data_A1BOJ # _chem_comp.id A1BOJ _chem_comp.name "(3S)-1-[(2,4-dimethyl-1H-imidazol-5-yl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 264.324 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BOJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HUW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BOJ N1 N1 N 0 1 N N N N N N 10.829 13.946 22.384 1.022 -0.510 0.579 N1 A1BOJ 1 A1BOJ N3 N2 N 0 1 Y N N N N N 8.785 11.144 25.289 -3.582 -0.128 1.018 N3 A1BOJ 2 A1BOJ C4 C1 C 0 1 Y N N N N N 9.778 10.963 24.361 -2.669 -0.460 0.054 C4 A1BOJ 3 A1BOJ C5 C2 C 0 1 N N N N N N 10.684 12.087 23.952 -1.347 -1.152 0.269 C5 A1BOJ 4 A1BOJ C6 C3 C 0 1 N N N N N N 10.122 12.862 22.774 -0.253 -0.121 0.383 C6 A1BOJ 5 A1BOJ C7 C4 C 0 1 N N N N N N 11.928 14.577 23.138 1.362 -1.936 0.685 C7 A1BOJ 6 A1BOJ C8 C5 C 0 1 N N N N N N 13.219 14.605 22.320 2.463 -2.257 -0.331 C8 A1BOJ 7 A1BOJ C10 C6 C 0 1 N N S N N N 11.825 14.408 20.210 3.193 0.135 -0.329 C10 A1BOJ 8 A1BOJ O1 O1 O 0 1 N N N N N N 11.084 16.011 18.579 5.457 0.613 0.135 O1 A1BOJ 9 A1BOJ C11 C7 C 0 1 N N N N N N 11.582 14.900 18.794 4.365 1.063 -0.143 C11 A1BOJ 10 A1BOJ N2 N3 N 0 1 N N N N N N 11.860 14.039 17.826 4.201 2.393 -0.287 N2 A1BOJ 11 A1BOJ C9 C8 C 0 1 N N N N N N 12.977 15.155 20.909 3.646 -1.311 -0.110 C9 A1BOJ 12 A1BOJ C12 C9 C 0 1 N N N N N N 10.571 14.551 21.076 2.100 0.482 0.686 C12 A1BOJ 13 A1BOJ O O2 O 0 1 N N N N N N 9.109 12.506 22.193 -0.521 1.059 0.298 O A1BOJ 14 A1BOJ C2 C10 C 0 1 Y N N N N N 9.762 9.639 24.059 -3.178 -0.051 -1.123 C2 A1BOJ 15 A1BOJ C3 C11 C 0 1 N N N N N N 10.614 8.885 23.089 -2.524 -0.203 -2.472 C3 A1BOJ 16 A1BOJ N N4 N 0 1 Y N N N N N 8.792 8.989 24.797 -4.371 0.515 -0.885 N A1BOJ 17 A1BOJ C1 C12 C 0 1 Y N N N N N 8.214 9.941 25.518 -4.621 0.468 0.395 C1 A1BOJ 18 A1BOJ C C13 C 0 1 N N N N N N 7.019 9.760 26.396 -5.861 0.999 1.067 C A1BOJ 19 A1BOJ H1 H1 H 0 1 N N N N N N 8.529 12.010 25.719 -3.500 -0.293 1.970 H1 A1BOJ 20 A1BOJ H8 H2 H 0 1 N N N N N N 10.808 12.773 24.803 -1.389 -1.739 1.186 H8 A1BOJ 21 A1BOJ H9 H3 H 0 1 N N N N N N 11.663 11.671 23.671 -1.140 -1.810 -0.575 H9 A1BOJ 22 A1BOJ H10 H4 H 0 1 N N N N N N 11.642 15.608 23.392 1.718 -2.153 1.691 H10 A1BOJ 23 A1BOJ H11 H5 H 0 1 N N N N N N 12.102 14.007 24.062 0.479 -2.539 0.469 H11 A1BOJ 24 A1BOJ H12 H6 H 0 1 N N N N N N 13.953 15.244 22.832 2.792 -3.287 -0.198 H12 A1BOJ 25 A1BOJ H13 H7 H 0 1 N N N N N N 13.615 13.582 22.242 2.076 -2.125 -1.341 H13 A1BOJ 26 A1BOJ H H8 H 0 1 N N N N N N 12.090 13.341 20.164 2.799 0.244 -1.340 H A1BOJ 27 A1BOJ H17 H9 H 0 1 N N N N N N 11.667 14.277 16.874 3.329 2.753 -0.510 H17 A1BOJ 28 A1BOJ H16 H10 H 0 1 N N N N N N 12.263 13.151 18.047 4.956 2.990 -0.168 H16 A1BOJ 29 A1BOJ H14 H11 H 0 1 N N N N N N 12.722 16.223 20.979 4.017 -1.425 0.908 H14 A1BOJ 30 A1BOJ H15 H12 H 0 1 N N N N N N 13.895 15.035 20.315 4.441 -1.553 -0.815 H15 A1BOJ 31 A1BOJ H18 H13 H 0 1 N N N N N N 10.329 15.617 21.203 1.704 1.475 0.472 H18 A1BOJ 32 A1BOJ H19 H14 H 0 1 N N N N N N 9.727 14.038 20.592 2.516 0.462 1.693 H19 A1BOJ 33 A1BOJ H6 H15 H 0 1 N N N N N N 10.327 7.823 23.096 -2.824 -1.153 -2.916 H6 A1BOJ 34 A1BOJ H7 H16 H 0 1 N N N N N N 10.471 9.296 22.079 -2.835 0.616 -3.121 H7 A1BOJ 35 A1BOJ H5 H17 H 0 1 N N N N N N 11.671 8.981 23.378 -1.441 -0.183 -2.355 H5 A1BOJ 36 A1BOJ H2 H18 H 0 1 N N N N N N 6.688 8.712 26.354 -6.618 0.215 1.105 H2 A1BOJ 37 A1BOJ H3 H19 H 0 1 N N N N N N 7.282 10.021 27.432 -5.617 1.317 2.081 H3 A1BOJ 38 A1BOJ H4 H20 H 0 1 N N N N N N 6.206 10.415 26.049 -6.246 1.848 0.502 H4 A1BOJ 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BOJ C C1 SING N N 1 A1BOJ C1 N DOUB Y N 2 A1BOJ N C2 SING Y N 3 A1BOJ C3 C2 SING N N 4 A1BOJ C2 C4 DOUB Y N 5 A1BOJ C4 C5 SING N N 6 A1BOJ C5 C6 SING N N 7 A1BOJ O C6 DOUB N N 8 A1BOJ C6 N1 SING N N 9 A1BOJ N1 C7 SING N N 10 A1BOJ C7 C8 SING N N 11 A1BOJ C8 C9 SING N N 12 A1BOJ C9 C10 SING N N 13 A1BOJ C10 C11 SING N N 14 A1BOJ N2 C11 SING N N 15 A1BOJ C11 O1 DOUB N N 16 A1BOJ C12 C10 SING N N 17 A1BOJ N1 C12 SING N N 18 A1BOJ N3 C4 SING Y N 19 A1BOJ C1 N3 SING Y N 20 A1BOJ N3 H1 SING N N 21 A1BOJ C5 H8 SING N N 22 A1BOJ C5 H9 SING N N 23 A1BOJ C7 H10 SING N N 24 A1BOJ C7 H11 SING N N 25 A1BOJ C8 H12 SING N N 26 A1BOJ C8 H13 SING N N 27 A1BOJ C10 H SING N N 28 A1BOJ N2 H17 SING N N 29 A1BOJ N2 H16 SING N N 30 A1BOJ C9 H14 SING N N 31 A1BOJ C9 H15 SING N N 32 A1BOJ C12 H18 SING N N 33 A1BOJ C12 H19 SING N N 34 A1BOJ C3 H6 SING N N 35 A1BOJ C3 H7 SING N N 36 A1BOJ C3 H5 SING N N 37 A1BOJ C H2 SING N N 38 A1BOJ C H3 SING N N 39 A1BOJ C H4 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BOJ SMILES ACDLabs 14.52 "O=C(Cc1[NH]c(C)nc1C)N1CCCC(C1)C(N)=O" A1BOJ InChI InChI 1.06 "InChI=1S/C13H20N4O2/c1-8-11(16-9(2)15-8)6-12(18)17-5-3-4-10(7-17)13(14)19/h10H,3-7H2,1-2H3,(H2,14,19)(H,15,16)/t10-/m0/s1" A1BOJ InChIKey InChI 1.06 WUDFFWUBHSFYAN-JTQLQIEISA-N A1BOJ SMILES_CANONICAL CACTVS 3.385 "Cc1[nH]c(CC(=O)N2CCC[C@@H](C2)C(N)=O)c(C)n1" A1BOJ SMILES CACTVS 3.385 "Cc1[nH]c(CC(=O)N2CCC[CH](C2)C(N)=O)c(C)n1" A1BOJ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c(n1)C)CC(=O)N2CCC[C@@H](C2)C(=O)N" A1BOJ SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c(n1)C)CC(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BOJ "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(2,4-dimethyl-1H-imidazol-5-yl)acetyl]piperidine-3-carboxamide" A1BOJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(2,4-dimethyl-1~{H}-imidazol-5-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BOJ "Create component" 2025-01-10 RCSB A1BOJ "Initial release" 2025-02-26 RCSB #