data_A1BTS # _chem_comp.id A1BTS _chem_comp.name "[(2~{R},3~{S},4~{R},5~{R})-5-[4-[5-[(6~{R})-6-(4-chloranyl-3-fluoranyl-phenyl)-2-oxidanylidene-1,3-oxazinan-3-yl]-1~{H}-pyrazol-3-yl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H25 Cl F N4 O12 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2025-01-17 _chem_comp.pdbx_modified_date 2026-01-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 665.863 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BTS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9MW1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BTS C10 C1 C 0 1 N N N N N N -1.187 -33.991 34.190 -5.368 0.662 -0.599 C10 A1BTS 1 A1BTS C12 C2 C 0 1 N N N N N N -0.234 -31.775 33.405 -5.592 -1.288 0.884 C12 A1BTS 2 A1BTS C02 C3 C 0 1 Y N N N N N 3.353 -33.521 34.743 -9.547 -0.379 0.961 C02 A1BTS 3 A1BTS C03 C4 C 0 1 Y N N N N N 4.805 -33.924 34.907 -10.921 -0.306 1.092 C03 A1BTS 4 A1BTS C04 C5 C 0 1 Y N N N N N 5.364 -35.012 34.009 -11.729 -0.422 -0.024 C04 A1BTS 5 A1BTS C05 C6 C 0 1 Y N N N N N 4.483 -35.692 32.967 -11.160 -0.610 -1.274 C05 A1BTS 6 A1BTS C06 C7 C 0 1 Y N N N N N 3.022 -35.292 32.819 -9.784 -0.683 -1.402 C06 A1BTS 7 A1BTS C07 C8 C 0 1 Y N N N N N 2.482 -34.208 33.709 -8.979 -0.561 -0.285 C07 A1BTS 8 A1BTS C08 C9 C 0 1 N N R N N N 0.997 -33.762 33.604 -7.480 -0.639 -0.426 C08 A1BTS 9 A1BTS C09 C10 C 0 1 N N N N N N 0.162 -34.204 34.750 -6.885 0.776 -0.420 C09 A1BTS 10 A1BTS C15 C11 C 0 1 Y N N N N N -2.663 -31.839 34.057 -3.470 -0.318 0.611 C15 A1BTS 11 A1BTS C16 C12 C 0 1 Y N N N N N -3.904 -32.393 34.080 -2.541 0.490 0.036 C16 A1BTS 12 A1BTS C17 C13 C 0 1 Y N N N N N -4.785 -31.360 34.212 -1.293 0.190 0.615 C17 A1BTS 13 A1BTS C20 C14 C 0 1 Y N N N N N -6.340 -31.442 34.269 -0.001 0.837 0.281 C20 A1BTS 14 A1BTS C21 C15 C 0 1 Y N N N N N -7.075 -32.748 34.089 0.068 1.848 -0.681 C21 A1BTS 15 A1BTS C22 C16 C 0 1 Y N N N N N -8.630 -32.747 34.140 1.291 2.423 -0.961 C22 A1BTS 16 A1BTS C24 C17 C 0 1 Y N N N N N -8.600 -30.163 34.531 2.361 1.083 0.583 C24 A1BTS 17 A1BTS C25 C18 C 0 1 Y N N N N N -7.065 -30.149 34.462 1.180 0.455 0.924 C25 A1BTS 18 A1BTS C34 C19 C 0 1 N N R N N N -10.693 -31.392 34.429 3.660 2.668 -0.665 C34 A1BTS 19 A1BTS C36 C20 C 0 1 N N R N N N -11.132 -30.115 33.589 4.051 3.701 0.422 C36 A1BTS 20 A1BTS C38 C21 C 0 1 N N S N N N -12.110 -30.453 32.928 5.590 3.769 0.267 C38 A1BTS 21 A1BTS C39 C22 C 0 1 N N R N N N -11.985 -32.112 32.818 5.956 2.454 -0.448 C39 A1BTS 22 A1BTS C40 C23 C 0 1 N N N N N N -11.358 -32.663 31.548 6.938 1.652 0.408 C40 A1BTS 23 A1BTS F26 F1 F 0 1 N N N N N N 4.972 -36.674 32.167 -11.948 -0.724 -2.365 F26 A1BTS 24 A1BTS N11 N1 N 0 1 N N N N N N -1.412 -32.545 33.915 -4.834 -0.343 0.316 N11 A1BTS 25 A1BTS N18 N2 N 0 1 Y N N N N N -4.110 -30.216 34.268 -1.473 -0.764 1.505 N18 A1BTS 26 A1BTS N19 N3 N 0 1 Y N N N N N -2.766 -30.523 34.167 -2.832 -1.100 1.521 N19 A1BTS 27 A1BTS N23 N4 N 1 1 Y N N N N N -9.355 -31.454 34.378 2.384 2.030 -0.335 N23 A1BTS 28 A1BTS O13 O1 O 0 1 N N N N N N -0.368 -30.713 32.897 -5.055 -2.109 1.600 O13 A1BTS 29 A1BTS O14 O2 O 0 1 N N N N N N 1.082 -32.367 33.537 -6.919 -1.370 0.699 O14 A1BTS 30 A1BTS O29 O3 O 0 1 N N N N N N -11.419 -29.004 34.566 3.455 4.973 0.156 O29 A1BTS 31 A1BTS O30 O4 O 0 1 N N N N N N -13.433 -30.232 33.561 5.963 4.893 -0.532 O30 A1BTS 32 A1BTS O31 O5 O 0 1 N N N N N N -10.605 -33.834 31.845 7.360 0.492 -0.312 O31 A1BTS 33 A1BTS O32 O6 O 0 1 N N N N N N -11.244 -36.364 31.788 9.834 0.115 0.495 O32 A1BTS 34 A1BTS O33 O7 O 0 1 N N N N N N -9.542 -35.480 30.013 8.544 -1.817 -0.735 O33 A1BTS 35 A1BTS O35 O8 O 0 1 N N N N N N -7.173 -34.508 29.963 10.241 -3.375 0.297 O35 A1BTS 36 A1BTS O37 O9 O 0 1 N N N N N N -7.502 -36.985 30.248 7.883 -4.240 0.046 O37 A1BTS 37 A1BTS O41 O10 O 0 1 N N N N N N -8.028 -35.439 32.079 9.451 -3.912 -2.039 O41 A1BTS 38 A1BTS O42 O11 O 0 1 N N N N N N -11.955 -34.851 29.924 7.898 -1.078 1.591 O42 A1BTS 39 A1BTS O43 O12 O 0 1 N N N N N N -11.252 -32.599 33.759 4.738 1.709 -0.622 O43 A1BTS 40 A1BTS P27 P1 P 0 1 N N N N N N -10.864 -35.172 30.924 8.398 -0.583 0.289 P27 A1BTS 41 A1BTS P28 P2 P 0 1 N N N N N N -8.014 -35.606 30.589 9.056 -3.337 -0.588 P28 A1BTS 42 A1BTS CL01 CL1 CL 0 0 N N N N N N 7.065 -35.463 34.233 -13.455 -0.332 0.140 CL01 A1BTS 43 A1BTS H101 H1 H 0 0 N N N N N N -1.939 -34.344 34.911 -5.146 0.371 -1.625 H101 A1BTS 44 A1BTS H102 H2 H 0 0 N N N N N N -1.284 -34.558 33.252 -4.905 1.625 -0.386 H102 A1BTS 45 A1BTS H021 H3 H 0 0 N N N N N N 2.937 -32.742 35.365 -8.917 -0.288 1.834 H021 A1BTS 46 A1BTS H031 H4 H 0 0 N N N N N N 5.429 -33.446 35.648 -11.364 -0.160 2.066 H031 A1BTS 47 A1BTS H061 H5 H 0 0 N N N N N N 2.388 -35.776 32.091 -9.340 -0.829 -2.375 H061 A1BTS 48 A1BTS H081 H6 H 0 0 N N N N N N 0.578 -34.168 32.671 -7.224 -1.142 -1.358 H081 A1BTS 49 A1BTS H092 H7 H 0 0 N N N N N N 0.338 -35.261 34.998 -7.107 1.264 0.529 H092 A1BTS 50 A1BTS H091 H8 H 0 0 N N N N N N 0.335 -33.585 35.642 -7.308 1.356 -1.240 H091 A1BTS 51 A1BTS H161 H9 H 0 0 N N N N N N -4.145 -33.443 34.008 -2.727 1.230 -0.728 H161 A1BTS 52 A1BTS H211 H10 H 0 0 N N N N N N -6.531 -33.667 33.928 -0.822 2.175 -1.197 H211 A1BTS 53 A1BTS H221 H11 H 0 0 N N N N N N -9.182 -33.666 34.006 1.354 3.205 -1.703 H221 A1BTS 54 A1BTS H241 H12 H 0 0 N N N N N N -9.139 -29.241 34.690 3.278 0.795 1.075 H241 A1BTS 55 A1BTS H251 H13 H 0 0 N N N N N N -6.519 -29.221 34.551 1.169 -0.319 1.677 H251 A1BTS 56 A1BTS H341 H14 H 0 0 N N N N N N -11.081 -31.303 35.454 3.608 3.144 -1.645 H341 A1BTS 57 A1BTS H361 H15 H 0 0 N N N N N N -10.275 -29.819 32.966 3.775 3.345 1.415 H361 A1BTS 58 A1BTS H381 H16 H 0 0 N N N N N N -12.118 -30.054 31.903 6.070 3.820 1.244 H381 A1BTS 59 A1BTS H391 H17 H 0 0 N N N N N N -13.013 -32.499 32.878 6.399 2.671 -1.419 H391 A1BTS 60 A1BTS H402 H18 H 0 0 N N N N N N -10.693 -31.904 31.111 7.804 2.270 0.642 H402 A1BTS 61 A1BTS H401 H19 H 0 0 N N N N N N -12.152 -32.913 30.829 6.448 1.347 1.333 H401 A1BTS 62 A1BTS H191 H20 H 0 0 N N N N N N -2.009 -29.870 34.175 -3.246 -1.774 2.083 H191 A1BTS 63 A1BTS H291 H21 H 0 0 N N N N N N -10.627 -28.790 35.044 3.671 5.652 0.809 H291 A1BTS 64 A1BTS H301 H22 H 0 0 N N N N N N -13.585 -29.300 33.661 5.704 5.746 -0.157 H301 A1BTS 65 A1BTS H1 H23 H 0 1 N N N N N N -12.102 -36.681 31.531 10.223 0.463 -0.319 H1 A1BTS 66 A1BTS H2 H24 H 0 1 N N N N N N -6.734 -36.910 29.694 7.074 -4.261 -0.483 H2 A1BTS 67 A1BTS H3 H25 H 0 1 N N N N N N -7.508 -34.681 32.318 9.769 -4.825 -2.027 H3 A1BTS 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BTS O42 P27 DOUB N N 1 A1BTS O35 P28 DOUB N N 2 A1BTS O33 P28 SING N N 3 A1BTS O33 P27 SING N N 4 A1BTS O37 P28 SING N N 5 A1BTS P28 O41 SING N N 6 A1BTS P27 O32 SING N N 7 A1BTS P27 O31 SING N N 8 A1BTS C40 O31 SING N N 9 A1BTS C40 C39 SING N N 10 A1BTS F26 C05 SING N N 11 A1BTS C39 C38 SING N N 12 A1BTS C39 O43 SING N N 13 A1BTS C06 C05 DOUB Y N 14 A1BTS C06 C07 SING Y N 15 A1BTS O13 C12 DOUB N N 16 A1BTS C38 O30 SING N N 17 A1BTS C38 C36 SING N N 18 A1BTS C05 C04 SING Y N 19 A1BTS C12 O14 SING N N 20 A1BTS C12 N11 SING N N 21 A1BTS O14 C08 SING N N 22 A1BTS C36 C34 SING N N 23 A1BTS C36 O29 SING N N 24 A1BTS C08 C07 SING N N 25 A1BTS C08 C09 SING N N 26 A1BTS C07 C02 DOUB Y N 27 A1BTS O43 C34 SING N N 28 A1BTS N11 C15 SING N N 29 A1BTS N11 C10 SING N N 30 A1BTS C04 CL01 SING N N 31 A1BTS C04 C03 DOUB Y N 32 A1BTS C15 C16 DOUB Y N 33 A1BTS C15 N19 SING Y N 34 A1BTS C16 C17 SING Y N 35 A1BTS C21 C22 DOUB Y N 36 A1BTS C21 C20 SING Y N 37 A1BTS C22 N23 SING Y N 38 A1BTS N19 N18 SING Y N 39 A1BTS C10 C09 SING N N 40 A1BTS C17 N18 DOUB Y N 41 A1BTS C17 C20 SING N N 42 A1BTS C20 C25 DOUB Y N 43 A1BTS N23 C34 SING N N 44 A1BTS N23 C24 DOUB Y N 45 A1BTS C25 C24 SING Y N 46 A1BTS C02 C03 SING Y N 47 A1BTS C10 H101 SING N N 48 A1BTS C10 H102 SING N N 49 A1BTS C02 H021 SING N N 50 A1BTS C03 H031 SING N N 51 A1BTS C06 H061 SING N N 52 A1BTS C08 H081 SING N N 53 A1BTS C09 H092 SING N N 54 A1BTS C09 H091 SING N N 55 A1BTS C16 H161 SING N N 56 A1BTS C21 H211 SING N N 57 A1BTS C22 H221 SING N N 58 A1BTS C24 H241 SING N N 59 A1BTS C25 H251 SING N N 60 A1BTS C34 H341 SING N N 61 A1BTS C36 H361 SING N N 62 A1BTS C38 H381 SING N N 63 A1BTS C39 H391 SING N N 64 A1BTS C40 H402 SING N N 65 A1BTS C40 H401 SING N N 66 A1BTS N19 H191 SING N N 67 A1BTS O29 H291 SING N N 68 A1BTS O30 H301 SING N N 69 A1BTS O32 H1 SING N N 70 A1BTS O37 H2 SING N N 71 A1BTS O41 H3 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BTS SMILES ACDLabs 14.52 "Clc1ccc(cc1F)C1OC(=O)N(CC1)c1cc(n[NH]1)c1cc[n+](cc1)C1OC(COP(=O)(O)OP(=O)(O)O)C(O)C1O" A1BTS InChI InChI 1.06 "InChI=1S/C23H24ClFN4O12P2/c24-14-2-1-13(9-15(14)25)17-5-8-29(23(32)40-17)19-10-16(26-27-19)12-3-6-28(7-4-12)22-21(31)20(30)18(39-22)11-38-43(36,37)41-42(33,34)35/h1-4,6-7,9-10,17-18,20-22,30-31H,5,8,11H2,(H3,33,34,35,36,37)/p+1/t17-,18-,20-,21-,22-/m1/s1" A1BTS InChIKey InChI 1.06 IMLHYMVLERKGPF-ISMARYCFSA-O A1BTS SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)[n+]2ccc(cc2)c3cc([nH]n3)N4CC[C@@H](OC4=O)c5ccc(Cl)c(F)c5" A1BTS SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)[n+]2ccc(cc2)c3cc([nH]n3)N4CC[CH](OC4=O)c5ccc(Cl)c(F)c5" A1BTS SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1[C@H]2CCN(C(=O)O2)c3cc(n[nH]3)c4cc[n+](cc4)[C@H]5[C@@H]([C@@H]([C@H](O5)COP(=O)(O)OP(=O)(O)O)O)O)F)Cl" A1BTS SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1C2CCN(C(=O)O2)c3cc(n[nH]3)c4cc[n+](cc4)C5C(C(C(O5)COP(=O)(O)OP(=O)(O)O)O)O)F)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BTS "SYSTEMATIC NAME" ACDLabs 14.52 "4-{5-[(6R)-6-(4-chloro-3-fluorophenyl)-2-oxo-1,3-oxazinan-3-yl]-1H-pyrazol-3-yl}-1-{5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-beta-D-ribofuranosyl}pyridin-1-ium" A1BTS "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R},3~{S},4~{R},5~{R})-5-[4-[5-[(6~{R})-6-(4-chloranyl-3-fluoranyl-phenyl)-2-oxidanylidene-1,3-oxazinan-3-yl]-1~{H}-pyrazol-3-yl]pyridin-1-ium-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BTS "Create component" 2025-01-17 RCSB A1BTS "Initial release" 2026-02-04 RCSB #