data_A1BOG # _chem_comp.id A1BOG _chem_comp.name "(3S)-1-[(3-chloropyridin-4-yl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H16 Cl N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 281.738 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BOG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HZ3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BOG N1 N1 N 0 1 N N N N N N 10.194 13.699 22.529 1.114 0.570 -0.118 N1 A1BOG 1 A1BOG C4 C1 C 0 1 N N N N N N 11.189 14.471 23.294 1.431 1.979 0.151 C4 A1BOG 2 A1BOG C5 C2 C 0 1 N N N N N N 9.484 12.653 23.010 -0.139 0.103 0.050 C5 A1BOG 3 A1BOG C6 C3 C 0 1 N N N N N N 9.918 12.127 24.368 -1.231 1.030 0.518 C6 A1BOG 4 A1BOG C7 C4 C 0 1 Y N N N N N 9.051 11.009 24.904 -2.526 0.267 0.624 C7 A1BOG 5 A1BOG C8 C5 C 0 1 Y N N N N N 8.135 11.249 25.923 -2.983 -0.190 1.850 C8 A1BOG 6 A1BOG C10 C6 C 0 1 Y N N N N N 8.465 8.684 25.110 -4.476 -0.694 -0.367 C10 A1BOG 7 A1BOG CL CL1 CL 0 0 N N N N N N 10.330 9.281 23.252 -2.775 0.563 -2.065 CL A1BOG 8 A1BOG C11 C7 C 0 1 Y N N N N N 9.202 9.687 24.504 -3.293 0.009 -0.504 C11 A1BOG 9 A1BOG N2 N2 N 0 1 Y N N N N N 7.584 8.921 26.089 -4.876 -1.118 0.816 N2 A1BOG 10 A1BOG C9 C8 C 0 1 Y N N N N N 7.437 10.193 26.476 -4.175 -0.887 1.909 C9 A1BOG 11 A1BOG O1 O1 O 0 1 N N N N N N 8.546 12.165 22.393 -0.388 -1.062 -0.176 O1 A1BOG 12 A1BOG C3 C9 C 0 1 N N N N N N 12.551 14.406 22.621 2.606 2.041 1.132 C3 A1BOG 13 A1BOG C2 C10 C 0 1 N N N N N N 12.458 14.823 21.148 3.777 1.230 0.572 C2 A1BOG 14 A1BOG C12 C11 C 0 1 N N N N N N 10.029 14.180 21.154 2.188 -0.320 -0.581 C12 A1BOG 15 A1BOG C1 C12 C 0 1 N N S N N N 11.354 14.064 20.390 3.356 -0.234 0.414 C1 A1BOG 16 A1BOG C C13 C 0 1 N N N N N N 11.232 14.550 18.954 4.519 -1.038 -0.108 C A1BOG 17 A1BOG O O2 O 0 1 N N N N N N 10.919 15.716 18.696 5.580 -0.495 -0.331 O A1BOG 18 A1BOG N N3 N 0 1 N N N N N N 11.476 13.654 18.017 4.380 -2.360 -0.325 N A1BOG 19 A1BOG H7 H1 H 0 1 N N N N N N 11.267 14.054 24.309 1.705 2.476 -0.779 H7 A1BOG 20 A1BOG H8 H2 H 0 1 N N N N N N 10.865 15.520 23.353 0.562 2.472 0.587 H8 A1BOG 21 A1BOG H10 H3 H 0 1 N N N N N N 10.949 11.753 24.280 -0.969 1.437 1.495 H10 A1BOG 22 A1BOG H9 H4 H 0 1 N N N N N N 9.890 12.960 25.086 -1.347 1.845 -0.196 H9 A1BOG 23 A1BOG H11 H5 H 0 1 N N N N N N 7.971 12.255 26.280 -2.414 -0.004 2.749 H11 A1BOG 24 A1BOG H13 H6 H 0 1 N N N N N N 8.607 7.666 24.778 -5.079 -0.899 -1.240 H13 A1BOG 25 A1BOG H12 H7 H 0 1 N N N N N N 6.732 10.407 27.266 -4.538 -1.246 2.861 H12 A1BOG 26 A1BOG H6 H8 H 0 1 N N N N N N 12.932 13.376 22.680 2.914 3.078 1.266 H6 A1BOG 27 A1BOG H5 H9 H 0 1 N N N N N N 13.243 15.083 23.143 2.301 1.625 2.092 H5 A1BOG 28 A1BOG H4 H10 H 0 1 N N N N N N 13.424 14.620 20.662 4.065 1.631 -0.400 H4 A1BOG 29 A1BOG H3 H11 H 0 1 N N N N N N 12.243 15.901 21.099 4.623 1.292 1.256 H3 A1BOG 30 A1BOG H15 H12 H 0 1 N N N N N N 9.263 13.575 20.647 1.820 -1.345 -0.625 H15 A1BOG 31 A1BOG H14 H13 H 0 1 N N N N N N 9.711 15.233 21.173 2.521 -0.008 -1.570 H14 A1BOG 32 A1BOG H H14 H 0 1 N N N N N N 11.635 13.001 20.365 3.044 -0.629 1.381 H A1BOG 33 A1BOG H1 H15 H 0 1 N N N N N N 11.410 13.909 17.052 3.532 -2.795 -0.147 H1 A1BOG 34 A1BOG H2 H16 H 0 1 N N N N N N 11.727 12.720 18.271 5.129 -2.878 -0.661 H2 A1BOG 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BOG N C SING N N 1 A1BOG O C DOUB N N 2 A1BOG C C1 SING N N 3 A1BOG C1 C2 SING N N 4 A1BOG C2 C3 SING N N 5 A1BOG C3 C4 SING N N 6 A1BOG C4 N1 SING N N 7 A1BOG N1 C5 SING N N 8 A1BOG O1 C5 DOUB N N 9 A1BOG C5 C6 SING N N 10 A1BOG C6 C7 SING N N 11 A1BOG C7 C8 DOUB Y N 12 A1BOG C8 C9 SING Y N 13 A1BOG C9 N2 DOUB Y N 14 A1BOG N2 C10 SING Y N 15 A1BOG C10 C11 DOUB Y N 16 A1BOG C7 C11 SING Y N 17 A1BOG C11 CL SING N N 18 A1BOG C12 N1 SING N N 19 A1BOG C1 C12 SING N N 20 A1BOG C4 H7 SING N N 21 A1BOG C4 H8 SING N N 22 A1BOG C6 H10 SING N N 23 A1BOG C6 H9 SING N N 24 A1BOG C8 H11 SING N N 25 A1BOG C10 H13 SING N N 26 A1BOG C9 H12 SING N N 27 A1BOG C3 H6 SING N N 28 A1BOG C3 H5 SING N N 29 A1BOG C2 H4 SING N N 30 A1BOG C2 H3 SING N N 31 A1BOG C12 H15 SING N N 32 A1BOG C12 H14 SING N N 33 A1BOG C1 H SING N N 34 A1BOG N H1 SING N N 35 A1BOG N H2 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BOG SMILES ACDLabs 14.52 "O=C(Cc1ccncc1Cl)N1CCCC(C1)C(N)=O" A1BOG InChI InChI 1.06 "InChI=1S/C13H16ClN3O2/c14-11-7-16-4-3-9(11)6-12(18)17-5-1-2-10(8-17)13(15)19/h3-4,7,10H,1-2,5-6,8H2,(H2,15,19)/t10-/m0/s1" A1BOG InChIKey InChI 1.06 KLQSXSCJLXMZBZ-JTQLQIEISA-N A1BOG SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)Cc2ccncc2Cl" A1BOG SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)Cc2ccncc2Cl" A1BOG SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cncc(c1CC(=O)N2CCC[C@@H](C2)C(=O)N)Cl" A1BOG SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cncc(c1CC(=O)N2CCCC(C2)C(=O)N)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BOG "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(3-chloropyridin-4-yl)acetyl]piperidine-3-carboxamide" A1BOG "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(3-chloranylpyridin-4-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BOG "Create component" 2025-01-10 RCSB A1BOG "Initial release" 2025-02-26 RCSB #