data_A1BO2 # _chem_comp.id A1BO2 _chem_comp.name "(3S)-1-[(2-cyanothiophen-3-yl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 277.342 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BO2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HV9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BO2 N1 N1 N 0 1 N N N N N N 9.961 14.185 22.399 1.142 -0.696 0.559 N1 A1BO2 1 A1BO2 C4 C1 C 0 1 Y N N N N N 9.591 11.058 23.901 -2.579 -0.554 0.388 C4 A1BO2 2 A1BO2 C5 C2 C 0 1 N N N N N N 9.467 12.542 24.130 -1.250 -1.256 0.275 C5 A1BO2 3 A1BO2 C6 C3 C 0 1 N N N N N N 9.157 13.172 22.789 -0.141 -0.287 0.596 C6 A1BO2 4 A1BO2 C7 C4 C 0 1 N N N N N N 10.996 14.834 23.221 1.477 -2.083 0.208 C7 A1BO2 5 A1BO2 C8 C5 C 0 1 N N N N N N 12.348 14.826 22.518 2.484 -2.071 -0.947 C8 A1BO2 6 A1BO2 C10 C6 C 0 1 N N S N N N 11.150 14.540 20.299 3.233 0.225 -0.299 C10 A1BO2 7 A1BO2 O1 O1 O 0 1 N N N N N N 10.651 16.206 18.638 5.533 0.582 0.092 O1 A1BO2 8 A1BO2 C11 C7 C 0 1 N N N N N N 10.999 15.043 18.873 4.426 1.076 0.053 C11 A1BO2 9 A1BO2 N2 N2 N 0 1 N N N N N N 11.226 14.153 17.926 4.262 2.386 0.324 N2 A1BO2 10 A1BO2 C9 C8 C 0 1 N N N N N N 12.231 15.314 21.068 3.690 -1.213 -0.557 C9 A1BO2 11 A1BO2 C12 C9 C 0 1 N N N N N N 9.834 14.734 21.046 2.235 0.239 0.863 C12 A1BO2 12 A1BO2 O O2 O 0 1 N N N N N N 8.227 12.776 22.101 -0.404 0.860 0.887 O A1BO2 13 A1BO2 C1 C10 C 0 1 Y N N N N N 8.853 10.125 24.531 -3.133 0.172 -0.628 C1 A1BO2 14 A1BO2 C C11 C 0 1 N N N N N N 7.893 10.354 25.567 -2.551 0.372 -1.921 C A1BO2 15 A1BO2 N N3 N 0 1 N N N N N N 7.133 10.583 26.393 -2.088 0.530 -2.946 N A1BO2 16 A1BO2 C3 C12 C 0 1 Y N N N N N 10.478 10.459 22.959 -3.358 -0.586 1.522 C3 A1BO2 17 A1BO2 C2 C13 C 0 1 Y N N N N N 10.361 9.119 22.915 -4.506 0.094 1.440 C2 A1BO2 18 A1BO2 S S1 S 0 1 Y N N N N N 9.191 8.554 23.993 -4.677 0.822 -0.094 S A1BO2 19 A1BO2 H4 H1 H 0 1 N N N N N N 8.654 12.748 24.841 -1.219 -2.089 0.978 H4 A1BO2 20 A1BO2 H3 H2 H 0 1 N N N N N N 10.411 12.943 24.527 -1.122 -1.632 -0.740 H3 A1BO2 21 A1BO2 H6 H3 H 0 1 N N N N N N 10.699 15.875 23.414 1.917 -2.582 1.071 H6 A1BO2 22 A1BO2 H5 H4 H 0 1 N N N N N N 11.085 14.295 24.176 0.574 -2.610 -0.100 H5 A1BO2 23 A1BO2 H7 H5 H 0 1 N N N N N N 13.038 15.487 23.063 2.813 -3.089 -1.153 H7 A1BO2 24 A1BO2 H8 H6 H 0 1 N N N N N N 12.745 13.800 22.519 2.012 -1.653 -1.836 H8 A1BO2 25 A1BO2 H H7 H 0 1 N N N N N N 11.409 13.471 20.286 2.755 0.621 -1.195 H A1BO2 26 A1BO2 H12 H8 H 0 1 N N N N N N 11.118 14.407 16.965 3.377 2.781 0.292 H12 A1BO2 27 A1BO2 H11 H9 H 0 1 N N N N N N 11.506 13.224 18.169 5.030 2.934 0.550 H11 A1BO2 28 A1BO2 H9 H10 H 0 1 N N N N N N 11.972 16.383 21.070 4.146 -1.617 0.347 H9 A1BO2 29 A1BO2 H10 H11 H 0 1 N N N N N N 13.199 15.173 20.564 4.419 -1.222 -1.367 H10 A1BO2 30 A1BO2 H13 H12 H 0 1 N N N N N N 9.600 15.807 21.105 1.832 1.244 0.987 H13 A1BO2 31 A1BO2 H14 H13 H 0 1 N N N N N N 9.027 14.211 20.511 2.736 -0.071 1.780 H14 A1BO2 32 A1BO2 H2 H14 H 0 1 N N N N N N 11.169 11.020 22.347 -3.063 -1.121 2.412 H2 A1BO2 33 A1BO2 H1 H15 H 0 1 N N N N N N 10.945 8.482 22.268 -5.230 0.171 2.238 H1 A1BO2 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BO2 N C TRIP N N 1 A1BO2 C C1 SING N N 2 A1BO2 C1 S SING Y N 3 A1BO2 S C2 SING Y N 4 A1BO2 C2 C3 DOUB Y N 5 A1BO2 C3 C4 SING Y N 6 A1BO2 C1 C4 DOUB Y N 7 A1BO2 C4 C5 SING N N 8 A1BO2 C5 C6 SING N N 9 A1BO2 O C6 DOUB N N 10 A1BO2 C6 N1 SING N N 11 A1BO2 N1 C7 SING N N 12 A1BO2 C7 C8 SING N N 13 A1BO2 C8 C9 SING N N 14 A1BO2 C9 C10 SING N N 15 A1BO2 C10 C11 SING N N 16 A1BO2 N2 C11 SING N N 17 A1BO2 C11 O1 DOUB N N 18 A1BO2 C12 C10 SING N N 19 A1BO2 N1 C12 SING N N 20 A1BO2 C5 H4 SING N N 21 A1BO2 C5 H3 SING N N 22 A1BO2 C7 H6 SING N N 23 A1BO2 C7 H5 SING N N 24 A1BO2 C8 H7 SING N N 25 A1BO2 C8 H8 SING N N 26 A1BO2 C10 H SING N N 27 A1BO2 N2 H12 SING N N 28 A1BO2 N2 H11 SING N N 29 A1BO2 C9 H9 SING N N 30 A1BO2 C9 H10 SING N N 31 A1BO2 C12 H13 SING N N 32 A1BO2 C12 H14 SING N N 33 A1BO2 C3 H2 SING N N 34 A1BO2 C2 H1 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BO2 SMILES ACDLabs 14.52 "O=C(Cc1ccsc1C#N)N1CCCC(C1)C(N)=O" A1BO2 InChI InChI 1.06 "InChI=1S/C13H15N3O2S/c14-7-11-9(3-5-19-11)6-12(17)16-4-1-2-10(8-16)13(15)18/h3,5,10H,1-2,4,6,8H2,(H2,15,18)/t10-/m0/s1" A1BO2 InChIKey InChI 1.06 AQMCQXPYDBYMNV-JTQLQIEISA-N A1BO2 SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)Cc2ccsc2C#N" A1BO2 SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)Cc2ccsc2C#N" A1BO2 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1csc(c1CC(=O)N2CCC[C@@H](C2)C(=O)N)C#N" A1BO2 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1csc(c1CC(=O)N2CCCC(C2)C(=O)N)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BO2 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(2-cyanothiophen-3-yl)acetyl]piperidine-3-carboxamide" A1BO2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(2-cyanothiophen-3-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BO2 "Create component" 2025-01-10 RCSB A1BO2 "Initial release" 2025-02-26 RCSB #