data_A1BL7 # _chem_comp.id A1BL7 _chem_comp.name "(2-[4-(pyrimidine-4-carbonyl)piperazin-1-yl]-4-{[4-(trifluoromethyl)phenyl]carbamoyl}pyrimidin-5-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H20 F3 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-17 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 515.445 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BL7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9MK0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BL7 C2 C1 C 0 1 Y N N N N N 15.423 40.720 22.946 -0.908 3.111 0.718 C2 A1BL7 1 A1BL7 C3 C2 C 0 1 Y N N N N N 15.299 41.310 21.681 0.425 2.725 0.695 C3 A1BL7 2 A1BL7 C4 C3 C 0 1 Y N N N N N 14.565 40.593 20.701 0.737 1.438 0.256 C4 A1BL7 3 A1BL7 C6 C4 C 0 1 Y N N N N N 14.157 38.881 22.278 -1.508 1.039 -0.091 C6 A1BL7 4 A1BL7 C8 C5 C 0 1 N N N N N N 13.433 37.249 24.008 -2.449 -1.087 0.261 C8 A1BL7 5 A1BL7 N10 N1 N 0 1 N N N N N N 11.020 37.484 23.799 -4.775 -1.445 -0.374 N10 A1BL7 6 A1BL7 C11 C6 C 0 1 N N N N N N 11.147 37.902 22.374 -4.889 -0.116 -0.993 C11 A1BL7 7 A1BL7 C12 C7 C 0 1 N N N N N N 12.401 37.237 21.800 -3.830 0.802 -0.373 C12 A1BL7 8 A1BL7 O14 O1 O 0 1 N N N N N N 9.040 36.496 23.483 -5.741 -3.153 0.664 O14 A1BL7 9 A1BL7 C15 C8 C 0 1 Y N N N N N 9.720 36.356 25.665 -7.187 -1.408 0.076 C15 A1BL7 10 A1BL7 C16 C9 C 0 1 Y N N N N N 9.742 37.258 26.733 -8.265 -1.917 0.801 C16 A1BL7 11 A1BL7 C17 C10 C 0 1 Y N N N N N 9.517 36.770 28.013 -9.489 -1.272 0.699 C17 A1BL7 12 A1BL7 C19 C11 C 0 1 Y N N N N N 9.234 34.659 27.149 -8.553 0.250 -0.748 C19 A1BL7 13 A1BL7 C21 C12 C 0 1 N N N N N N 14.292 41.032 19.294 2.147 0.978 0.213 C21 A1BL7 14 A1BL7 C24 C13 C 0 1 Y N N N N N 13.545 40.280 17.061 3.753 -0.735 -0.166 C24 A1BL7 15 A1BL7 C27 C14 C 0 1 Y N N N N N 12.611 40.530 14.433 6.360 -1.658 -0.072 C27 A1BL7 16 A1BL7 C30 C15 C 0 1 N N N N N N 12.074 40.644 13.027 7.779 -2.162 -0.022 C30 A1BL7 17 A1BL7 C34 C16 C 0 1 N N N N N N 15.949 42.658 21.468 1.510 3.674 1.134 C34 A1BL7 18 A1BL7 C35 C17 C 0 1 N N N N N N 17.019 42.633 20.413 2.073 4.385 -0.070 C35 A1BL7 19 A1BL7 N1 N2 N 0 1 Y N N N N N 14.862 39.541 23.194 -1.835 2.254 0.327 N1 A1BL7 20 A1BL7 N5 N3 N 0 1 Y N N N N N 14.026 39.414 21.057 -0.250 0.630 -0.124 N5 A1BL7 21 A1BL7 N7 N4 N 0 1 N N N N N N 13.593 37.630 22.580 -2.509 0.172 -0.493 N7 A1BL7 22 A1BL7 C9 C18 C 0 1 N N N N N N 12.191 37.932 24.604 -3.451 -2.083 -0.334 C9 A1BL7 23 A1BL7 C13 C19 C 0 1 N N N N N N 9.931 36.793 24.255 -5.856 -2.062 0.143 C13 A1BL7 24 A1BL7 N18 N5 N 0 1 Y N N N N N 9.268 35.482 28.178 -9.592 -0.206 -0.076 N18 A1BL7 25 A1BL7 N20 N6 N 0 1 Y N N N N N 9.443 35.077 25.919 -7.373 -0.330 -0.682 N20 A1BL7 26 A1BL7 O22 O2 O 0 1 N N N N N N 14.393 42.202 18.979 3.040 1.723 0.561 O22 A1BL7 27 A1BL7 N23 N7 N 0 1 N N N N N N 13.922 40.070 18.403 2.436 -0.268 -0.213 N23 A1BL7 28 A1BL7 C25 C20 C 0 1 Y N N N N N 13.903 41.385 16.277 4.009 -2.070 0.120 C25 A1BL7 29 A1BL7 C26 C21 C 0 1 Y N N N N N 13.438 41.502 14.980 5.311 -2.528 0.166 C26 A1BL7 30 A1BL7 C28 C22 C 0 1 Y N N N N N 12.241 39.441 15.204 6.109 -0.330 -0.362 C28 A1BL7 31 A1BL7 C29 C23 C 0 1 Y N N N N N 12.707 39.316 16.500 4.809 0.135 -0.409 C29 A1BL7 32 A1BL7 F31 F1 F 0 1 N N N N N N 10.719 40.891 13.115 8.163 -2.603 -1.293 F31 A1BL7 33 A1BL7 F32 F2 F 0 1 N N N N N N 12.614 41.721 12.339 8.627 -1.127 0.388 F32 A1BL7 34 A1BL7 F33 F3 F 0 1 N N N N N N 12.242 39.460 12.329 7.866 -3.223 0.886 F33 A1BL7 35 A1BL7 O36 O3 O 0 1 N N N N N N 17.599 41.623 20.087 3.058 5.284 0.081 O36 A1BL7 36 A1BL7 O37 O4 O 0 1 N N N N N N 17.321 43.778 19.806 1.638 4.145 -1.171 O37 A1BL7 37 A1BL7 H1 H1 H 0 1 N N N N N N 15.977 41.226 23.723 -1.185 4.098 1.057 H1 A1BL7 38 A1BL7 H2 H2 H 0 1 N N N N N N 13.318 36.158 24.082 -1.443 -1.502 0.197 H2 A1BL7 39 A1BL7 H3 H3 H 0 1 N N N N N N 14.325 37.563 24.570 -2.699 -0.899 1.305 H3 A1BL7 40 A1BL7 H4 H4 H 0 1 N N N N N N 11.242 38.996 22.312 -4.720 -0.197 -2.067 H4 A1BL7 41 A1BL7 H5 H5 H 0 1 N N N N N N 10.260 37.579 21.809 -5.884 0.290 -0.809 H5 A1BL7 42 A1BL7 H6 H6 H 0 1 N N N N N N 12.284 36.144 21.842 -3.826 1.758 -0.896 H6 A1BL7 43 A1BL7 H7 H7 H 0 1 N N N N N N 12.532 37.551 20.754 -4.062 0.965 0.680 H7 A1BL7 44 A1BL7 H8 H8 H 0 1 N N N N N N 9.929 38.308 26.566 -8.150 -2.791 1.425 H8 A1BL7 45 A1BL7 H9 H9 H 0 1 N N N N N N 9.545 37.435 28.864 -10.347 -1.637 1.245 H9 A1BL7 46 A1BL7 H10 H10 H 0 1 N N N N N N 9.029 33.613 27.320 -8.673 1.123 -1.371 H10 A1BL7 47 A1BL7 H11 H11 H 0 1 N N N N N N 16.400 42.984 22.417 1.094 4.406 1.826 H11 A1BL7 48 A1BL7 H12 H12 H 0 1 N N N N N N 15.174 43.377 21.164 2.303 3.115 1.630 H12 A1BL7 49 A1BL7 H13 H13 H 0 1 N N N N N N 12.295 39.025 24.543 -3.143 -2.353 -1.344 H13 A1BL7 50 A1BL7 H14 H14 H 0 1 N N N N N N 12.063 37.634 25.655 -3.493 -2.976 0.290 H14 A1BL7 51 A1BL7 H15 H15 H 0 1 N N N N N N 13.917 39.126 18.732 1.731 -0.840 -0.553 H15 A1BL7 52 A1BL7 H16 H16 H 0 1 N N N N N N 14.546 42.149 16.688 3.190 -2.749 0.306 H16 A1BL7 53 A1BL7 H17 H17 H 0 1 N N N N N N 13.721 42.359 14.386 5.510 -3.566 0.388 H17 A1BL7 54 A1BL7 H18 H18 H 0 1 N N N N N N 11.587 38.687 14.792 6.930 0.347 -0.547 H18 A1BL7 55 A1BL7 H19 H19 H 0 1 N N N N N N 12.417 38.458 17.088 4.614 1.172 -0.636 H19 A1BL7 56 A1BL7 H20 H20 H 0 1 N N N N N N 18.223 41.824 19.399 3.387 5.714 -0.720 H20 A1BL7 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BL7 F33 C30 SING N N 1 A1BL7 F32 C30 SING N N 2 A1BL7 C30 F31 SING N N 3 A1BL7 C30 C27 SING N N 4 A1BL7 C27 C26 DOUB Y N 5 A1BL7 C27 C28 SING Y N 6 A1BL7 C26 C25 SING Y N 7 A1BL7 C28 C29 DOUB Y N 8 A1BL7 C25 C24 DOUB Y N 9 A1BL7 C29 C24 SING Y N 10 A1BL7 C24 N23 SING N N 11 A1BL7 N23 C21 SING N N 12 A1BL7 O22 C21 DOUB N N 13 A1BL7 C21 C4 SING N N 14 A1BL7 O37 C35 DOUB N N 15 A1BL7 O36 C35 SING N N 16 A1BL7 C35 C34 SING N N 17 A1BL7 C4 N5 DOUB Y N 18 A1BL7 C4 C3 SING Y N 19 A1BL7 N5 C6 SING Y N 20 A1BL7 C34 C3 SING N N 21 A1BL7 C3 C2 DOUB Y N 22 A1BL7 C12 C11 SING N N 23 A1BL7 C12 N7 SING N N 24 A1BL7 C6 N7 SING N N 25 A1BL7 C6 N1 DOUB Y N 26 A1BL7 C11 N10 SING N N 27 A1BL7 N7 C8 SING N N 28 A1BL7 C2 N1 SING Y N 29 A1BL7 O14 C13 DOUB N N 30 A1BL7 N10 C13 SING N N 31 A1BL7 N10 C9 SING N N 32 A1BL7 C8 C9 SING N N 33 A1BL7 C13 C15 SING N N 34 A1BL7 C15 N20 DOUB Y N 35 A1BL7 C15 C16 SING Y N 36 A1BL7 N20 C19 SING Y N 37 A1BL7 C16 C17 DOUB Y N 38 A1BL7 C19 N18 DOUB Y N 39 A1BL7 C17 N18 SING Y N 40 A1BL7 C2 H1 SING N N 41 A1BL7 C8 H2 SING N N 42 A1BL7 C8 H3 SING N N 43 A1BL7 C11 H4 SING N N 44 A1BL7 C11 H5 SING N N 45 A1BL7 C12 H6 SING N N 46 A1BL7 C12 H7 SING N N 47 A1BL7 C16 H8 SING N N 48 A1BL7 C17 H9 SING N N 49 A1BL7 C19 H10 SING N N 50 A1BL7 C34 H11 SING N N 51 A1BL7 C34 H12 SING N N 52 A1BL7 C9 H13 SING N N 53 A1BL7 C9 H14 SING N N 54 A1BL7 N23 H15 SING N N 55 A1BL7 C25 H16 SING N N 56 A1BL7 C26 H17 SING N N 57 A1BL7 C28 H18 SING N N 58 A1BL7 C29 H19 SING N N 59 A1BL7 O36 H20 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BL7 SMILES ACDLabs 14.52 "O=C(c1ccncn1)N1CCN(CC1)c1nc(C(=O)Nc2ccc(cc2)C(F)(F)F)c(CC(=O)O)cn1" A1BL7 InChI InChI 1.06 "InChI=1S/C23H20F3N7O4/c24-23(25,26)15-1-3-16(4-2-15)30-20(36)19-14(11-18(34)35)12-28-22(31-19)33-9-7-32(8-10-33)21(37)17-5-6-27-13-29-17/h1-6,12-13H,7-11H2,(H,30,36)(H,34,35)" A1BL7 InChIKey InChI 1.06 JBOZOIPBSRMMEE-UHFFFAOYSA-N A1BL7 SMILES_CANONICAL CACTVS 3.385 "OC(=O)Cc1cnc(nc1C(=O)Nc2ccc(cc2)C(F)(F)F)N3CCN(CC3)C(=O)c4ccncn4" A1BL7 SMILES CACTVS 3.385 "OC(=O)Cc1cnc(nc1C(=O)Nc2ccc(cc2)C(F)(F)F)N3CCN(CC3)C(=O)c4ccncn4" A1BL7 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(ccc1C(F)(F)F)NC(=O)c2c(cnc(n2)N3CCN(CC3)C(=O)c4ccncn4)CC(=O)O" A1BL7 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(ccc1C(F)(F)F)NC(=O)c2c(cnc(n2)N3CCN(CC3)C(=O)c4ccncn4)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BL7 "SYSTEMATIC NAME" ACDLabs 14.52 "(2-[4-(pyrimidine-4-carbonyl)piperazin-1-yl]-4-{[4-(trifluoromethyl)phenyl]carbamoyl}pyrimidin-5-yl)acetic acid" A1BL7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-[2-(4-pyrimidin-4-ylcarbonylpiperazin-1-yl)-4-[[4-(trifluoromethyl)phenyl]carbamoyl]pyrimidin-5-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BL7 "Create component" 2024-12-17 RCSB A1BL7 "Initial release" 2026-01-14 RCSB #