358 0.498 H15 A1BKH 26 A1BKH H1 H2 H 0 1 N N N N N N -44.253 -28.936 -0.795 -4.388 0.024 0.241 H1 A1BKH 27 A1BKH H12 H3 H 0 1 N N N N N N -44.545 -32.762 0.119 -1.370 -0.295 2.761 H12 A1BKH 28 A1BKH H11 H4 H 0 1 N N N N N N -43.993 -31.328 -0.812 -2.618 -1.044 3.786 H11 A1BKH 29 A1BKH H17 H5 H 0 1 N N N N N N -48.564 -29.005 2.310 0.637 1.624 0.698 H17 A1BKH 30 A1BKH H19 H6 H 0 1 N N N N N N -50.316 -29.040 6.995 5.373 0.548 -0.222 H19 A1BKH 31 A1BKH H4 H7 H 0 1 N N N N N N -44.614 -24.446 -1.098 -4.087 3.572 -2.931 H4 A1BKH 32 A1BKH H5 H8 H 0 1 N N N N N N -46.326 -24.990 -1.106 -2.411 2.974 -2.873 H5 A1BKH 33 A1BKH H3 H9 H 0 1 N N N N N N -45.471 -24.738 0.453 -3.688 1.976 -3.611 H3 A1BKH 34 A1BKH H16 H10 H 0 1 N N N N N N -43.178 -29.396 6.231 0.127 -4.595 -1.082 H16 A1BKH 35 A1BKH H18 H11 H 0 1 N N N N N N -50.961 -28.861 2.730 2.375 3.337 0.988 H18 A1BKH 36 A1BKH H8 H12 H 0 1 N N N N N N -46.080 -29.817 -1.834 -1.971 1.596 1.242 H8 A1BKH 37 A1BKH H7 H13 H 0 1 N N N N N N -47.172 -29.519 -0.439 -3.646 2.193 1.185 H7 A1BKH 38 A1BKH H10 H14 H 0 1 N N N N N N -46.729 -31.544 0.517 -4.348 0.373 2.714 H10 A1BKH 39 A1BKH H9 H15 H 0 1 N N N N N N -46.408 -31.977 -1.197 -3.072 1.370 3.452 H9 A1BKH 40 A1BKH H14 H16 H 0 1 N N N N N N -44.848 -31.438 2.103 -2.112 -2.465 1.817 H14 A1BKH 41 A1BKH H13 H17 H 0 1 N N N N N N -43.194 -31.161 1.459 -3.788 -1.867 1.760 H13 A1BKH 42 A1BKH H2 H18 H 0 1 N N N N N N -43.559 -28.950 1.491 -2.686 -1.642 -0.451 H2 A1BKH 43 A1BKH H6 H19 H 0 1 N N N N N N -44.047 -26.681 -1.047 -4.381 2.458 -0.916 H6 A1BKH 44 A1BKH H20 H20 H 0 1 N N N N N N -47.708 -29.177 7.637 4.253 -1.991 -0.836 H20 A1BKH 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BKH C4 C5 SING N N 1 A1BKH C4 C3 SING N N 2 A1BKH N1 C1 SING N N 3 A1BKH N1 C2 SING N N 4 A1BKH C5 C6 SING N N 5 A1BKH C3 C2 SING N N 6 A1BKH C3 C8 SING N N 7 A1BKH C2 O1 DOUB N N 8 A1BKH C6 C7 SING N N 9 A1BKH C7 C8 SING N N 10 A1BKH C8 N2 SING N N 11 A1BKH N2 C9 SING N N 12 A1BKH C14 C15 DOUB Y N 13 A1BKH C14 C13 SING Y N 14 A1BKH C15 C16 SING Y N 15 A1BKH C9 N3 DOUB Y N 16 A1BKH C9 C12 SING Y N 17 A1BKH C13 C12 SING Y N 18 A1BKH C13 C18 DOUB Y N 19 A1BKH N3 C10 SING Y N 20 A1BKH C12 C11 DOUB Y N 21 A1BKH C16 F1 SING N N 22 A1BKH C16 C17 DOUB Y N 23 A1BKH C18 C17 SING Y N 24 A1BKH C18 N5 SING Y N 25 A1BKH C10 N4 DOUB Y N 26 A1BKH C11 N4 SING Y N 27 A1BKH C11 N5 SING Y N 28 A1BKH N2 H15 SING N N 29 A1BKH C3 H1 SING N N 30 A1BKH C6 H12 SING N N 31 A1BKH C6 H11 SING N N 32 A1BKH C14 H17 SING N N 33 A1BKH C17 H19 SING N N 34 A1BKH C1 H4 SING N N 35 A1BKH C1 H5 SING N N 36 A1BKH C1 H3 SING N N 37 A1BKH C10 H16 SING N N 38 A1BKH C15 H18 SING N N 39 A1BKH C4 H8 SING N N 40 A1BKH C4 H7 SING N N 41 A1BKH C5 H10 SING N N 42 A1BKH C5 H9 SING N N 43 A1BKH C7 H14 SING N N 44 A1BKH C7 H13 SING N N 45 A1BKH C8 H2 SING N N 46 A1BKH N1 H6 SING N N 47 A1BKH N5 H20 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BKH SMILES ACDLabs 14.52 "CNC(=O)C1CCCCC1Nc1ncnc2[NH]c3cc(F)ccc3c12" A1BKH InChI InChI 1.06 "InChI=1S/C18H20FN5O/c1-20-18(25)12-4-2-3-5-13(12)23-16-15-11-7-6-10(19)8-14(11)24-17(15)22-9-21-16/h6-9,12-13H,2-5H2,1H3,(H,20,25)(H2,21,22,23,24)/t12-,13+/m1/s1" A1BKH InChIKey InChI 1.06 ZBDNRIOHABEATK-OLZOCXBDSA-N A1BKH SMILES_CANONICAL CACTVS 3.385 "CNC(=O)[C@@H]1CCCC[C@@H]1Nc2ncnc3[nH]c4cc(F)ccc4c23" A1BKH SMILES CACTVS 3.385 "CNC(=O)[CH]1CCCC[CH]1Nc2ncnc3[nH]c4cc(F)ccc4c23" A1BKH SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CNC(=O)[C@@H]1CCCC[C@@H]1Nc2c3c4ccc(cc4[nH]c3ncn2)F" A1BKH SMILES "OpenEye OEToolkits" 3.1.0.0 "CNC(=O)C1CCCCC1Nc2c3c4ccc(cc4[nH]c3ncn2)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BKH "SYSTEMATIC NAME" ACDLabs 14.52 "(1R,2S)-2-[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]-N-methylcyclohexane-1-carboxamide" A1BKH "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{R},2~{S})-2-[(7-fluoranyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]-~{N}-methyl-cyclohexane-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BKH "Create component" 2024-12-09 RCSB A1BKH "Initial release" 2025-08-20 RCSB #