data_A1BO5 # _chem_comp.id A1BO5 _chem_comp.name "3-[3-(3-methylphenyl)-2-oxo-1,3-diazinan-1-yl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 261.320 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BO5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HYO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BO5 N1 N1 N 0 1 N N N N N N 8.967 16.274 21.290 1.368 0.894 0.496 N1 A1BO5 1 A1BO5 C4 C1 C 0 1 Y N N N N N 7.105 13.289 24.391 -2.381 -0.317 -1.545 C4 A1BO5 2 A1BO5 C5 C2 C 0 1 Y N N N N N 8.056 13.471 23.391 -2.089 0.162 -0.275 C5 A1BO5 3 A1BO5 C6 C3 C 0 1 N N N N N N 9.182 15.544 24.009 -0.953 2.355 -0.191 C6 A1BO5 4 A1BO5 C7 C4 C 0 1 N N N N N N 9.364 16.996 23.601 0.431 2.851 -0.623 C7 A1BO5 5 A1BO5 C8 C5 C 0 1 N N N N N N 9.779 17.136 22.152 1.466 2.350 0.389 C8 A1BO5 6 A1BO5 C10 C6 C 0 1 N N N N N N 10.268 16.309 19.211 3.303 -0.271 -0.442 C10 A1BO5 7 A1BO5 C13 C7 C 0 1 Y N N N N N 8.654 12.368 22.785 -2.960 -0.092 0.776 C13 A1BO5 8 A1BO5 O1 O1 O 0 1 N N N N N N 7.499 14.615 20.937 0.179 -0.955 0.392 O1 A1BO5 9 A1BO5 C12 C8 C 0 1 N N N N N N 8.297 15.150 21.671 0.209 0.255 0.280 C12 A1BO5 10 A1BO5 C9 C9 C 0 1 N N N N N N 8.957 16.650 19.873 2.562 0.117 0.839 C9 A1BO5 11 A1BO5 C11 C10 C 0 1 N N N N N N 10.258 16.535 17.723 4.532 -1.070 -0.090 C11 A1BO5 12 A1BO5 O O2 O 0 1 N N N N N N 9.860 17.606 17.250 4.789 -1.305 1.072 O A1BO5 13 A1BO5 N2 N2 N 0 1 N N N N N N 10.667 15.514 16.988 5.344 -1.523 -1.065 N2 A1BO5 14 A1BO5 N N3 N 0 1 N N N N N N 8.444 14.777 22.986 -0.920 0.899 -0.054 N A1BO5 15 A1BO5 C3 C11 C 0 1 Y N N N N N 6.767 12.002 24.770 -3.538 -1.038 -1.761 C3 A1BO5 16 A1BO5 C2 C12 C 0 1 Y N N N N N 7.341 10.912 24.130 -4.406 -1.285 -0.713 C2 A1BO5 17 A1BO5 C1 C13 C 0 1 Y N N N N N 8.291 11.078 23.138 -4.114 -0.820 0.555 C1 A1BO5 18 A1BO5 C C14 C 0 1 N N N N N N 8.979 9.888 22.514 -5.062 -1.091 1.694 C A1BO5 19 A1BO5 H5 H1 H 0 1 N N N N N N 6.638 14.140 24.864 -1.705 -0.121 -2.365 H5 A1BO5 20 A1BO5 H6 H2 H 0 1 N N N N N N 8.622 15.507 24.955 -1.220 2.806 0.765 H6 A1BO5 21 A1BO5 H7 H3 H 0 1 N N N N N N 10.172 15.087 24.151 -1.691 2.634 -0.943 H7 A1BO5 22 A1BO5 H9 H4 H 0 1 N N N N N N 8.412 17.528 23.750 0.667 2.460 -1.613 H9 A1BO5 23 A1BO5 H8 H5 H 0 1 N N N N N N 10.140 17.448 24.237 0.438 3.941 -0.646 H8 A1BO5 24 A1BO5 H10 H6 H 0 1 N N N N N N 9.649 18.183 21.840 1.271 2.801 1.362 H10 A1BO5 25 A1BO5 H11 H7 H 0 1 N N N N N N 10.837 16.852 22.051 2.466 2.625 0.054 H11 A1BO5 26 A1BO5 H14 H8 H 0 1 N N N N N N 11.057 16.935 19.654 2.648 -0.872 -1.073 H14 A1BO5 27 A1BO5 H15 H9 H 0 1 N N N N N N 10.491 15.249 19.402 3.598 0.631 -0.979 H15 A1BO5 28 A1BO5 H18 H10 H 0 1 N N N N N N 9.411 12.520 22.030 -2.737 0.279 1.766 H18 A1BO5 29 A1BO5 H13 H11 H 0 1 N N N N N N 8.146 16.109 19.364 3.217 0.718 1.469 H13 A1BO5 30 A1BO5 H12 H12 H 0 1 N N N N N N 8.784 17.733 19.790 2.268 -0.784 1.375 H12 A1BO5 31 A1BO5 H17 H13 H 0 1 N N N N N N 10.665 15.584 15.990 5.138 -1.334 -1.994 H17 A1BO5 32 A1BO5 H16 H14 H 0 1 N N N N N N 10.978 14.673 17.430 6.135 -2.037 -0.838 H16 A1BO5 33 A1BO5 H4 H15 H 0 1 N N N N N N 6.054 11.845 25.566 -3.765 -1.411 -2.749 H4 A1BO5 34 A1BO5 H3 H16 H 0 1 N N N N N N 7.040 9.914 24.412 -5.311 -1.849 -0.885 H3 A1BO5 35 A1BO5 H1 H17 H 0 1 N N N N N N 8.422 9.568 21.621 -4.794 -2.031 2.175 H1 A1BO5 36 A1BO5 H2 H18 H 0 1 N N N N N N 10.004 10.166 22.226 -4.999 -0.280 2.421 H2 A1BO5 37 A1BO5 H H19 H 0 1 N N N N N N 9.014 9.062 23.240 -6.081 -1.157 1.311 H A1BO5 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BO5 C C1 SING N N 1 A1BO5 C1 C2 DOUB Y N 2 A1BO5 C2 C3 SING Y N 3 A1BO5 C3 C4 DOUB Y N 4 A1BO5 C4 C5 SING Y N 5 A1BO5 C5 N SING N N 6 A1BO5 N C6 SING N N 7 A1BO5 C6 C7 SING N N 8 A1BO5 C7 C8 SING N N 9 A1BO5 C8 N1 SING N N 10 A1BO5 C9 N1 SING N N 11 A1BO5 C10 C9 SING N N 12 A1BO5 C11 C10 SING N N 13 A1BO5 N2 C11 SING N N 14 A1BO5 O C11 DOUB N N 15 A1BO5 N1 C12 SING N N 16 A1BO5 N C12 SING N N 17 A1BO5 C12 O1 DOUB N N 18 A1BO5 C13 C5 DOUB Y N 19 A1BO5 C1 C13 SING Y N 20 A1BO5 C4 H5 SING N N 21 A1BO5 C6 H6 SING N N 22 A1BO5 C6 H7 SING N N 23 A1BO5 C7 H9 SING N N 24 A1BO5 C7 H8 SING N N 25 A1BO5 C8 H10 SING N N 26 A1BO5 C8 H11 SING N N 27 A1BO5 C10 H14 SING N N 28 A1BO5 C10 H15 SING N N 29 A1BO5 C13 H18 SING N N 30 A1BO5 C9 H13 SING N N 31 A1BO5 C9 H12 SING N N 32 A1BO5 N2 H17 SING N N 33 A1BO5 N2 H16 SING N N 34 A1BO5 C3 H4 SING N N 35 A1BO5 C2 H3 SING N N 36 A1BO5 C H1 SING N N 37 A1BO5 C H2 SING N N 38 A1BO5 C H SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BO5 SMILES ACDLabs 14.52 "Cc1cc(ccc1)N1CCCN(CCC(N)=O)C1=O" A1BO5 InChI InChI 1.06 "InChI=1S/C14H19N3O2/c1-11-4-2-5-12(10-11)17-8-3-7-16(14(17)19)9-6-13(15)18/h2,4-5,10H,3,6-9H2,1H3,(H2,15,18)" A1BO5 InChIKey InChI 1.06 SQAKFKXNPUIJIK-UHFFFAOYSA-N A1BO5 SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(c1)N2CCCN(CCC(N)=O)C2=O" A1BO5 SMILES CACTVS 3.385 "Cc1cccc(c1)N2CCCN(CCC(N)=O)C2=O" A1BO5 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc(c1)N2CCCN(C2=O)CCC(=O)N" A1BO5 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc(c1)N2CCCN(C2=O)CCC(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BO5 "SYSTEMATIC NAME" ACDLabs 14.52 "3-[3-(3-methylphenyl)-2-oxo-1,3-diazinan-1-yl]propanamide" A1BO5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-[3-(3-methylphenyl)-2-oxidanylidene-1,3-diazinan-1-yl]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BO5 "Create component" 2025-01-10 RCSB A1BO5 "Initial release" 2025-02-26 RCSB #