data_A1BVA # _chem_comp.id A1BVA _chem_comp.name "5'-O-{[(2S,3R)-2,3-diaminobutanoyl]sulfamoyl}adenosine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H22 N8 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-28 _chem_comp.pdbx_modified_date 2025-12-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 446.439 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BVA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9N1V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BVA C02 C1 C 0 1 Y N N N N N 12.919 25.580 23.690 -5.325 -2.378 -0.120 C02 A1BVA 1 A1BVA C04 C2 C 0 1 Y N N N N N 12.252 26.701 25.575 -6.282 -0.297 -0.405 C04 A1BVA 2 A1BVA C06 C3 C 0 1 Y N N N N N 14.362 25.740 25.604 -3.991 -0.372 -0.238 C06 A1BVA 3 A1BVA C07 C4 C 0 1 Y N N N N N 14.154 25.296 24.322 -4.058 -1.768 -0.094 C07 A1BVA 4 A1BVA C09 C5 C 0 1 Y N N N N N 16.131 24.659 24.974 -1.965 -1.210 -0.003 C09 A1BVA 5 A1BVA C11 C6 C 0 1 N N R N N N 16.283 25.589 27.255 -2.086 1.294 -0.289 C11 A1BVA 6 A1BVA C13 C7 C 0 1 N N R N N N 18.128 24.346 27.810 -0.093 2.471 -0.227 C13 A1BVA 7 A1BVA C14 C8 C 0 1 N N N N N N 18.930 23.534 26.991 1.343 2.236 0.247 C14 A1BVA 8 A1BVA C18 C9 C 0 1 N N N N N N 20.464 23.475 23.611 3.317 -1.033 -0.316 C18 A1BVA 9 A1BVA C19 C10 C 0 1 N N S N N N 20.345 22.694 22.327 3.364 -2.345 0.425 C19 A1BVA 10 A1BVA C20 C11 C 0 1 N N R N N N 18.948 22.264 21.987 4.808 -2.846 0.483 C20 A1BVA 11 A1BVA C21 C12 C 0 1 N N N N N N 17.882 23.221 22.489 5.650 -1.880 1.318 C21 A1BVA 12 A1BVA C27 C13 C 0 1 N N S N N N 16.800 23.592 28.206 -0.944 3.031 0.929 C27 A1BVA 13 A1BVA C29 C14 C 0 1 N N R N N N 15.924 24.447 28.387 -2.089 2.001 1.090 C29 A1BVA 14 A1BVA N01 N1 N 0 1 N N N N N N 12.648 25.147 22.341 -5.454 -3.749 0.016 N01 A1BVA 15 A1BVA N03 N2 N 0 1 Y N N N N N 12.021 26.291 24.336 -6.396 -1.606 -0.275 N03 A1BVA 16 A1BVA N05 N3 N 0 1 Y N N N N N 13.382 26.461 26.212 -5.117 0.316 -0.392 N05 A1BVA 17 A1BVA N08 N4 N 0 1 Y N N N N N 15.263 24.613 23.952 -2.788 -2.217 0.045 N08 A1BVA 18 A1BVA N10 N5 N 0 1 Y N N N N N 15.601 25.337 25.998 -2.658 -0.050 -0.180 N10 A1BVA 19 A1BVA N17 N6 N 0 1 N N N N N N 21.065 22.721 24.651 3.653 0.109 0.315 N17 A1BVA 20 A1BVA N22 N7 N 0 1 N N N N N N 18.847 22.169 20.535 4.839 -4.180 1.099 N22 A1BVA 21 A1BVA N23 N8 N 0 1 N N N N N N 21.190 21.491 22.432 2.530 -3.332 -0.274 N23 A1BVA 22 A1BVA O12 O1 O 0 1 N N N N N N 17.583 25.554 27.091 -0.685 1.224 -0.628 O12 A1BVA 23 A1BVA O15 O2 O 0 1 N N N N N N 20.081 24.266 26.714 2.146 1.814 -0.858 O15 A1BVA 24 A1BVA O24 O3 O 0 1 N N N N N N 20.129 24.613 23.709 2.977 -1.006 -1.480 O24 A1BVA 25 A1BVA O25 O4 O 0 1 N N N N N N 21.755 22.327 27.053 3.973 2.553 0.436 O25 A1BVA 26 A1BVA O26 O5 O 0 1 N N N N N N 22.502 24.419 25.994 4.285 1.342 -1.728 O26 A1BVA 27 A1BVA O28 O6 O 0 1 N N N N N N 17.147 22.728 29.403 -1.467 4.316 0.588 O28 A1BVA 28 A1BVA O30 O7 O 0 1 N N N N N N 15.899 25.121 29.700 -3.336 2.659 1.324 O30 A1BVA 29 A1BVA S16 S1 S 0 1 N N N N N N 21.358 23.436 26.130 3.602 1.550 -0.500 S16 A1BVA 30 A1BVA H041 H1 H 0 0 N N N N N N 11.480 27.257 26.086 -7.178 0.293 -0.528 H041 A1BVA 31 A1BVA H091 H2 H 0 0 N N N N N N 17.115 24.213 24.970 -0.891 -1.283 0.083 H091 A1BVA 32 A1BVA H111 H3 H 0 0 N N N N N N 15.954 26.557 27.660 -2.633 1.884 -1.024 H111 A1BVA 33 A1BVA H131 H4 H 0 0 N N N N N N 18.658 24.654 28.724 -0.097 3.170 -1.063 H131 A1BVA 34 A1BVA H141 H5 H 0 0 N N N N N N 18.399 23.293 26.058 1.747 3.162 0.656 H141 A1BVA 35 A1BVA H142 H6 H 0 0 N N N N N N 19.189 22.603 27.516 1.351 1.465 1.017 H142 A1BVA 36 A1BVA H191 H7 H 0 0 N N N N N N 20.724 23.320 21.506 2.987 -2.203 1.438 H191 A1BVA 37 A1BVA H201 H8 H 0 0 N N N N N N 18.765 21.274 22.430 5.214 -2.903 -0.527 H201 A1BVA 38 A1BVA H213 H9 H 0 0 N N N N N N 17.947 23.302 23.584 5.628 -0.890 0.861 H213 A1BVA 39 A1BVA H211 H10 H 0 0 N N N N N N 18.038 24.212 22.038 5.245 -1.823 2.328 H211 A1BVA 40 A1BVA H212 H11 H 0 0 N N N N N N 16.888 22.843 22.208 6.679 -2.237 1.359 H212 A1BVA 41 A1BVA H271 H12 H 0 0 N N N N N N 16.551 22.921 27.371 -0.354 3.091 1.844 H271 A1BVA 42 A1BVA H291 H13 H 0 0 N N N N N N 14.914 24.076 28.157 -1.868 1.295 1.890 H291 A1BVA 43 A1BVA H011 H14 H 0 0 N N N N N N 11.745 25.472 22.061 -4.665 -4.301 0.132 H011 A1BVA 44 A1BVA H012 H15 H 0 0 N N N N N N 13.342 25.520 21.725 -6.333 -4.157 -0.003 H012 A1BVA 45 A1BVA H171 H16 H 0 0 N N N N N N 21.312 21.764 24.499 3.925 0.088 1.245 H171 A1BVA 46 A1BVA H221 H17 H 0 0 N N N N N N 19.545 21.540 20.192 5.782 -4.533 1.149 H221 A1BVA 47 A1BVA H222 H18 H 0 0 N N N N N N 17.941 21.828 20.286 4.409 -4.167 2.012 H222 A1BVA 48 A1BVA H2 H20 H 0 1 N N N N N N 22.126 21.759 22.659 1.560 -3.055 -0.269 H2 A1BVA 49 A1BVA H231 H21 H 0 0 N N N N N N 20.832 20.894 23.150 2.859 -3.481 -1.216 H231 A1BVA 50 A1BVA H281 H23 H 0 0 N N N N N N 16.376 22.249 29.683 -2.011 4.715 1.280 H281 A1BVA 51 A1BVA H301 H24 H 0 0 N N N N N N 15.188 25.751 29.719 -3.387 3.116 2.174 H301 A1BVA 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BVA C02 N01 SING N N 1 A1BVA N03 C02 DOUB Y N 2 A1BVA C04 N03 SING Y N 3 A1BVA N05 C04 DOUB Y N 4 A1BVA C06 N05 SING Y N 5 A1BVA C07 C06 DOUB Y N 6 A1BVA N08 C07 SING Y N 7 A1BVA C09 N08 DOUB Y N 8 A1BVA N10 C09 SING Y N 9 A1BVA C11 N10 SING N N 10 A1BVA O12 C11 SING N N 11 A1BVA C13 O12 SING N N 12 A1BVA O15 C14 SING N N 13 A1BVA S16 O15 SING N N 14 A1BVA C18 N17 SING N N 15 A1BVA C21 C20 SING N N 16 A1BVA N22 C20 SING N N 17 A1BVA C20 C19 SING N N 18 A1BVA N23 C19 SING N N 19 A1BVA C19 C18 SING N N 20 A1BVA O24 C18 DOUB N N 21 A1BVA N17 S16 SING N N 22 A1BVA O25 S16 DOUB N N 23 A1BVA O26 S16 DOUB N N 24 A1BVA C14 C13 SING N N 25 A1BVA C27 C13 SING N N 26 A1BVA O28 C27 SING N N 27 A1BVA C29 C27 SING N N 28 A1BVA O30 C29 SING N N 29 A1BVA C02 C07 SING Y N 30 A1BVA C06 N10 SING Y N 31 A1BVA C11 C29 SING N N 32 A1BVA C04 H041 SING N N 33 A1BVA C09 H091 SING N N 34 A1BVA C11 H111 SING N N 35 A1BVA C13 H131 SING N N 36 A1BVA C14 H141 SING N N 37 A1BVA C14 H142 SING N N 38 A1BVA C19 H191 SING N N 39 A1BVA C20 H201 SING N N 40 A1BVA C21 H213 SING N N 41 A1BVA C21 H211 SING N N 42 A1BVA C21 H212 SING N N 43 A1BVA C27 H271 SING N N 44 A1BVA C29 H291 SING N N 45 A1BVA N01 H011 SING N N 46 A1BVA N01 H012 SING N N 47 A1BVA N17 H171 SING N N 48 A1BVA N22 H221 SING N N 49 A1BVA N22 H222 SING N N 50 A1BVA N23 H2 SING N N 51 A1BVA N23 H231 SING N N 52 A1BVA O28 H281 SING N N 53 A1BVA O30 H301 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BVA SMILES ACDLabs 14.52 "CC(N)C(N)C(=O)NS(=O)(=O)OCC1OC(n2cnc3c(N)ncnc32)C(O)C1O" A1BVA InChI InChI 1.06 "InChI=1S/C14H22N8O7S/c1-5(15)7(16)13(25)21-30(26,27)28-2-6-9(23)10(24)14(29-6)22-4-20-8-11(17)18-3-19-12(8)22/h3-7,9-10,14,23-24H,2,15-16H2,1H3,(H,21,25)(H2,17,18,19)/t5-,6-,7+,9-,10-,14-/m1/s1" A1BVA InChIKey InChI 1.06 MASQMYRALSQMDU-CKTDUXNWSA-N A1BVA SMILES_CANONICAL CACTVS 3.385 "C[C@@H](N)[C@H](N)C(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" A1BVA SMILES CACTVS 3.385 "C[CH](N)[CH](N)C(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" A1BVA SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]([C@@H](C(=O)NS(=O)(=O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)N)N" A1BVA SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C(C(=O)NS(=O)(=O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BVA "SYSTEMATIC NAME" ACDLabs 14.52 "5'-O-{[(2S,3R)-2,3-diaminobutanoyl]sulfamoyl}adenosine" A1BVA "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S},3~{R})-2,3-bis(azanyl)butanoyl]sulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BVA "Create component" 2025-01-28 RCSB A1BVA "Initial release" 2025-12-10 RCSB #