data_A1BMF # _chem_comp.id A1BMF _chem_comp.name "(2E,6E)-3,7,11-trimethyldodeca-2,6,10-triene-1-thiol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H26 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-20 _chem_comp.pdbx_modified_date 2025-07-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 238.432 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BMF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9MLO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BMF C10 C1 C 0 1 N N N N N N -56.100 -21.918 1.469 3.426 0.621 -0.408 C10 A1BMF 1 A1BMF C02 C2 C 0 1 N N N N N N -59.632 -16.570 6.325 -5.048 -0.610 -0.879 C02 A1BMF 2 A1BMF C03 C3 C 0 1 N N N N N N -58.938 -17.907 6.111 -3.548 -0.507 -0.777 C03 A1BMF 3 A1BMF C04 C4 C 0 1 N N N N N N -58.059 -17.963 5.109 -2.911 -1.148 0.171 C04 A1BMF 4 A1BMF C05 C5 C 0 1 N N N N N N -57.291 -19.225 4.837 -1.404 -1.155 0.193 C05 A1BMF 5 A1BMF C06 C6 C 0 1 N N N N N N -58.269 -20.361 4.940 -0.902 -0.040 1.113 C06 A1BMF 6 A1BMF C07 C7 C 0 1 N N N N N N -57.872 -20.847 3.571 0.604 -0.047 1.136 C07 A1BMF 7 A1BMF C08 C8 C 0 1 N N N N N N -57.633 -22.136 3.473 1.270 1.014 0.752 C08 A1BMF 8 A1BMF C09 C9 C 0 1 N N N N N N -57.236 -22.731 2.099 2.769 1.058 0.903 C09 A1BMF 9 A1BMF C11 C10 C 0 1 N N N N N N -55.379 -22.139 2.769 4.925 0.665 -0.257 C11 A1BMF 10 A1BMF C12 C11 C 0 1 N N N N N N -54.513 -21.280 3.121 5.641 -0.402 -0.514 C12 A1BMF 11 A1BMF C13 C12 C 0 1 N N N N N N -54.222 -20.188 2.084 7.140 -0.357 -0.363 C13 A1BMF 12 A1BMF C14 C13 C 0 1 N N N N N N -53.903 -21.585 4.539 4.965 -1.673 -0.959 C14 A1BMF 13 A1BMF C15 C14 C 0 1 N N N N N N -57.882 -22.988 4.724 0.537 2.190 0.161 C15 A1BMF 14 A1BMF C16 C15 C 0 1 N N N N N N -57.732 -16.793 4.201 -3.684 -1.879 1.238 C16 A1BMF 15 A1BMF S01 S1 S 0 1 N N N N N N -60.646 -16.901 7.802 -5.787 1.024 -0.607 S01 A1BMF 16 A1BMF H1 H1 H 0 1 N N N N N N -55.628 -22.380 0.590 3.115 -0.395 -0.649 H1 A1BMF 17 A1BMF H2 H2 H 0 1 N N N N N N -56.346 -20.870 1.245 3.122 1.294 -1.209 H2 A1BMF 18 A1BMF H3 H3 H 0 1 N N N N N N -58.904 -15.767 6.512 -5.321 -0.971 -1.871 H3 A1BMF 19 A1BMF H4 H4 H 0 1 N N N N N N -60.259 -16.303 5.462 -5.417 -1.306 -0.125 H4 A1BMF 20 A1BMF H5 H5 H 0 1 N N N N N N -59.145 -18.763 6.736 -2.999 0.095 -1.485 H5 A1BMF 21 A1BMF H6 H6 H 0 1 N N N N N N -56.489 -19.348 5.580 -1.051 -2.118 0.563 H6 A1BMF 22 A1BMF H7 H7 H 0 1 N N N N N N -56.854 -19.192 3.828 -1.025 -0.992 -0.815 H7 A1BMF 23 A1BMF H8 H8 H 0 1 N N N N N N -59.319 -20.041 5.014 -1.256 0.922 0.743 H8 A1BMF 24 A1BMF H9 H9 H 0 1 N N N N N N -58.045 -21.072 5.749 -1.282 -0.203 2.122 H9 A1BMF 25 A1BMF H10 H10 H 0 1 N N N N N N -57.789 -20.180 2.725 1.135 -0.927 1.468 H10 A1BMF 26 A1BMF H11 H11 H 0 1 N N N N N N -58.109 -22.711 1.430 3.074 0.385 1.704 H11 A1BMF 27 A1BMF H12 H12 H 0 1 N N N N N N -56.904 -23.770 2.237 3.080 2.074 1.144 H12 A1BMF 28 A1BMF H13 H13 H 0 1 N N N N N N -55.591 -23.001 3.384 5.409 1.576 0.062 H13 A1BMF 29 A1BMF H14 H14 H 0 1 N N N N N N -53.463 -19.497 2.481 7.411 -0.643 0.653 H14 A1BMF 30 A1BMF H15 H15 H 0 1 N N N N N N -53.848 -20.651 1.159 7.596 -1.051 -1.069 H15 A1BMF 31 A1BMF H16 H16 H 0 1 N N N N N N -55.146 -19.632 1.868 7.495 0.653 -0.564 H16 A1BMF 32 A1BMF H17 H17 H 0 1 N N N N N N -54.393 -22.472 4.967 4.423 -1.490 -1.887 H17 A1BMF 33 A1BMF H18 H18 H 0 1 N N N N N N -52.824 -21.774 4.441 5.717 -2.445 -1.124 H18 A1BMF 34 A1BMF H19 H19 H 0 1 N N N N N N -54.065 -20.722 5.201 4.268 -2.003 -0.189 H19 A1BMF 35 A1BMF H20 H20 H 0 1 N N N N N N -58.149 -22.334 5.567 0.185 2.839 0.963 H20 A1BMF 36 A1BMF H21 H21 H 0 1 N N N N N N -58.706 -23.691 4.531 1.211 2.749 -0.489 H21 A1BMF 37 A1BMF H22 H22 H 0 1 N N N N N N -56.970 -23.551 4.972 -0.314 1.834 -0.419 H22 A1BMF 38 A1BMF H23 H23 H 0 1 N N N N N N -58.346 -15.926 4.484 -3.939 -2.877 0.883 H23 A1BMF 39 A1BMF H24 H24 H 0 1 N N N N N N -56.667 -16.537 4.302 -3.074 -1.958 2.138 H24 A1BMF 40 A1BMF H25 H25 H 0 1 N N N N N N -57.945 -17.068 3.158 -4.597 -1.329 1.465 H25 A1BMF 41 A1BMF H26 H26 H 0 1 N N N N N N -61.239 -15.758 7.984 -7.105 0.784 -0.725 H26 A1BMF 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BMF C10 C09 SING N N 1 A1BMF C10 C11 SING N N 2 A1BMF C13 C12 SING N N 3 A1BMF C09 C08 SING N N 4 A1BMF C11 C12 DOUB N N 5 A1BMF C12 C14 SING N N 6 A1BMF C08 C07 DOUB N E 7 A1BMF C08 C15 SING N N 8 A1BMF C07 C06 SING N N 9 A1BMF C16 C04 SING N N 10 A1BMF C05 C06 SING N N 11 A1BMF C05 C04 SING N N 12 A1BMF C04 C03 DOUB N E 13 A1BMF C03 C02 SING N N 14 A1BMF C02 S01 SING N N 15 A1BMF C10 H1 SING N N 16 A1BMF C10 H2 SING N N 17 A1BMF C02 H3 SING N N 18 A1BMF C02 H4 SING N N 19 A1BMF C03 H5 SING N N 20 A1BMF C05 H6 SING N N 21 A1BMF C05 H7 SING N N 22 A1BMF C06 H8 SING N N 23 A1BMF C06 H9 SING N N 24 A1BMF C07 H10 SING N N 25 A1BMF C09 H11 SING N N 26 A1BMF C09 H12 SING N N 27 A1BMF C11 H13 SING N N 28 A1BMF C13 H14 SING N N 29 A1BMF C13 H15 SING N N 30 A1BMF C13 H16 SING N N 31 A1BMF C14 H17 SING N N 32 A1BMF C14 H18 SING N N 33 A1BMF C14 H19 SING N N 34 A1BMF C15 H20 SING N N 35 A1BMF C15 H21 SING N N 36 A1BMF C15 H22 SING N N 37 A1BMF C16 H23 SING N N 38 A1BMF C16 H24 SING N N 39 A1BMF C16 H25 SING N N 40 A1BMF S01 H26 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BMF SMILES ACDLabs 14.52 "C/C(C)=C\CCC(\C)=C\CCC(\C)=C\CS" A1BMF InChI InChI 1.06 "InChI=1S/C15H26S/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-16/h7,9,11,16H,5-6,8,10,12H2,1-4H3/b14-9+,15-11+" A1BMF InChIKey InChI 1.06 CJWPDADGDASKGI-YFVJMOTDSA-N A1BMF SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCC\C(C)=C\CC\C(C)=C\CS" A1BMF SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCS" A1BMF SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(=CCC/C(=C/CC/C(=C/CS)/C)/C)C" A1BMF SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(=CCCC(=CCCC(=CCS)C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BMF "SYSTEMATIC NAME" ACDLabs 14.52 "(2E,6E)-3,7,11-trimethyldodeca-2,6,10-triene-1-thiol" A1BMF "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-triene-1-thiol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BMF "Create component" 2024-12-20 RCSB A1BMF "Modify coordinates" 2025-01-22 RCSB A1BMF "Initial release" 2025-07-16 RCSB #