data_A1BTZ
#
_chem_comp.id A1BTZ
_chem_comp.name "(2r,5r)-5-amino-2-hydroxy-5-(hydroxymethyl)-1,3,2lambda~5~-dioxaphosphinan-2-one"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H10 N O5 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2025-01-21
_chem_comp.pdbx_modified_date 2025-02-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 183.100
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1BTZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3RLH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1BTZ C02 C1 C 0 1 N N N N N N 4.434 -0.541 7.628 1.333 -0.253 0.034 C02 A1BTZ 1
A1BTZ C03 C2 C 0 1 N N N N N N 4.055 -0.980 9.047 2.736 -0.483 -0.532 C03 A1BTZ 2
A1BTZ C05 C3 C 0 1 N N N N N N 3.245 -0.461 6.629 0.746 1.020 -0.579 C05 A1BTZ 3
A1BTZ C11 C4 C 0 1 N N N N N N 5.055 0.859 7.685 0.456 -1.463 -0.287 C11 A1BTZ 4
A1BTZ N01 N1 N 0 1 N N N N N N 5.355 -1.567 7.138 1.420 -0.091 1.491 N01 A1BTZ 5
A1BTZ O04 O1 O 0 1 N N N N N N 5.199 -0.845 9.866 3.592 0.590 -0.136 O04 A1BTZ 6
A1BTZ O06 O2 O 0 1 N N N N N N 3.732 -0.253 5.308 -0.539 1.278 0.016 O06 A1BTZ 7
A1BTZ O08 O3 O 0 1 N N N N N N 5.430 1.049 3.837 -2.648 0.338 1.094 O08 A1BTZ 8
A1BTZ O09 O4 O 0 1 N N N N N N 3.577 2.304 5.143 -2.389 0.015 -1.407 O09 A1BTZ 9
A1BTZ O10 O5 O 0 1 N N N N N N 5.561 1.215 6.404 -0.838 -1.278 0.317 O10 A1BTZ 10
A1BTZ P07 P1 P 0 1 N N N N N N 4.621 1.079 5.084 -1.655 0.096 0.024 P07 A1BTZ 11
A1BTZ H1 H1 H 0 1 N N N N N N 3.244 -0.343 9.431 3.132 -1.424 -0.149 H1 A1BTZ 12
A1BTZ H2 H2 H 0 1 N N N N N N 3.724 -2.029 9.037 2.687 -0.526 -1.620 H2 A1BTZ 13
A1BTZ H3 H3 H 0 1 N N N N N N 2.588 0.375 6.911 1.413 1.859 -0.385 H3 A1BTZ 14
A1BTZ H4 H4 H 0 1 N N N N N N 2.676 -1.402 6.664 0.632 0.887 -1.655 H4 A1BTZ 15
A1BTZ H5 H5 H 0 1 N N N N N N 5.877 0.864 8.416 0.344 -1.557 -1.367 H5 A1BTZ 16
A1BTZ H6 H6 H 0 1 N N N N N N 4.288 1.586 7.990 0.920 -2.366 0.111 H6 A1BTZ 17
A1BTZ H7 H7 H 0 1 N N N N N N 6.133 -1.642 7.762 1.994 0.703 1.733 H7 A1BTZ 18
A1BTZ H8 H8 H 0 1 N N N N N N 4.880 -2.446 7.090 0.502 -0.011 1.901 H8 A1BTZ 19
A1BTZ H10 H10 H 0 1 N N N N N N 4.987 -1.112 10.753 4.499 0.510 -0.460 H10 A1BTZ 20
A1BTZ H11 H11 H 0 1 N N N N N N 3.650 2.822 4.350 -3.047 -0.690 -1.472 H11 A1BTZ 21
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1BTZ O08 P07 DOUB N N 1
A1BTZ P07 O09 SING N N 2
A1BTZ P07 O06 SING N N 3
A1BTZ P07 O10 SING N N 4
A1BTZ O06 C05 SING N N 5
A1BTZ O10 C11 SING N N 6
A1BTZ C05 C02 SING N N 7
A1BTZ N01 C02 SING N N 8
A1BTZ C02 C11 SING N N 9
A1BTZ C02 C03 SING N N 10
A1BTZ C03 O04 SING N N 11
A1BTZ C03 H1 SING N N 12
A1BTZ C03 H2 SING N N 13
A1BTZ C05 H3 SING N N 14
A1BTZ C05 H4 SING N N 15
A1BTZ C11 H5 SING N N 16
A1BTZ C11 H6 SING N N 17
A1BTZ N01 H7 SING N N 18
A1BTZ N01 H8 SING N N 19
A1BTZ O04 H10 SING N N 20
A1BTZ O09 H11 SING N N 21
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1BTZ SMILES ACDLabs 14.52 "NC1(COP(=O)(O)OC1)CO"
A1BTZ InChI InChI 1.06 "InChI=1S/C4H10NO5P/c5-4(1-6)2-9-11(7,8)10-3-4/h6H,1-3,5H2,(H,7,8)"
A1BTZ InChIKey InChI 1.06 GYRKLTGURDVUJC-UHFFFAOYSA-N
A1BTZ SMILES_CANONICAL CACTVS 3.385 "NC1(CO)CO[P](O)(=O)OC1"
A1BTZ SMILES CACTVS 3.385 "NC1(CO)CO[P](O)(=O)OC1"
A1BTZ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C1C(COP(=O)(O1)O)(CO)N"
A1BTZ SMILES "OpenEye OEToolkits" 3.1.0.0 "C1C(COP(=O)(O1)O)(CO)N"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1BTZ "SYSTEMATIC NAME" ACDLabs 14.52 "(2r,5r)-5-amino-2-hydroxy-5-(hydroxymethyl)-1,3,2lambda~5~-dioxaphosphinan-2-one"
A1BTZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5-azanyl-2-oxidanyl-2-oxidanylidene-1,3,2$l^{5}-dioxaphosphinan-5-yl)methanol"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1BTZ "Create component" 2025-01-21 RCSB
A1BTZ "Initial release" 2025-02-19 RCSB
#