data_A1BOO # _chem_comp.id A1BOO _chem_comp.name "(3S)-1-[(2R)-2-phenyl-2-(phenylsulfanyl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 354.466 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BOO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HWS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BOO N1 N1 N 0 1 N N N N N N 9.044 14.881 22.097 1.740 0.731 0.500 N1 A1BOO 1 A1BOO C4 C1 C 0 1 N N N N N N 9.989 15.669 22.909 1.572 -0.136 1.674 C4 A1BOO 2 A1BOO C5 C2 C 0 1 N N N N N N 8.263 13.880 22.559 0.677 1.092 -0.245 C5 A1BOO 3 A1BOO C6 C3 C 0 1 N N S N N N 8.458 13.471 24.022 -0.701 0.605 0.124 C6 A1BOO 4 A1BOO C7 C4 C 0 1 Y N N N N N 5.665 13.800 24.547 -3.461 1.058 0.010 C7 A1BOO 5 A1BOO C8 C5 C 0 1 Y N N N N N 4.671 13.068 25.181 -4.668 1.640 -0.357 C8 A1BOO 6 A1BOO C10 C6 C 0 1 Y N N N N N 3.008 14.119 23.810 -5.839 0.084 1.036 C10 A1BOO 7 A1BOO C13 C7 C 0 1 Y N N N N N 8.922 12.035 23.931 -0.884 -0.808 -0.368 C13 A1BOO 8 A1BOO C15 C8 C 0 1 Y N N N N N 8.563 9.688 24.289 -1.322 -3.118 0.080 C15 A1BOO 9 A1BOO C17 C9 C 0 1 Y N N N N N 10.416 10.400 22.985 -0.942 -2.385 -2.167 C17 A1BOO 10 A1BOO O1 O1 O 0 1 N N N N N N 7.526 13.250 21.825 0.828 1.808 -1.212 O1 A1BOO 11 A1BOO C3 C10 C 0 1 N N N N N N 11.414 15.535 22.390 2.516 -1.335 1.541 C3 A1BOO 12 A1BOO C2 C11 C 0 1 N N N N N N 11.487 15.847 20.891 3.946 -0.833 1.329 C2 A1BOO 13 A1BOO C19 C12 C 0 1 N N N N N N 9.025 15.260 20.684 3.089 1.202 0.156 C19 A1BOO 14 A1BOO C1 C13 C 0 1 N N S N N N 10.426 15.070 20.098 4.016 -0.017 0.037 C1 A1BOO 15 A1BOO C C14 C 0 1 N N N N N N 10.450 15.428 18.623 5.432 0.450 -0.187 C A1BOO 16 A1BOO O O2 O 0 1 N N N N N N 10.825 14.609 17.775 5.676 1.636 -0.251 O A1BOO 17 A1BOO N N2 N 0 1 N N N N N N 10.046 16.646 18.309 6.426 -0.451 -0.317 N A1BOO 18 A1BOO C18 C15 C 0 1 Y N N N N N 10.046 11.719 23.183 -0.775 -1.089 -1.717 C18 A1BOO 19 A1BOO C16 C16 C 0 1 Y N N N N N 9.676 9.390 23.536 -1.219 -3.399 -1.270 C16 A1BOO 20 A1BOO C14 C17 C 0 1 Y N N N N N 8.195 11.004 24.500 -1.154 -1.822 0.531 C14 A1BOO 21 A1BOO S S1 S 0 1 N N N N N N 7.241 13.831 25.365 -1.947 1.678 -0.643 S A1BOO 22 A1BOO C12 C18 C 0 1 Y N N N N N 5.323 14.672 23.524 -3.451 -0.012 0.897 C12 A1BOO 23 A1BOO C11 C19 C 0 1 Y N N N N N 3.992 14.834 23.168 -4.639 -0.495 1.408 C11 A1BOO 24 A1BOO C9 C20 C 0 1 Y N N N N N 3.345 13.239 24.814 -5.853 1.152 0.157 C9 A1BOO 25 A1BOO H8 H1 H 0 1 N N N N N N 9.952 15.312 23.949 1.816 0.422 2.578 H8 A1BOO 26 A1BOO H9 H2 H 0 1 N N N N N N 9.694 16.728 22.874 0.541 -0.484 1.727 H9 A1BOO 27 A1BOO H1 H3 H 0 1 N N N N N N 9.343 14.034 24.354 -0.818 0.631 1.207 H1 A1BOO 28 A1BOO H10 H4 H 0 1 N N N N N N 4.930 12.366 25.960 -4.680 2.474 -1.043 H10 A1BOO 29 A1BOO H12 H5 H 0 1 N N N N N N 1.974 14.247 23.527 -6.767 -0.296 1.437 H12 A1BOO 30 A1BOO H16 H6 H 0 1 N N N N N N 7.974 8.890 24.717 -1.538 -3.911 0.782 H16 A1BOO 31 A1BOO H18 H7 H 0 1 N N N N N N 11.290 10.168 22.395 -0.858 -2.606 -3.221 H18 A1BOO 32 A1BOO H7 H8 H 0 1 N N N N N N 11.763 14.506 22.560 2.472 -1.936 2.449 H7 A1BOO 33 A1BOO H6 H9 H 0 1 N N N N N N 12.062 16.237 22.935 2.214 -1.943 0.688 H6 A1BOO 34 A1BOO H5 H10 H 0 1 N N N N N N 12.484 15.571 20.517 4.239 -0.205 2.171 H5 A1BOO 35 A1BOO H4 H11 H 0 1 N N N N N N 11.325 16.925 20.743 4.623 -1.684 1.259 H4 A1BOO 36 A1BOO H21 H12 H 0 1 N N N N N N 8.309 14.625 20.141 3.059 1.735 -0.794 H21 A1BOO 37 A1BOO H20 H13 H 0 1 N N N N N N 8.725 16.314 20.589 3.453 1.869 0.938 H20 A1BOO 38 A1BOO H H14 H 0 1 N N N N N N 10.674 14.002 20.182 3.700 -0.637 -0.802 H A1BOO 39 A1BOO H2 H15 H 0 1 N N N N N N 10.035 16.938 17.353 6.230 -1.400 -0.266 H2 A1BOO 40 A1BOO H3 H16 H 0 1 N N N N N N 9.751 17.276 19.028 7.337 -0.150 -0.461 H3 A1BOO 41 A1BOO H19 H17 H 0 1 N N N N N N 10.639 12.511 22.750 -0.560 -0.297 -2.418 H19 A1BOO 42 A1BOO H17 H18 H 0 1 N N N N N N 9.964 8.361 23.381 -1.355 -4.411 -1.622 H17 A1BOO 43 A1BOO H15 H19 H 0 1 N N N N N N 7.335 11.229 25.113 -1.234 -1.603 1.585 H15 A1BOO 44 A1BOO H14 H20 H 0 1 N N N N N N 6.092 15.224 23.005 -2.514 -0.464 1.188 H14 A1BOO 45 A1BOO H13 H21 H 0 1 N N N N N N 3.727 15.526 22.382 -4.632 -1.328 2.095 H13 A1BOO 46 A1BOO H11 H22 H 0 1 N N N N N N 2.572 12.679 25.319 -6.792 1.604 -0.127 H11 A1BOO 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BOO N C SING N N 1 A1BOO O C DOUB N N 2 A1BOO C C1 SING N N 3 A1BOO C1 C2 SING N N 4 A1BOO C2 C3 SING N N 5 A1BOO C3 C4 SING N N 6 A1BOO C4 N1 SING N N 7 A1BOO N1 C5 SING N N 8 A1BOO C5 O1 DOUB N N 9 A1BOO C6 C5 SING N N 10 A1BOO S C6 SING N N 11 A1BOO C7 S SING N N 12 A1BOO C7 C8 DOUB Y N 13 A1BOO C8 C9 SING Y N 14 A1BOO C9 C10 DOUB Y N 15 A1BOO C10 C11 SING Y N 16 A1BOO C11 C12 DOUB Y N 17 A1BOO C12 C7 SING Y N 18 A1BOO C13 C6 SING N N 19 A1BOO C13 C14 DOUB Y N 20 A1BOO C14 C15 SING Y N 21 A1BOO C15 C16 DOUB Y N 22 A1BOO C16 C17 SING Y N 23 A1BOO C17 C18 DOUB Y N 24 A1BOO C18 C13 SING Y N 25 A1BOO C19 N1 SING N N 26 A1BOO C1 C19 SING N N 27 A1BOO C4 H8 SING N N 28 A1BOO C4 H9 SING N N 29 A1BOO C6 H1 SING N N 30 A1BOO C8 H10 SING N N 31 A1BOO C10 H12 SING N N 32 A1BOO C15 H16 SING N N 33 A1BOO C17 H18 SING N N 34 A1BOO C3 H7 SING N N 35 A1BOO C3 H6 SING N N 36 A1BOO C2 H5 SING N N 37 A1BOO C2 H4 SING N N 38 A1BOO C19 H21 SING N N 39 A1BOO C19 H20 SING N N 40 A1BOO C1 H SING N N 41 A1BOO N H2 SING N N 42 A1BOO N H3 SING N N 43 A1BOO C18 H19 SING N N 44 A1BOO C16 H17 SING N N 45 A1BOO C14 H15 SING N N 46 A1BOO C12 H14 SING N N 47 A1BOO C11 H13 SING N N 48 A1BOO C9 H11 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BOO SMILES ACDLabs 14.52 "O=C(C(Sc1ccccc1)c1ccccc1)N1CCCC(C1)C(N)=O" A1BOO InChI InChI 1.06 "InChI=1S/C20H22N2O2S/c21-19(23)16-10-7-13-22(14-16)20(24)18(15-8-3-1-4-9-15)25-17-11-5-2-6-12-17/h1-6,8-9,11-12,16,18H,7,10,13-14H2,(H2,21,23)/t16-,18+/m0/s1" A1BOO InChIKey InChI 1.06 XCKSWRSDIRLLDZ-FUHWJXTLSA-N A1BOO SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)[C@@H](Sc2ccccc2)c3ccccc3" A1BOO SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)[CH](Sc2ccccc2)c3ccccc3" A1BOO SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)[C@@H](C(=O)N2CCC[C@@H](C2)C(=O)N)Sc3ccccc3" A1BOO SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)C(C(=O)N2CCCC(C2)C(=O)N)Sc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BOO "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(2R)-2-phenyl-2-(phenylsulfanyl)acetyl]piperidine-3-carboxamide" A1BOO "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[(2~{S})-2-phenyl-2-phenylsulfanyl-ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BOO "Create component" 2025-01-10 RCSB A1BOO "Initial release" 2025-02-26 RCSB #