data_A1BMZ # _chem_comp.id A1BMZ _chem_comp.name "N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-octanamidoethyl)-beta-alaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H38 N3 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-24 _chem_comp.pdbx_modified_date 2025-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 467.494 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BMZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9MLW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BMZ C1 C1 C 0 1 N N N N N N -12.288 -30.101 -18.926 15.522 -1.023 -0.524 C1 A1BMZ 1 A1BMZ C2 C2 C 0 1 N N N N N N -11.930 -29.982 -17.482 14.199 -1.380 0.157 C2 A1BMZ 2 A1BMZ C3 C3 C 0 1 N N N N N N -13.225 -29.937 -16.698 13.059 -0.604 -0.505 C3 A1BMZ 3 A1BMZ C4 C4 C 0 1 N N N N N N -13.487 -31.280 -16.049 11.736 -0.961 0.175 C4 A1BMZ 4 A1BMZ C5 C5 C 0 1 N N N N N N -12.519 -31.607 -14.923 10.596 -0.184 -0.487 C5 A1BMZ 5 A1BMZ C6 C6 C 0 1 N N N N N N -13.226 -32.142 -13.677 9.273 -0.542 0.194 C6 A1BMZ 6 A1BMZ C7 C7 C 0 1 N N N N N N -13.912 -31.056 -12.885 8.133 0.235 -0.468 C7 A1BMZ 7 A1BMZ C8 C8 C 0 1 N N N N N N -12.902 -30.130 -12.259 6.830 -0.117 0.203 C8 A1BMZ 8 A1BMZ O1 O1 O 0 1 N N N N N N -12.277 -29.297 -12.919 6.815 -0.910 1.120 O1 A1BMZ 9 A1BMZ N1 N1 N 0 1 N N N N N N -12.751 -30.207 -10.940 5.682 0.451 -0.217 N1 A1BMZ 10 A1BMZ C9 C9 C 0 1 N N N N N N -13.751 -30.738 -10.036 4.415 0.109 0.435 C9 A1BMZ 11 A1BMZ C10 C10 C 0 1 N N N N N N -13.337 -30.204 -8.707 3.275 0.885 -0.227 C10 A1BMZ 12 A1BMZ N2 N2 N 0 1 N N N N N N -12.646 -31.237 -7.950 2.009 0.543 0.424 N2 A1BMZ 13 A1BMZ C11 C11 C 0 1 N N N N N N -13.329 -32.136 -7.229 0.860 1.111 0.005 C11 A1BMZ 14 A1BMZ O2 O2 O 0 1 N N N N N N -14.581 -32.110 -7.094 0.876 1.904 -0.912 O2 A1BMZ 15 A1BMZ C12 C12 C 0 1 N N N N N N -12.496 -33.273 -6.689 -0.443 0.759 0.675 C12 A1BMZ 16 A1BMZ C13 C13 C 0 1 N N N N N N -12.269 -34.220 -7.838 -1.583 1.535 0.013 C13 A1BMZ 17 A1BMZ N3 N3 N 0 1 N N N N N N -11.117 -35.097 -7.679 -2.850 1.194 0.665 N3 A1BMZ 18 A1BMZ C14 C14 C 0 1 N N N N N N -10.887 -35.851 -6.613 -3.998 1.761 0.246 C14 A1BMZ 19 A1BMZ O3 O3 O 0 1 N N N N N N -11.069 -35.496 -5.459 -3.972 2.622 -0.607 O3 A1BMZ 20 A1BMZ C15 C15 C 0 1 N N R N N N -10.627 -37.314 -6.933 -5.314 1.324 0.837 C15 A1BMZ 21 A1BMZ O4 O4 O 0 1 N N N N N N -11.217 -38.095 -5.909 -5.073 0.517 1.991 O4 A1BMZ 22 A1BMZ C16 C16 C 0 1 N N N N N N -9.101 -37.518 -7.188 -6.094 0.513 -0.199 C16 A1BMZ 23 A1BMZ C17 C17 C 0 1 N N N N N N -8.393 -36.554 -6.214 -6.481 1.419 -1.370 C17 A1BMZ 24 A1BMZ C18 C18 C 0 1 N N N N N N -8.808 -37.231 -8.668 -5.222 -0.636 -0.709 C18 A1BMZ 25 A1BMZ C19 C19 C 0 1 N N N N N N -8.494 -38.886 -6.906 -7.360 -0.055 0.446 C19 A1BMZ 26 A1BMZ O5 O5 O 0 1 N N N N N N -8.579 -38.806 -5.502 -8.089 -0.812 -0.522 O5 A1BMZ 27 A1BMZ P1 P1 P 0 1 N N N N N N -7.485 -39.506 -4.519 -9.478 -1.556 -0.189 P1 A1BMZ 28 A1BMZ O6 O6 O 0 1 N N N N N N -7.978 -39.102 -3.113 -9.947 -2.415 -1.467 O6 A1BMZ 29 A1BMZ O7 O7 O 0 1 N N N N N N -7.712 -41.032 -4.952 -9.289 -2.457 0.970 O7 A1BMZ 30 A1BMZ H37 H37 H 0 1 N Y N N N N -14.564 -30.478 -13.556 8.316 1.305 -0.368 H37 A1BMZ 31 A1BMZ O9 O9 O 0 1 N Y N N N N -5.874 -39.316 -4.578 -10.603 -0.459 0.163 O9 A1BMZ 32 A1BMZ H1 H1 H 0 1 N N N N N N -11.370 -30.137 -19.530 16.334 -1.577 -0.052 H1 A1BMZ 33 A1BMZ H2 H2 H 0 1 N N N N N N -12.868 -31.022 -19.085 15.469 -1.286 -1.581 H2 A1BMZ 34 A1BMZ H3 H3 H 0 1 N N N N N N -12.891 -29.232 -19.227 15.705 0.047 -0.424 H3 A1BMZ 35 A1BMZ H4 H4 H 0 1 N N N N N N -11.331 -30.850 -17.170 14.016 -2.450 0.057 H4 A1BMZ 36 A1BMZ H5 H5 H 0 1 N N N N N N -11.355 -29.060 -17.312 14.252 -1.118 1.213 H5 A1BMZ 37 A1BMZ H6 H6 H 0 1 N N N N N N -13.152 -29.164 -15.919 13.242 0.466 -0.405 H6 A1BMZ 38 A1BMZ H7 H7 H 0 1 N N N N N N -14.054 -29.694 -17.379 13.007 -0.866 -1.562 H7 A1BMZ 39 A1BMZ H8 H8 H 0 1 N N N N N N -14.508 -31.276 -15.640 11.553 -2.031 0.075 H8 A1BMZ 40 A1BMZ H9 H9 H 0 1 N N N N N N -13.403 -32.061 -16.819 11.789 -0.699 1.232 H9 A1BMZ 41 A1BMZ H10 H10 H 0 1 N N N N N N -11.808 -32.368 -15.279 10.779 0.885 -0.387 H10 A1BMZ 42 A1BMZ H11 H11 H 0 1 N N N N N N -11.972 -30.692 -14.652 10.544 -0.447 -1.543 H11 A1BMZ 43 A1BMZ H12 H12 H 0 1 N N N N N N -13.980 -32.879 -13.990 9.090 -1.611 0.094 H12 A1BMZ 44 A1BMZ H13 H13 H 0 1 N N N N N N -12.481 -32.631 -13.032 9.326 -0.279 1.251 H13 A1BMZ 45 A1BMZ H38 H38 H 0 1 N Y N N N N -14.519 -31.517 -12.092 8.081 -0.027 -1.525 H38 A1BMZ 46 A1BMZ H15 H15 H 0 1 N N N N N N -11.893 -29.877 -10.547 5.694 1.085 -0.951 H15 A1BMZ 47 A1BMZ H16 H16 H 0 1 N N N N N N -14.756 -30.381 -10.308 4.232 -0.961 0.335 H16 A1BMZ 48 A1BMZ H17 H17 H 0 1 N N N N N N -13.739 -31.838 -10.039 4.468 0.371 1.491 H17 A1BMZ 49 A1BMZ H18 H18 H 0 1 N N N N N N -12.663 -29.347 -8.852 3.458 1.955 -0.127 H18 A1BMZ 50 A1BMZ H19 H19 H 0 1 N N N N N N -14.229 -29.879 -8.151 3.223 0.623 -1.284 H19 A1BMZ 51 A1BMZ H20 H20 H 0 1 N N N N N N -11.647 -31.276 -7.968 1.996 -0.091 1.158 H20 A1BMZ 52 A1BMZ H21 H21 H 0 1 N N N N N N -13.032 -33.784 -5.876 -0.626 -0.311 0.576 H21 A1BMZ 53 A1BMZ H22 H22 H 0 1 N N N N N N -11.534 -32.894 -6.313 -0.390 1.021 1.732 H22 A1BMZ 54 A1BMZ H23 H23 H 0 1 N N N N N N -12.124 -33.624 -8.751 -1.400 2.605 0.113 H23 A1BMZ 55 A1BMZ H24 H24 H 0 1 N N N N N N -13.166 -34.847 -7.949 -1.636 1.273 -1.043 H24 A1BMZ 56 A1BMZ H25 H25 H 0 1 N N N N N N -10.453 -35.133 -8.426 -2.862 0.559 1.399 H25 A1BMZ 57 A1BMZ H26 H26 H 0 1 N N N N N N -11.139 -37.536 -7.881 -5.893 2.203 1.122 H26 A1BMZ 58 A1BMZ H27 H27 H 0 1 N N N N N N -11.477 -37.531 -5.190 -4.562 -0.283 1.811 H27 A1BMZ 59 A1BMZ H28 H28 H 0 1 N N N N N N -8.651 -36.823 -5.179 -5.579 1.761 -1.878 H28 A1BMZ 60 A1BMZ H29 H29 H 0 1 N N N N N N -7.304 -36.628 -6.351 -7.103 0.861 -2.071 H29 A1BMZ 61 A1BMZ H30 H30 H 0 1 N N N N N N -8.719 -35.523 -6.417 -7.036 2.279 -0.997 H30 A1BMZ 62 A1BMZ H31 H31 H 0 1 N N N N N N -7.735 -37.371 -8.864 -4.947 -1.281 0.125 H31 A1BMZ 63 A1BMZ H32 H32 H 0 1 N N N N N N -9.388 -37.922 -9.297 -5.778 -1.214 -1.447 H32 A1BMZ 64 A1BMZ H33 H33 H 0 1 N N N N N N -9.092 -36.195 -8.904 -4.320 -0.231 -1.169 H33 A1BMZ 65 A1BMZ H34 H34 H 0 1 N N N N N N -9.094 -39.709 -7.321 -7.085 -0.700 1.280 H34 A1BMZ 66 A1BMZ H35 H35 H 0 1 N N N N N N -7.457 -38.971 -7.264 -7.981 0.764 0.809 H35 A1BMZ 67 A1BMZ H36 H36 H 0 1 N N N N N N -8.365 -39.856 -2.684 -10.779 -2.891 -1.337 H36 A1BMZ 68 A1BMZ H39 H39 H 0 1 N Y N N N N -5.468 -40.132 -4.847 -10.779 0.167 -0.553 H39 A1BMZ 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BMZ C1 C2 SING N N 1 A1BMZ C2 C3 SING N N 2 A1BMZ C3 C4 SING N N 3 A1BMZ C4 C5 SING N N 4 A1BMZ C5 C6 SING N N 5 A1BMZ C6 C7 SING N N 6 A1BMZ O1 C8 DOUB N N 7 A1BMZ C7 C8 SING N N 8 A1BMZ C8 N1 SING N N 9 A1BMZ N1 C9 SING N N 10 A1BMZ C9 C10 SING N N 11 A1BMZ C10 N2 SING N N 12 A1BMZ C18 C16 SING N N 13 A1BMZ N2 C11 SING N N 14 A1BMZ C13 N3 SING N N 15 A1BMZ C13 C12 SING N N 16 A1BMZ N3 C14 SING N N 17 A1BMZ C11 O2 DOUB N N 18 A1BMZ C11 C12 SING N N 19 A1BMZ C16 C15 SING N N 20 A1BMZ C16 C19 SING N N 21 A1BMZ C16 C17 SING N N 22 A1BMZ C15 C14 SING N N 23 A1BMZ C15 O4 SING N N 24 A1BMZ C19 O5 SING N N 25 A1BMZ C14 O3 DOUB N N 26 A1BMZ O5 P1 SING N N 27 A1BMZ O7 P1 DOUB N N 28 A1BMZ P1 O6 SING N N 29 A1BMZ C7 H37 SING N N 30 A1BMZ P1 O9 SING N N 31 A1BMZ C1 H1 SING N N 32 A1BMZ C1 H2 SING N N 33 A1BMZ C1 H3 SING N N 34 A1BMZ C2 H4 SING N N 35 A1BMZ C2 H5 SING N N 36 A1BMZ C3 H6 SING N N 37 A1BMZ C3 H7 SING N N 38 A1BMZ C4 H8 SING N N 39 A1BMZ C4 H9 SING N N 40 A1BMZ C5 H10 SING N N 41 A1BMZ C5 H11 SING N N 42 A1BMZ C6 H12 SING N N 43 A1BMZ C6 H13 SING N N 44 A1BMZ C7 H38 SING N N 45 A1BMZ N1 H15 SING N N 46 A1BMZ C9 H16 SING N N 47 A1BMZ C9 H17 SING N N 48 A1BMZ C10 H18 SING N N 49 A1BMZ C10 H19 SING N N 50 A1BMZ N2 H20 SING N N 51 A1BMZ C12 H21 SING N N 52 A1BMZ C12 H22 SING N N 53 A1BMZ C13 H23 SING N N 54 A1BMZ C13 H24 SING N N 55 A1BMZ N3 H25 SING N N 56 A1BMZ C15 H26 SING N N 57 A1BMZ O4 H27 SING N N 58 A1BMZ C17 H28 SING N N 59 A1BMZ C17 H29 SING N N 60 A1BMZ C17 H30 SING N N 61 A1BMZ C18 H31 SING N N 62 A1BMZ C18 H32 SING N N 63 A1BMZ C18 H33 SING N N 64 A1BMZ C19 H34 SING N N 65 A1BMZ C19 H35 SING N N 66 A1BMZ O6 H36 SING N N 67 A1BMZ O9 H39 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BMZ SMILES ACDLabs 14.52 "O=P(O)(O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCNC(=O)CCCCCCC" A1BMZ InChI InChI 1.06 "InChI=1S/C19H38N3O8P/c1-4-5-6-7-8-9-15(23)20-12-13-21-16(24)10-11-22-18(26)17(25)19(2,3)14-30-31(27,28)29/h17,25H,4-14H2,1-3H3,(H,20,23)(H,21,24)(H,22,26)(H2,27,28,29)/t17-/m0/s1" A1BMZ InChIKey InChI 1.06 ZIGJSYVYXLXQHO-KRWDZBQOSA-N A1BMZ SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC(=O)NCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O" A1BMZ SMILES CACTVS 3.385 "CCCCCCCC(=O)NCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O" A1BMZ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCCCCCCC(=O)NCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O" A1BMZ SMILES "OpenEye OEToolkits" 3.1.0.0 "CCCCCCCC(=O)NCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BMZ "SYSTEMATIC NAME" ACDLabs 14.52 "N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-octanamidoethyl)-beta-alaninamide" A1BMZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(3~{R})-2,2-dimethyl-4-[[3-[2-(octanoylamino)ethylamino]-3-oxidanylidene-propyl]amino]-3-oxidanyl-4-oxidanylidene-butyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 A1BMZ SER None Crosslinker "Amino-acid side chain" "Any position" P1 OG ? ? 2 A1BMZ CYS None Crosslinker "Amino-acid side chain" "Any position" C7 SG ? ? 3 A1BMZ CYS None Crosslinker "Amino-acid side chain" "Any position" C6 SG ? ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BMZ "Create component" 2024-12-24 RCSB A1BMZ "Modify PCM" 2024-12-27 RCSB A1BMZ "Other modification" 2025-02-05 RCSB A1BMZ "Other modification" 2025-02-24 RCSB A1BMZ "Initial release" 2025-09-24 RCSB #