data_A1BLV # _chem_comp.id A1BLV _chem_comp.name "(1R)-1-({(6M)-2-(methylamino)-6-[3-(pyrrolidin-1-yl)phenyl]pyrimidin-4-yl}amino)-2,3-dihydro-1H-indene-4-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H26 N6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-17 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BLV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9MK7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BLV C5 C1 C 0 1 Y N N N N N -18.932 -25.880 -25.436 -1.182 1.624 -0.491 C5 A1BLV 1 A1BLV C7 C2 C 0 1 N N R N N N -19.875 -27.339 -23.623 -2.969 0.206 -1.437 C7 A1BLV 2 A1BLV C8 C3 C 0 1 N N N N N N -20.005 -28.872 -23.709 -4.214 0.417 -2.324 C8 A1BLV 3 A1BLV C10 C4 C 0 1 Y N N N N N -21.247 -28.065 -21.833 -4.812 -0.678 -0.241 C10 A1BLV 4 A1BLV C13 C5 C 0 1 Y N N N N N -22.298 -25.554 -21.216 -3.345 -2.203 1.557 C13 A1BLV 5 A1BLV C15 C6 C 0 1 Y N N N N N -22.136 -27.917 -20.756 -5.465 -1.438 0.734 C15 A1BLV 6 A1BLV C20 C7 C 0 1 Y N N N N N -18.171 -23.179 -27.976 1.988 -0.384 -0.208 C20 A1BLV 7 A1BLV C21 C8 C 0 1 Y N N N N N -17.090 -22.319 -28.198 3.297 -0.192 0.226 C21 A1BLV 8 A1BLV C22 C9 C 0 1 Y N N N N N -17.146 -21.331 -29.191 4.205 -1.238 0.161 C22 A1BLV 9 A1BLV C24 C10 C 0 1 N N N N N N -14.783 -20.551 -28.671 6.446 -1.986 -0.092 C24 A1BLV 10 A1BLV C26 C11 C 0 1 N N N N N N -14.386 -19.371 -30.739 7.504 0.192 -0.060 C26 A1BLV 11 A1BLV C28 C12 C 0 1 Y N N N N N -18.311 -21.205 -29.961 3.808 -2.473 -0.338 C28 A1BLV 12 A1BLV C1 C13 C 0 1 N N N N N N -15.271 -26.210 -23.660 -0.012 5.266 0.959 C1 A1BLV 13 A1BLV N2 N1 N 0 1 N N N N N N -15.589 -25.232 -24.671 0.929 4.145 0.886 N2 A1BLV 14 A1BLV C3 C14 C 0 1 Y N N N N N -16.795 -25.117 -25.240 0.511 2.921 0.392 C3 A1BLV 15 A1BLV N4 N2 N 0 1 Y N N N N N -17.757 -25.937 -24.792 -0.744 2.783 -0.010 N4 A1BLV 16 A1BLV N6 N3 N 0 1 N N N N N N -19.950 -26.619 -24.886 -2.496 1.489 -0.909 N6 A1BLV 17 A1BLV C9 C15 C 0 1 N N N N N N -20.612 -29.323 -22.365 -5.371 0.223 -1.321 C9 A1BLV 18 A1BLV C11 C16 C 0 1 Y N N N N N -20.892 -26.947 -22.578 -3.434 -0.688 -0.307 C11 A1BLV 19 A1BLV C12 C17 C 0 1 Y N N N N N -21.420 -25.696 -22.274 -2.703 -1.450 0.591 C12 A1BLV 20 A1BLV C14 C18 C 0 1 Y N N N N N -22.659 -26.658 -20.459 -4.722 -2.202 1.634 C14 A1BLV 21 A1BLV C16 C19 C 0 1 N N N N N N -22.392 -29.029 -19.877 -6.895 -1.432 0.808 C16 A1BLV 22 A1BLV N17 N4 N 0 1 N N N N N N -22.576 -29.939 -19.206 -8.030 -1.427 0.867 N17 A1BLV 23 A1BLV C18 C20 C 0 1 Y N N N N N -19.142 -25.028 -26.530 -0.300 0.547 -0.573 C18 A1BLV 24 A1BLV C19 C21 C 0 1 Y N N N N N -18.072 -24.211 -26.906 1.011 0.730 -0.141 C19 A1BLV 25 A1BLV N23 N5 N 0 1 N N N N N N -16.015 -20.527 -29.466 5.520 -1.050 0.595 N23 A1BLV 26 A1BLV C25 C22 C 0 1 N N N N N N -13.701 -20.285 -29.698 7.831 -1.313 0.083 C25 A1BLV 27 A1BLV C27 C23 C 0 1 N N N N N N -15.899 -19.649 -30.634 5.999 0.309 0.261 C27 A1BLV 28 A1BLV C29 C24 C 0 1 Y N N N N N -19.380 -22.056 -29.742 2.509 -2.662 -0.768 C29 A1BLV 29 A1BLV C30 C25 C 0 1 Y N N N N N -19.315 -23.033 -28.760 1.599 -1.625 -0.711 C30 A1BLV 30 A1BLV N31 N6 N 0 1 Y N N N N N -16.895 -24.255 -26.265 1.375 1.921 0.334 N31 A1BLV 31 A1BLV H1 H1 H 0 1 N N N N N N -18.884 -27.137 -23.190 -2.178 -0.282 -2.006 H1 A1BLV 32 A1BLV H2 H2 H 0 1 N N N N N N -20.667 -29.153 -24.541 -4.227 1.423 -2.742 H2 A1BLV 33 A1BLV H3 H3 H 0 1 N N N N N N -19.017 -29.332 -23.855 -4.258 -0.333 -3.115 H3 A1BLV 34 A1BLV H4 H4 H 0 1 N N N N N N -22.703 -24.582 -20.979 -2.766 -2.793 2.253 H4 A1BLV 35 A1BLV H5 H5 H 0 1 N N N N N N -16.199 -22.418 -27.595 3.604 0.769 0.613 H5 A1BLV 36 A1BLV H6 H6 H 0 1 N N N N N N -14.641 -21.532 -28.194 6.431 -2.964 0.388 H6 A1BLV 37 A1BLV H7 H7 H 0 1 N N N N N N -14.796 -19.767 -27.900 6.192 -2.073 -1.148 H7 A1BLV 38 A1BLV H8 H8 H 0 1 N N N N N N -14.025 -19.609 -31.750 8.089 0.775 0.652 H8 A1BLV 39 A1BLV H9 H9 H 0 1 N N N N N N -14.177 -18.315 -30.514 7.702 0.527 -1.078 H9 A1BLV 40 A1BLV H10 H10 H 0 1 N N N N N N -18.374 -20.444 -30.725 4.515 -3.288 -0.384 H10 A1BLV 41 A1BLV H11 H11 H 0 1 N N N N N N -14.219 -26.097 -23.358 0.494 6.139 1.371 H11 A1BLV 42 A1BLV H12 H12 H 0 1 N N N N N N -15.922 -26.059 -22.786 -0.380 5.497 -0.040 H12 A1BLV 43 A1BLV H13 H13 H 0 1 N N N N N N -15.429 -27.220 -24.065 -0.850 4.995 1.601 H13 A1BLV 44 A1BLV H14 H14 H 0 1 N N N N N N -14.949 -25.398 -25.421 1.845 4.260 1.184 H14 A1BLV 45 A1BLV H15 H15 H 0 1 N N N N N N -20.715 -25.983 -24.785 -3.103 2.243 -0.852 H15 A1BLV 46 A1BLV H16 H16 H 0 1 N N N N N N -21.365 -30.111 -22.517 -5.668 1.182 -0.897 H16 A1BLV 47 A1BLV H17 H17 H 0 1 N N N N N N -19.831 -29.689 -21.683 -6.220 -0.254 -1.810 H17 A1BLV 48 A1BLV H18 H18 H 0 1 N N N N N N -21.144 -24.835 -22.865 -1.625 -1.455 0.537 H18 A1BLV 49 A1BLV H19 H19 H 0 1 N N N N N N -23.348 -26.543 -19.636 -5.223 -2.790 2.389 H19 A1BLV 50 A1BLV H20 H20 H 0 1 N N N N N N -20.085 -25.004 -27.056 -0.626 -0.407 -0.963 H20 A1BLV 51 A1BLV H21 H21 H 0 1 N N N N N N -13.365 -21.223 -30.163 8.240 -1.527 1.070 H21 A1BLV 52 A1BLV H22 H22 H 0 1 N N N N N N -12.842 -19.776 -29.237 8.519 -1.634 -0.699 H22 A1BLV 53 A1BLV H23 H23 H 0 1 N N N N N N -16.459 -18.715 -30.479 5.851 0.975 1.112 H23 A1BLV 54 A1BLV H24 H24 H 0 1 N N N N N N -16.268 -20.152 -31.540 5.463 0.689 -0.608 H24 A1BLV 55 A1BLV H25 H25 H 0 1 N N N N N N -20.273 -21.958 -30.341 2.204 -3.624 -1.155 H25 A1BLV 56 A1BLV H26 H26 H 0 1 N N N N N N -20.159 -23.688 -28.601 0.585 -1.777 -1.049 H26 A1BLV 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BLV C26 C27 SING N N 1 A1BLV C26 C25 SING N N 2 A1BLV C27 N23 SING N N 3 A1BLV C28 C29 DOUB Y N 4 A1BLV C28 C22 SING Y N 5 A1BLV C29 C30 SING Y N 6 A1BLV C25 C24 SING N N 7 A1BLV N23 C22 SING N N 8 A1BLV N23 C24 SING N N 9 A1BLV C22 C21 DOUB Y N 10 A1BLV C30 C20 DOUB Y N 11 A1BLV C21 C20 SING Y N 12 A1BLV C20 C19 SING N N 13 A1BLV C19 C18 DOUB Y N 14 A1BLV C19 N31 SING Y N 15 A1BLV C18 C5 SING Y N 16 A1BLV N31 C3 DOUB Y N 17 A1BLV C5 N6 SING N N 18 A1BLV C5 N4 DOUB Y N 19 A1BLV C3 N4 SING Y N 20 A1BLV C3 N2 SING N N 21 A1BLV N6 C7 SING N N 22 A1BLV N2 C1 SING N N 23 A1BLV C8 C7 SING N N 24 A1BLV C8 C9 SING N N 25 A1BLV C7 C11 SING N N 26 A1BLV C11 C12 DOUB Y N 27 A1BLV C11 C10 SING Y N 28 A1BLV C9 C10 SING N N 29 A1BLV C12 C13 SING Y N 30 A1BLV C10 C15 DOUB Y N 31 A1BLV C13 C14 DOUB Y N 32 A1BLV C15 C14 SING Y N 33 A1BLV C15 C16 SING N N 34 A1BLV C16 N17 TRIP N N 35 A1BLV C7 H1 SING N N 36 A1BLV C8 H2 SING N N 37 A1BLV C8 H3 SING N N 38 A1BLV C13 H4 SING N N 39 A1BLV C21 H5 SING N N 40 A1BLV C24 H6 SING N N 41 A1BLV C24 H7 SING N N 42 A1BLV C26 H8 SING N N 43 A1BLV C26 H9 SING N N 44 A1BLV C28 H10 SING N N 45 A1BLV C1 H11 SING N N 46 A1BLV C1 H12 SING N N 47 A1BLV C1 H13 SING N N 48 A1BLV N2 H14 SING N N 49 A1BLV N6 H15 SING N N 50 A1BLV C9 H16 SING N N 51 A1BLV C9 H17 SING N N 52 A1BLV C12 H18 SING N N 53 A1BLV C14 H19 SING N N 54 A1BLV C18 H20 SING N N 55 A1BLV C25 H21 SING N N 56 A1BLV C25 H22 SING N N 57 A1BLV C27 H23 SING N N 58 A1BLV C27 H24 SING N N 59 A1BLV C29 H25 SING N N 60 A1BLV C30 H26 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BLV SMILES ACDLabs 14.52 "N#Cc1cccc2c1CCC2Nc1cc(nc(NC)n1)c1cccc(c1)N1CCCC1" A1BLV InChI InChI 1.06 "InChI=1S/C25H26N6/c1-27-25-29-23(17-6-4-8-19(14-17)31-12-2-3-13-31)15-24(30-25)28-22-11-10-20-18(16-26)7-5-9-21(20)22/h4-9,14-15,22H,2-3,10-13H2,1H3,(H2,27,28,29,30)/t22-/m1/s1" A1BLV InChIKey InChI 1.06 AAOXHEZQAFYPKY-JOCHJYFZSA-N A1BLV SMILES_CANONICAL CACTVS 3.385 "CNc1nc(N[C@@H]2CCc3c(cccc23)C#N)cc(n1)c4cccc(c4)N5CCCC5" A1BLV SMILES CACTVS 3.385 "CNc1nc(N[CH]2CCc3c(cccc23)C#N)cc(n1)c4cccc(c4)N5CCCC5" A1BLV SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CNc1nc(cc(n1)N[C@@H]2CCc3c2cccc3C#N)c4cccc(c4)N5CCCC5" A1BLV SMILES "OpenEye OEToolkits" 3.1.0.0 "CNc1nc(cc(n1)NC2CCc3c2cccc3C#N)c4cccc(c4)N5CCCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BLV "SYSTEMATIC NAME" ACDLabs 14.52 "(1R)-1-({(6M)-2-(methylamino)-6-[3-(pyrrolidin-1-yl)phenyl]pyrimidin-4-yl}amino)-2,3-dihydro-1H-indene-4-carbonitrile" A1BLV "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{R})-1-[[2-(methylamino)-6-(3-pyrrolidin-1-ylphenyl)pyrimidin-4-yl]amino]-2,3-dihydro-1~{H}-indene-4-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BLV "Create component" 2024-12-17 RCSB A1BLV "Initial release" 2025-02-26 RCSB #