data_A1BR1 # _chem_comp.id A1BR1 _chem_comp.name "(3S)-N~1~-[3-(cyanomethyl)phenyl]piperidine-1,3-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H18 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-14 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 286.329 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BR1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HVA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BR1 N1 N1 N 0 1 N N N N N N 7.878 14.477 23.526 0.698 0.445 0.045 N1 A1BR1 1 A1BR1 N3 N2 N 0 1 N N N N N N 10.865 15.464 17.421 -5.350 -1.881 -0.041 N3 A1BR1 2 A1BR1 C4 C1 C 0 1 Y N N N N N 6.495 11.628 25.367 3.185 -2.176 -0.634 C4 A1BR1 3 A1BR1 C5 C2 C 0 1 Y N N N N N 7.238 12.360 24.459 1.980 -1.505 -0.579 C5 A1BR1 4 A1BR1 C6 C3 C 0 1 Y N N N N N 6.954 13.702 24.267 1.918 -0.238 -0.012 C6 A1BR1 5 A1BR1 C7 C4 C 0 1 N N N N N N 7.988 14.636 22.172 -0.458 -0.244 0.114 C7 A1BR1 6 A1BR1 C8 C5 C 0 1 N N N N N N 9.993 16.030 22.654 -1.671 1.875 0.299 C8 A1BR1 7 A1BR1 C10 C6 C 0 1 N N N N N N 11.355 16.638 20.633 -4.085 1.640 -0.297 C10 A1BR1 8 A1BR1 C13 C7 C 0 1 N N N N N N 8.975 15.998 20.388 -2.855 -0.339 0.604 C13 A1BR1 9 A1BR1 O1 O1 O 0 1 N N N N N N 9.913 17.426 17.958 -6.206 0.144 0.256 O1 A1BR1 10 A1BR1 C12 C8 C 0 1 N N N N N N 10.374 16.327 18.291 -5.245 -0.537 -0.032 C12 A1BR1 11 A1BR1 C11 C9 C 0 1 N N S N N N 10.352 15.872 19.740 -3.934 0.119 -0.382 C11 A1BR1 12 A1BR1 C9 C10 C 0 1 N N N N N N 11.385 16.004 22.025 -2.764 2.307 -0.683 C9 A1BR1 13 A1BR1 N2 N3 N 0 1 N N N N N N 9.002 15.433 21.743 -1.618 0.407 0.331 N2 A1BR1 14 A1BR1 O O2 O 0 1 N N N N N N 7.200 14.165 21.381 -0.455 -1.452 -0.019 O A1BR1 15 A1BR1 C3 C11 C 0 1 Y N N N N N 5.485 12.231 26.096 4.328 -1.592 -0.120 C3 A1BR1 16 A1BR1 C14 C12 C 0 1 Y N N N N N 5.911 14.293 24.974 3.068 0.348 0.498 C14 A1BR1 17 A1BR1 C2 C13 C 0 1 Y N N N N N 5.180 13.570 25.911 4.269 -0.333 0.450 C2 A1BR1 18 A1BR1 C1 C14 C 0 1 N N N N N N 4.096 14.250 26.725 5.517 0.300 1.009 C1 A1BR1 19 A1BR1 C C15 C 0 1 N N N N N N 2.751 14.061 26.183 6.187 1.078 -0.046 C A1BR1 20 A1BR1 N N4 N 0 1 N N N N N N 1.692 13.926 25.784 6.703 1.679 -0.859 N A1BR1 21 A1BR1 H6 H1 H 0 1 N N N N N N 8.547 14.981 24.071 0.685 1.415 0.038 H6 A1BR1 22 A1BR1 H14 H2 H 0 1 N N N N N N 10.875 15.687 16.446 -6.194 -2.303 0.184 H14 A1BR1 23 A1BR1 H13 H3 H 0 1 N N N N N N 11.227 14.587 17.737 -4.581 -2.426 -0.271 H13 A1BR1 24 A1BR1 H4 H4 H 0 1 N N N N N N 6.704 10.578 25.508 3.234 -3.161 -1.074 H4 A1BR1 25 A1BR1 H5 H5 H 0 1 N N N N N N 8.035 11.888 23.903 1.087 -1.963 -0.977 H5 A1BR1 26 A1BR1 H7 H6 H 0 1 N N N N N N 9.710 17.072 22.863 -0.709 2.268 -0.028 H7 A1BR1 27 A1BR1 H8 H7 H 0 1 N N N N N N 10.010 15.459 23.594 -1.902 2.256 1.294 H8 A1BR1 28 A1BR1 H11 H8 H 0 1 N N N N N N 11.044 17.690 20.716 -4.870 1.965 -0.980 H11 A1BR1 29 A1BR1 H12 H9 H 0 1 N N N N N N 12.358 16.587 20.185 -4.351 1.922 0.722 H12 A1BR1 30 A1BR1 H15 H10 H 0 1 N N N N N N 8.694 17.060 20.442 -3.184 -0.140 1.624 H15 A1BR1 31 A1BR1 H16 H11 H 0 1 N N N N N N 8.236 15.454 19.781 -2.675 -1.407 0.480 H16 A1BR1 32 A1BR1 H H12 H 0 1 N N N N N N 10.635 14.809 19.762 -3.645 -0.162 -1.394 H A1BR1 33 A1BR1 H9 H13 H 0 1 N N N N N N 12.082 16.566 22.664 -2.879 3.391 -0.645 H9 A1BR1 34 A1BR1 H10 H14 H 0 1 N N N N N N 11.725 14.961 21.941 -2.486 2.006 -1.693 H10 A1BR1 35 A1BR1 H3 H15 H 0 1 N N N N N N 4.928 11.651 26.817 5.270 -2.119 -0.164 H3 A1BR1 36 A1BR1 H17 H16 H 0 1 N N N N N N 5.665 15.329 24.792 3.023 1.333 0.939 H17 A1BR1 37 A1BR1 H2 H17 H 0 1 N N N N N N 4.310 15.329 26.757 5.251 0.960 1.834 H2 A1BR1 38 A1BR1 H1 H18 H 0 1 N N N N N N 4.120 13.841 27.746 6.189 -0.479 1.368 H1 A1BR1 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BR1 N C TRIP N N 1 A1BR1 C C1 SING N N 2 A1BR1 C1 C2 SING N N 3 A1BR1 C2 C3 DOUB Y N 4 A1BR1 C3 C4 SING Y N 5 A1BR1 C4 C5 DOUB Y N 6 A1BR1 C5 C6 SING Y N 7 A1BR1 C6 N1 SING N N 8 A1BR1 N1 C7 SING N N 9 A1BR1 O C7 DOUB N N 10 A1BR1 C7 N2 SING N N 11 A1BR1 N2 C8 SING N N 12 A1BR1 C8 C9 SING N N 13 A1BR1 C9 C10 SING N N 14 A1BR1 C10 C11 SING N N 15 A1BR1 C11 C12 SING N N 16 A1BR1 N3 C12 SING N N 17 A1BR1 C12 O1 DOUB N N 18 A1BR1 C13 C11 SING N N 19 A1BR1 N2 C13 SING N N 20 A1BR1 C14 C6 DOUB Y N 21 A1BR1 C2 C14 SING Y N 22 A1BR1 N1 H6 SING N N 23 A1BR1 N3 H14 SING N N 24 A1BR1 N3 H13 SING N N 25 A1BR1 C4 H4 SING N N 26 A1BR1 C5 H5 SING N N 27 A1BR1 C8 H7 SING N N 28 A1BR1 C8 H8 SING N N 29 A1BR1 C10 H11 SING N N 30 A1BR1 C10 H12 SING N N 31 A1BR1 C13 H15 SING N N 32 A1BR1 C13 H16 SING N N 33 A1BR1 C11 H SING N N 34 A1BR1 C9 H9 SING N N 35 A1BR1 C9 H10 SING N N 36 A1BR1 C3 H3 SING N N 37 A1BR1 C14 H17 SING N N 38 A1BR1 C1 H2 SING N N 39 A1BR1 C1 H1 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BR1 SMILES ACDLabs 14.52 "O=C(Nc1cc(CC#N)ccc1)N1CCCC(C1)C(N)=O" A1BR1 InChI InChI 1.06 "InChI=1S/C15H18N4O2/c16-7-6-11-3-1-5-13(9-11)18-15(21)19-8-2-4-12(10-19)14(17)20/h1,3,5,9,12H,2,4,6,8,10H2,(H2,17,20)(H,18,21)/t12-/m0/s1" A1BR1 InChIKey InChI 1.06 UDNDCMKCZBQOCR-LBPRGKRZSA-N A1BR1 SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)Nc2cccc(CC#N)c2" A1BR1 SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)Nc2cccc(CC#N)c2" A1BR1 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)NC(=O)N2CCC[C@@H](C2)C(=O)N)CC#N" A1BR1 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)NC(=O)N2CCCC(C2)C(=O)N)CC#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BR1 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-N~1~-[3-(cyanomethyl)phenyl]piperidine-1,3-dicarboxamide" A1BR1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-~{N}1-[3-(cyanomethyl)phenyl]piperidine-1,3-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BR1 "Create component" 2025-01-14 RCSB A1BR1 "Initial release" 2025-02-26 RCSB #