data_A1BNE # _chem_comp.id A1BNE _chem_comp.name "1-[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]-N-methylmethanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-02 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 179.216 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BNE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HTT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BNE C4 C1 C 0 1 Y N N N N N -34.234 -33.598 12.972 1.525 0.714 0.062 C4 A1BNE 1 A1BNE C5 C2 C 0 1 Y N N N N N -34.853 -32.385 12.732 2.908 0.772 0.149 C5 A1BNE 2 A1BNE C6 C3 C 0 1 Y N N N N N -35.008 -31.479 13.765 3.655 -0.390 0.091 C6 A1BNE 3 A1BNE C7 C4 C 0 1 Y N N N N N -34.509 -31.760 15.020 3.026 -1.612 -0.053 C7 A1BNE 4 A1BNE C8 C5 C 0 1 Y N N N N N -33.844 -32.948 15.254 1.648 -1.677 -0.141 C8 A1BNE 5 A1BNE N N1 N 0 1 N N N N N N -30.133 -35.257 13.795 -3.301 -0.709 0.417 N A1BNE 6 A1BNE C C6 C 0 1 N N N N N N -29.548 -36.605 13.695 -4.695 -0.842 -0.027 C A1BNE 7 A1BNE O O1 O 0 1 N N N N N N -34.057 -34.462 11.913 0.802 1.865 0.128 O A1BNE 8 A1BNE C1 C7 C 0 1 N N N N N N -31.272 -35.071 12.894 -2.652 0.442 -0.225 C1 A1BNE 9 A1BNE C2 C8 C 0 1 N N R N N N -32.534 -35.778 13.368 -1.205 0.548 0.262 C2 A1BNE 10 A1BNE C3 C9 C 0 1 N N N N N N -33.596 -35.780 12.283 -0.552 1.802 -0.334 C3 A1BNE 11 A1BNE C9 C10 C 0 1 Y N N N N N -33.673 -33.853 14.217 0.893 -0.516 -0.084 C9 A1BNE 12 A1BNE O1 O2 O 0 1 N N N N N N -33.023 -35.037 14.501 -0.463 -0.595 -0.176 O1 A1BNE 13 A1BNE H1 H1 H 0 1 N N N N N N -35.214 -32.146 11.742 3.401 1.726 0.261 H1 A1BNE 14 A1BNE H2 H2 H 0 1 N N N N N N -35.523 -30.546 13.588 4.732 -0.342 0.158 H2 A1BNE 15 A1BNE H3 H3 H 0 1 N N N N N N -34.639 -31.049 15.822 3.612 -2.518 -0.097 H3 A1BNE 16 A1BNE H4 H4 H 0 1 N N N N N N -33.460 -33.171 16.238 1.159 -2.634 -0.254 H4 A1BNE 17 A1BNE H5 H5 H 0 1 N N N N N N -29.429 -34.584 13.565 -2.784 -1.558 0.246 H5 A1BNE 18 A1BNE H7 H7 H 0 1 N N N N N N -28.700 -36.690 14.390 -5.247 0.061 0.233 H7 A1BNE 19 A1BNE H8 H8 H 0 1 N N N N N N -30.310 -37.355 13.953 -4.720 -0.985 -1.108 H8 A1BNE 20 A1BNE H9 H9 H 0 1 N N N N N N -29.198 -36.777 12.667 -5.152 -1.702 0.463 H9 A1BNE 21 A1BNE H10 H10 H 0 1 N N N N N N -31.002 -35.465 11.903 -2.662 0.308 -1.306 H10 A1BNE 22 A1BNE H11 H11 H 0 1 N N N N N N -31.483 -33.994 12.815 -3.190 1.354 0.034 H11 A1BNE 23 A1BNE H12 H12 H 0 1 N N N N N N -32.293 -36.813 13.652 -1.187 0.604 1.351 H12 A1BNE 24 A1BNE H13 H13 H 0 1 N N N N N N -34.458 -36.360 12.643 -1.093 2.690 -0.008 H13 A1BNE 25 A1BNE H14 H14 H 0 1 N N N N N N -33.177 -36.264 11.389 -0.566 1.742 -1.423 H14 A1BNE 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BNE O C3 SING N N 1 A1BNE O C4 SING N N 2 A1BNE C3 C2 SING N N 3 A1BNE C5 C4 DOUB Y N 4 A1BNE C5 C6 SING Y N 5 A1BNE C1 C2 SING N N 6 A1BNE C1 N SING N N 7 A1BNE C4 C9 SING Y N 8 A1BNE C2 O1 SING N N 9 A1BNE C N SING N N 10 A1BNE C6 C7 DOUB Y N 11 A1BNE C9 O1 SING N N 12 A1BNE C9 C8 DOUB Y N 13 A1BNE C7 C8 SING Y N 14 A1BNE C5 H1 SING N N 15 A1BNE C6 H2 SING N N 16 A1BNE C7 H3 SING N N 17 A1BNE C8 H4 SING N N 18 A1BNE N H5 SING N N 19 A1BNE C H7 SING N N 20 A1BNE C H8 SING N N 21 A1BNE C H9 SING N N 22 A1BNE C1 H10 SING N N 23 A1BNE C1 H11 SING N N 24 A1BNE C2 H12 SING N N 25 A1BNE C3 H13 SING N N 26 A1BNE C3 H14 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BNE SMILES ACDLabs 14.52 CNCC1COc2ccccc2O1 A1BNE InChI InChI 1.06 "InChI=1S/C10H13NO2/c1-11-6-8-7-12-9-4-2-3-5-10(9)13-8/h2-5,8,11H,6-7H2,1H3/t8-/m1/s1" A1BNE InChIKey InChI 1.06 RPZMFKMYOVWSQN-MRVPVSSYSA-N A1BNE SMILES_CANONICAL CACTVS 3.385 "CNC[C@@H]1COc2ccccc2O1" A1BNE SMILES CACTVS 3.385 "CNC[CH]1COc2ccccc2O1" A1BNE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CNC[C@@H]1COc2ccccc2O1" A1BNE SMILES "OpenEye OEToolkits" 3.1.0.0 CNCC1COc2ccccc2O1 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BNE "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]-N-methylmethanamine" A1BNE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]-~{N}-methyl-methanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BNE "Create component" 2025-01-02 RCSB A1BNE "Initial release" 2025-08-13 RCSB #