data_A1BOX # _chem_comp.id A1BOX _chem_comp.name "(3S)-1-{[3-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H20 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 292.397 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BOX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HY4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BOX N1 N1 N 0 1 N N N N N N 23.795 13.802 15.078 4.800 2.487 -0.692 N1 A1BOX 1 A1BOX C4 C1 C 0 1 Y N N N N N 25.263 10.087 9.303 -2.136 -0.971 -1.682 C4 A1BOX 2 A1BOX C5 C2 C 0 1 Y N N N N N 25.831 11.165 8.643 -1.823 -0.905 -0.336 C5 A1BOX 3 A1BOX C6 C3 C 0 1 N N N N N N 25.295 12.550 8.839 -0.483 -1.395 0.149 C6 A1BOX 4 A1BOX C7 C4 C 0 1 N N N N N N 25.749 13.085 10.180 0.508 -0.259 0.121 C7 A1BOX 5 A1BOX C8 C5 C 0 1 N N N N N N 24.003 14.854 9.884 2.217 -1.790 0.975 C8 A1BOX 6 A1BOX C10 C6 C 0 1 N N N N N N 22.773 15.070 12.067 4.520 -1.124 0.275 C10 A1BOX 7 A1BOX C13 C7 C 0 1 N N N N N N 25.245 14.615 12.001 2.757 0.632 0.492 C13 A1BOX 8 A1BOX O1 O1 O 0 1 N N N N N N 24.531 15.862 14.508 6.134 0.982 0.244 O1 A1BOX 9 A1BOX C12 C8 C 0 1 N N N N N N 24.099 14.742 14.196 5.050 1.245 -0.232 C12 A1BOX 10 A1BOX C11 C9 C 0 1 N N S N N N 23.941 14.339 12.742 3.983 0.184 -0.310 C11 A1BOX 11 A1BOX C9 C10 C 0 1 N N N N N N 22.663 14.682 10.592 3.448 -2.211 0.167 C9 A1BOX 12 A1BOX N N2 N 0 1 N N N N N N 25.077 14.166 10.619 1.780 -0.465 0.515 N A1BOX 13 A1BOX O O2 O 0 1 N N N N N N 26.641 12.544 10.828 0.160 0.840 -0.257 O A1BOX 14 A1BOX C3 C11 C 0 1 Y N N N N N 25.721 8.810 9.074 -3.362 -0.517 -2.133 C3 A1BOX 15 A1BOX C2 C12 C 0 1 Y N N N N N 26.759 8.594 8.186 -4.278 0.004 -1.240 C2 A1BOX 16 A1BOX C14 C13 C 0 1 Y N N N N N 26.869 10.944 7.751 -2.736 -0.390 0.563 C14 A1BOX 17 A1BOX C1 C14 C 0 1 Y N N N N N 27.327 9.664 7.512 -3.967 0.072 0.112 C1 A1BOX 18 A1BOX S S1 S 0 1 N N N N N N 28.582 9.404 6.305 -5.132 0.736 1.255 S A1BOX 19 A1BOX C C15 C 0 1 N N N N N N 29.059 11.052 5.787 -6.537 1.176 0.195 C A1BOX 20 A1BOX H15 H1 H 0 1 N N N N N N 23.910 13.978 16.056 5.487 3.170 -0.642 H15 A1BOX 21 A1BOX H16 H2 H 0 1 N N N N N N 23.450 12.917 14.766 3.935 2.697 -1.077 H16 A1BOX 22 A1BOX H6 H3 H 0 1 N N N N N N 24.456 10.250 10.002 -1.420 -1.374 -2.382 H6 A1BOX 23 A1BOX H7 H4 H 0 1 N N N N N N 25.670 13.204 8.038 -0.580 -1.767 1.169 H7 A1BOX 24 A1BOX H8 H5 H 0 1 N N N N N N 24.196 12.525 8.808 -0.133 -2.198 -0.499 H8 A1BOX 25 A1BOX H9 H6 H 0 1 N N N N N N 24.241 15.926 9.818 1.415 -2.513 0.821 H9 A1BOX 26 A1BOX H10 H7 H 0 1 N N N N N N 23.932 14.432 8.871 2.471 -1.747 2.033 H10 A1BOX 27 A1BOX H13 H8 H 0 1 N N N N N N 22.936 16.155 12.142 5.407 -1.432 -0.278 H13 A1BOX 28 A1BOX H14 H9 H 0 1 N N N N N N 21.837 14.803 12.580 4.780 -0.974 1.323 H14 A1BOX 29 A1BOX H17 H10 H 0 1 N N N N N N 25.466 15.692 12.020 3.057 0.876 1.512 H17 A1BOX 30 A1BOX H18 H11 H 0 1 N N N N N N 26.070 14.063 12.476 2.314 1.510 0.022 H18 A1BOX 31 A1BOX H H12 H 0 1 N N N N N N 23.741 13.258 12.700 3.700 0.028 -1.351 H A1BOX 32 A1BOX H11 H13 H 0 1 N N N N N N 21.913 15.323 10.106 3.840 -3.149 0.563 H11 A1BOX 33 A1BOX H12 H14 H 0 1 N N N N N N 22.349 13.630 10.518 3.170 -2.345 -0.878 H12 A1BOX 34 A1BOX H5 H15 H 0 1 N N N N N N 25.269 7.975 9.589 -3.603 -0.570 -3.184 H5 A1BOX 35 A1BOX H4 H16 H 0 1 N N N N N N 27.127 7.593 8.018 -5.235 0.359 -1.593 H4 A1BOX 36 A1BOX H19 H17 H 0 1 N N N N N N 27.323 11.780 7.239 -2.490 -0.339 1.613 H19 A1BOX 37 A1BOX H2 H18 H 0 1 N N N N N N 29.849 10.983 5.024 -7.332 1.604 0.805 H2 A1BOX 38 A1BOX H3 H19 H 0 1 N N N N N N 28.186 11.571 5.365 -6.217 1.906 -0.549 H3 A1BOX 39 A1BOX H1 H20 H 0 1 N N N N N N 29.435 11.614 6.654 -6.906 0.283 -0.308 H1 A1BOX 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BOX C S SING N N 1 A1BOX S C1 SING N N 2 A1BOX C1 C2 DOUB Y N 3 A1BOX C2 C3 SING Y N 4 A1BOX C3 C4 DOUB Y N 5 A1BOX C4 C5 SING Y N 6 A1BOX C5 C6 SING N N 7 A1BOX C6 C7 SING N N 8 A1BOX O C7 DOUB N N 9 A1BOX C7 N SING N N 10 A1BOX N C8 SING N N 11 A1BOX C8 C9 SING N N 12 A1BOX C9 C10 SING N N 13 A1BOX C10 C11 SING N N 14 A1BOX C11 C12 SING N N 15 A1BOX N1 C12 SING N N 16 A1BOX C12 O1 DOUB N N 17 A1BOX C13 C11 SING N N 18 A1BOX N C13 SING N N 19 A1BOX C14 C5 DOUB Y N 20 A1BOX C1 C14 SING Y N 21 A1BOX N1 H15 SING N N 22 A1BOX N1 H16 SING N N 23 A1BOX C4 H6 SING N N 24 A1BOX C6 H7 SING N N 25 A1BOX C6 H8 SING N N 26 A1BOX C8 H9 SING N N 27 A1BOX C8 H10 SING N N 28 A1BOX C10 H13 SING N N 29 A1BOX C10 H14 SING N N 30 A1BOX C13 H17 SING N N 31 A1BOX C13 H18 SING N N 32 A1BOX C11 H SING N N 33 A1BOX C9 H11 SING N N 34 A1BOX C9 H12 SING N N 35 A1BOX C3 H5 SING N N 36 A1BOX C2 H4 SING N N 37 A1BOX C14 H19 SING N N 38 A1BOX C H2 SING N N 39 A1BOX C H3 SING N N 40 A1BOX C H1 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BOX SMILES ACDLabs 14.52 "O=C(Cc1cccc(SC)c1)N1CCCC(C1)C(N)=O" A1BOX InChI InChI 1.06 "InChI=1S/C15H20N2O2S/c1-20-13-6-2-4-11(8-13)9-14(18)17-7-3-5-12(10-17)15(16)19/h2,4,6,8,12H,3,5,7,9-10H2,1H3,(H2,16,19)/t12-/m0/s1" A1BOX InChIKey InChI 1.06 YEEQWHOUTZRGAB-LBPRGKRZSA-N A1BOX SMILES_CANONICAL CACTVS 3.385 "CSc1cccc(CC(=O)N2CCC[C@@H](C2)C(N)=O)c1" A1BOX SMILES CACTVS 3.385 "CSc1cccc(CC(=O)N2CCC[CH](C2)C(N)=O)c1" A1BOX SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1cccc(c1)CC(=O)N2CCC[C@@H](C2)C(=O)N" A1BOX SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1cccc(c1)CC(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BOX "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-{[3-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" A1BOX "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(3-methylsulfanylphenyl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BOX "Create component" 2025-01-10 RCSB A1BOX "Initial release" 2025-02-26 RCSB #