data_A1BWJ # _chem_comp.id A1BWJ _chem_comp.name "5-[(3-hydroxyphenyl)methyl]-1,3-diazinane-2,4,6-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H10 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-11 _chem_comp.pdbx_modified_date 2025-07-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.208 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BWJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9N68 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BWJ C11 C1 C 0 1 N N N N N N -13.603 19.588 -19.309 2.353 1.256 -0.075 C11 A1BWJ 1 A1BWJ C17 C2 C 0 1 Y N N N N N -15.912 20.202 -14.117 -3.466 1.382 0.721 C17 A1BWJ 2 A1BWJ C18 C3 C 0 1 Y N N N N N -17.072 20.917 -14.364 -3.987 0.144 0.396 C18 A1BWJ 3 A1BWJ C15 C4 C 0 1 Y N N N N N -15.018 20.926 -16.235 -1.410 0.808 -0.367 C15 A1BWJ 4 A1BWJ C16 C5 C 0 1 Y N N N N N -14.895 20.209 -15.057 -2.180 1.715 0.338 C16 A1BWJ 5 A1BWJ C19 C6 C 0 1 Y N N N N N -17.204 21.635 -15.545 -3.216 -0.767 -0.312 C19 A1BWJ 6 A1BWJ C05 C7 C 0 1 N N N N N N -13.851 20.853 -17.239 -0.009 1.174 -0.783 C05 A1BWJ 7 A1BWJ C06 C8 C 0 1 N N N N N N -14.365 20.735 -18.700 0.973 0.764 0.317 C06 A1BWJ 8 A1BWJ C07 C9 C 0 1 N N N N N N -14.857 21.912 -19.542 0.833 -0.729 0.542 C07 A1BWJ 9 A1BWJ C09 C10 C 0 1 N N N N N N -14.099 20.542 -21.636 3.114 -0.965 0.029 C09 A1BWJ 10 A1BWJ C21 C11 C 0 1 Y N N N N N -16.178 21.630 -16.489 -1.924 -0.432 -0.690 C21 A1BWJ 11 A1BWJ N08 N1 N 0 1 N N N N N N -14.758 21.618 -20.943 1.935 -1.492 0.377 N08 A1BWJ 12 A1BWJ N10 N2 N 0 1 N N N N N N -13.566 19.562 -20.748 3.333 0.336 -0.197 N10 A1BWJ 13 A1BWJ O12 O1 O 0 1 N N N N N N -13.140 18.723 -18.647 2.568 2.432 -0.277 O12 A1BWJ 14 A1BWJ O13 O2 O 0 1 N N N N N N -14.039 20.481 -22.820 4.054 -1.724 -0.098 O13 A1BWJ 15 A1BWJ O14 O3 O 0 1 N N N N N N -15.450 22.872 -19.176 -0.229 -1.220 0.858 O14 A1BWJ 16 A1BWJ O20 O4 O 0 1 N N N N N N -18.374 22.360 -15.787 -3.726 -1.985 -0.633 O20 A1BWJ 17 A1BWJ H1 H1 H 0 1 N N N N N N -15.801 19.644 -13.199 -4.066 2.092 1.272 H1 A1BWJ 18 A1BWJ H2 H2 H 0 1 N N N N N N -17.873 20.916 -13.639 -4.993 -0.114 0.692 H2 A1BWJ 19 A1BWJ H3 H3 H 0 1 N N N N N N -13.992 19.647 -14.868 -1.777 2.684 0.590 H3 A1BWJ 20 A1BWJ H4 H4 H 0 1 N N N N N N -13.233 19.974 -17.005 0.243 0.655 -1.707 H4 A1BWJ 21 A1BWJ H5 H5 H 0 1 N N N N N N -13.242 21.764 -17.147 0.054 2.251 -0.942 H5 A1BWJ 22 A1BWJ H6 H6 H 0 1 N N N N N N -15.326 20.235 -18.510 0.680 1.272 1.236 H6 A1BWJ 23 A1BWJ H7 H7 H 0 1 N N N N N N -16.290 22.175 -17.415 -1.322 -1.140 -1.241 H7 A1BWJ 24 A1BWJ H8 H8 H 0 1 N N N N N N -15.226 22.271 -21.539 1.871 -2.449 0.520 H8 A1BWJ 25 A1BWJ H9 H9 H 0 1 N N N N N N -13.119 18.773 -21.169 4.224 0.627 -0.446 H9 A1BWJ 26 A1BWJ H10 H10 H 0 1 N N N N N N -18.967 22.260 -15.052 -4.181 -2.008 -1.486 H10 A1BWJ 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BWJ O13 C09 DOUB N N 1 A1BWJ C09 N08 SING N N 2 A1BWJ C09 N10 SING N N 3 A1BWJ N08 C07 SING N N 4 A1BWJ N10 C11 SING N N 5 A1BWJ C07 O14 DOUB N N 6 A1BWJ C07 C06 SING N N 7 A1BWJ C11 C06 SING N N 8 A1BWJ C11 O12 DOUB N N 9 A1BWJ C06 C05 SING N N 10 A1BWJ C05 C15 SING N N 11 A1BWJ C21 C15 DOUB Y N 12 A1BWJ C21 C19 SING Y N 13 A1BWJ C15 C16 SING Y N 14 A1BWJ O20 C19 SING N N 15 A1BWJ C19 C18 DOUB Y N 16 A1BWJ C16 C17 DOUB Y N 17 A1BWJ C18 C17 SING Y N 18 A1BWJ C17 H1 SING N N 19 A1BWJ C18 H2 SING N N 20 A1BWJ C16 H3 SING N N 21 A1BWJ C05 H4 SING N N 22 A1BWJ C05 H5 SING N N 23 A1BWJ C06 H6 SING N N 24 A1BWJ C21 H7 SING N N 25 A1BWJ N08 H8 SING N N 26 A1BWJ N10 H9 SING N N 27 A1BWJ O20 H10 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BWJ SMILES ACDLabs 14.52 "O=C1NC(=O)NC(=O)C1Cc1cccc(O)c1" A1BWJ InChI InChI 1.06 "InChI=1S/C11H10N2O4/c14-7-3-1-2-6(4-7)5-8-9(15)12-11(17)13-10(8)16/h1-4,8,14H,5H2,(H2,12,13,15,16,17)" A1BWJ InChIKey InChI 1.06 VHLBCIZZFAHISJ-UHFFFAOYSA-N A1BWJ SMILES_CANONICAL CACTVS 3.385 "Oc1cccc(CC2C(=O)NC(=O)NC2=O)c1" A1BWJ SMILES CACTVS 3.385 "Oc1cccc(CC2C(=O)NC(=O)NC2=O)c1" A1BWJ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)O)CC2C(=O)NC(=O)NC2=O" A1BWJ SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)O)CC2C(=O)NC(=O)NC2=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BWJ "SYSTEMATIC NAME" ACDLabs 14.52 "5-[(3-hydroxyphenyl)methyl]-1,3-diazinane-2,4,6-trione" A1BWJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[(3-hydroxyphenyl)methyl]-1,3-diazinane-2,4,6-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BWJ "Create component" 2025-02-11 RCSB A1BWJ "Modify PCM" 2025-02-14 RCSB A1BWJ "Initial release" 2025-07-23 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1BWJ _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C05 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #