data_A1BZ2 # _chem_comp.id A1BZ2 _chem_comp.name ;5-({2-[(2-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}ethyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid ; _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H28 Cl N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 526.029 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZ2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I80 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZ2 C1 C1 C 0 1 Y N N N N N -5.446 -0.830 16.412 -8.586 2.041 -0.057 C1 A1BZ2 1 A1BZ2 C2 C2 C 0 1 Y N N N N N -5.673 -0.674 17.777 -9.547 1.020 -0.075 C2 A1BZ2 2 A1BZ2 C6 C3 C 0 1 Y N N N N N -5.260 0.285 15.628 -7.233 1.733 -0.020 C6 A1BZ2 3 A1BZ2 C9 C4 C 0 1 N N N N N N -2.669 4.533 13.818 -1.328 -0.752 0.149 C9 A1BZ2 4 A1BZ2 C12 C5 C 0 1 N N N N N N 2.579 7.306 15.746 4.260 1.803 0.275 C12 A1BZ2 5 A1BZ2 C15 C6 C 0 1 Y N N N N N 5.194 6.594 18.412 7.590 0.596 1.577 C15 A1BZ2 6 A1BZ2 C18 C7 C 0 1 Y N N N N N 5.012 6.619 15.659 6.355 1.047 -0.865 C18 A1BZ2 7 A1BZ2 C21 C8 C 0 1 Y N N N N N 9.572 6.777 19.582 11.919 -0.009 1.261 C21 A1BZ2 8 A1BZ2 C27 C9 C 0 1 Y N N N N N -5.968 5.615 19.115 -6.493 -4.596 0.042 C27 A1BZ2 9 A1BZ2 C29 C10 C 0 1 Y N N N N N -5.714 3.066 18.093 -7.372 -2.021 0.002 C29 A1BZ2 10 A1BZ2 CL CL1 CL 0 0 N N N N N N 7.599 5.975 15.310 8.503 0.267 -2.315 CL A1BZ2 11 A1BZ2 C17 C11 C 0 1 Y N N N N N 6.213 6.329 16.283 7.652 0.572 -0.833 C17 A1BZ2 12 A1BZ2 C16 C12 C 0 1 Y N N N N N 6.337 6.315 17.663 8.278 0.344 0.392 C16 A1BZ2 13 A1BZ2 C19 C13 C 0 1 Y N N N N N 7.640 6.031 18.331 9.671 -0.166 0.433 C19 A1BZ2 14 A1BZ2 C24 C14 C 0 1 Y N N N N N 8.194 4.749 18.306 10.030 -1.280 -0.322 C24 A1BZ2 15 A1BZ2 C23 C15 C 0 1 Y N N N N N 9.418 4.493 18.906 11.326 -1.753 -0.276 C23 A1BZ2 16 A1BZ2 C22 C16 C 0 1 Y N N N N N 10.100 5.501 19.556 12.269 -1.119 0.514 C22 A1BZ2 17 A1BZ2 C20 C17 C 0 1 Y N N N N N 8.357 7.045 18.970 10.624 0.469 1.227 C20 A1BZ2 18 A1BZ2 C14 C18 C 0 1 Y N N N N N 3.989 6.891 17.795 6.293 1.066 1.533 C14 A1BZ2 19 A1BZ2 C13 C19 C 0 1 Y N N N N N 3.878 6.913 16.411 5.677 1.291 0.315 C13 A1BZ2 20 A1BZ2 N3 N1 N 0 1 N N N N N N 1.790 6.177 15.237 3.329 0.667 0.259 N3 A1BZ2 21 A1BZ2 C11 C20 C 0 1 N N N N N N 0.369 6.510 15.058 1.935 1.130 0.219 C11 A1BZ2 22 A1BZ2 C10 C21 C 0 1 N N N N N N -0.422 5.356 14.459 0.997 -0.079 0.204 C10 A1BZ2 23 A1BZ2 N2 N2 N 0 1 N N N N N N -1.878 5.579 14.489 -0.397 0.384 0.165 N2 A1BZ2 24 A1BZ2 C8 C22 C 0 1 N N N N N N -4.161 4.845 13.759 -2.767 -0.231 0.108 C8 A1BZ2 25 A1BZ2 N1 N3 N 0 1 N N N N N N -4.707 4.967 15.104 -3.695 -1.364 0.092 N1 A1BZ2 26 A1BZ2 C7 C23 C 0 1 Y N N N N N -5.197 3.890 15.857 -5.058 -1.140 0.055 C7 A1BZ2 27 A1BZ2 C25 C24 C 0 1 Y N N N N N -5.569 4.179 17.226 -5.980 -2.275 0.040 C25 A1BZ2 28 A1BZ2 C28 C25 C 0 1 Y N N N N N -5.950 3.348 19.462 -8.256 -3.097 -0.014 C28 A1BZ2 29 A1BZ2 N4 N4 N 0 1 Y N N N N N -6.066 4.579 19.970 -7.787 -4.328 0.007 N4 A1BZ2 30 A1BZ2 C26 C26 C 0 1 Y N N N N N -5.730 5.482 17.776 -5.550 -3.604 0.062 C26 A1BZ2 31 A1BZ2 C4 C27 C 0 1 Y N N N N N -5.581 1.731 17.566 -7.809 -0.622 -0.019 C4 A1BZ2 32 A1BZ2 C3 C28 C 0 1 Y N N N N N -5.748 0.565 18.336 -9.164 -0.288 -0.056 C3 A1BZ2 33 A1BZ2 N N5 N 0 1 Y N N N N N -5.122 2.655 15.347 -5.514 0.090 0.035 N A1BZ2 34 A1BZ2 C5 C29 C 0 1 Y N N N N N -5.314 1.582 16.189 -6.824 0.393 -0.000 C5 A1BZ2 35 A1BZ2 C C30 C 0 1 N N N N N N -5.171 -2.188 15.872 -9.016 3.454 -0.084 C A1BZ2 36 A1BZ2 O1 O1 O 0 1 N N N N N N -4.756 -3.067 16.613 -10.328 3.758 -0.126 O1 A1BZ2 37 A1BZ2 O O2 O 0 1 N N N N N N -5.207 -2.296 14.579 -8.187 4.342 -0.069 O A1BZ2 38 A1BZ2 H1 H1 H 0 1 N N N N N N -5.791 -1.548 18.401 -10.597 1.272 -0.104 H1 A1BZ2 39 A1BZ2 H2 H2 H 0 1 N N N N N N -5.070 0.168 14.571 -6.497 2.524 -0.007 H2 A1BZ2 40 A1BZ2 H3 H3 H 0 1 N N N N N N -2.532 3.588 14.364 -1.139 -1.365 -0.732 H3 A1BZ2 41 A1BZ2 H4 H4 H 0 1 N N N N N N -2.296 4.420 12.790 -1.185 -1.352 1.048 H4 A1BZ2 42 A1BZ2 H5 H5 H 0 1 N N N N N N 2.813 7.971 14.901 4.070 2.417 1.155 H5 A1BZ2 43 A1BZ2 H6 H6 H 0 1 N N N N N N 1.967 7.849 16.481 4.116 2.403 -0.624 H6 A1BZ2 44 A1BZ2 H7 H7 H 0 1 N N N N N N 5.249 6.578 19.490 8.070 0.421 2.529 H7 A1BZ2 45 A1BZ2 H8 H8 H 0 1 N N N N N N 4.954 6.617 14.581 5.869 1.225 -1.813 H8 A1BZ2 46 A1BZ2 H9 H9 H 0 1 N N N N N N 10.108 7.570 20.082 12.659 0.483 1.875 H9 A1BZ2 47 A1BZ2 H10 H10 H 0 1 N N N N N N -6.085 6.612 19.512 -6.170 -5.627 0.057 H10 A1BZ2 48 A1BZ2 H11 H11 H 0 1 N N N N N N 7.663 3.948 17.814 9.295 -1.776 -0.938 H11 A1BZ2 49 A1BZ2 H12 H12 H 0 1 N N N N N N 9.839 3.499 18.864 11.606 -2.617 -0.860 H12 A1BZ2 50 A1BZ2 H13 H13 H 0 1 N N N N N N 11.042 5.293 20.042 13.282 -1.492 0.547 H13 A1BZ2 51 A1BZ2 H14 H14 H 0 1 N N N N N N 7.961 8.049 18.988 10.351 1.333 1.814 H14 A1BZ2 52 A1BZ2 H15 H15 H 0 1 N N N N N N 3.122 7.109 18.401 5.758 1.258 2.451 H15 A1BZ2 53 A1BZ2 H16 H16 H 0 1 N N N N N N 1.861 5.419 15.885 3.486 0.060 1.050 H16 A1BZ2 54 A1BZ2 H18 H18 H 0 1 N N N N N N 0.291 7.379 14.388 1.729 1.739 1.100 H18 A1BZ2 55 A1BZ2 H19 H19 H 0 1 N N N N N N -0.061 6.763 16.038 1.775 1.725 -0.680 H19 A1BZ2 56 A1BZ2 H20 H20 H 0 1 N N N N N N -0.195 4.443 15.029 1.203 -0.688 -0.676 H20 A1BZ2 57 A1BZ2 H21 H21 H 0 1 N N N N N N -0.109 5.222 13.413 1.156 -0.674 1.103 H21 A1BZ2 58 A1BZ2 H22 H22 H 0 1 N N N N N N -2.070 6.452 14.040 -0.554 0.991 -0.626 H22 A1BZ2 59 A1BZ2 H24 H24 H 0 1 N N N N N N -4.312 5.791 13.219 -2.957 0.382 0.988 H24 A1BZ2 60 A1BZ2 H25 H25 H 0 1 N N N N N N -4.681 4.033 13.229 -2.910 0.368 -0.791 H25 A1BZ2 61 A1BZ2 H26 H26 H 0 1 N N N N N N -3.978 5.373 15.656 -3.354 -2.272 0.108 H26 A1BZ2 62 A1BZ2 H27 H27 H 0 1 N N N N N N -6.042 2.512 20.140 -9.321 -2.923 -0.042 H27 A1BZ2 63 A1BZ2 H28 H28 H 0 1 N N N N N N -5.665 6.355 17.143 -4.497 -3.843 0.091 H28 A1BZ2 64 A1BZ2 H29 H29 H 0 1 N N N N N N -5.940 0.655 19.395 -9.911 -1.067 -0.070 H29 A1BZ2 65 A1BZ2 H30 H30 H 0 1 N N N N N N -4.476 -3.813 16.095 -10.561 4.696 -0.142 H30 A1BZ2 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZ2 C8 C9 SING N N 1 A1BZ2 C8 N1 SING N N 2 A1BZ2 C9 N2 SING N N 3 A1BZ2 C10 N2 SING N N 4 A1BZ2 C10 C11 SING N N 5 A1BZ2 O C DOUB N N 6 A1BZ2 C11 N3 SING N N 7 A1BZ2 N1 C7 SING N N 8 A1BZ2 N3 C12 SING N N 9 A1BZ2 CL C17 SING N N 10 A1BZ2 N C7 DOUB Y N 11 A1BZ2 N C5 SING Y N 12 A1BZ2 C6 C5 DOUB Y N 13 A1BZ2 C6 C1 SING Y N 14 A1BZ2 C18 C17 DOUB Y N 15 A1BZ2 C18 C13 SING Y N 16 A1BZ2 C12 C13 SING N N 17 A1BZ2 C7 C25 SING Y N 18 A1BZ2 C C1 SING N N 19 A1BZ2 C O1 SING N N 20 A1BZ2 C5 C4 SING Y N 21 A1BZ2 C17 C16 SING Y N 22 A1BZ2 C13 C14 DOUB Y N 23 A1BZ2 C1 C2 DOUB Y N 24 A1BZ2 C25 C26 DOUB Y N 25 A1BZ2 C25 C29 SING Y N 26 A1BZ2 C4 C29 SING Y N 27 A1BZ2 C4 C3 DOUB Y N 28 A1BZ2 C16 C19 SING N N 29 A1BZ2 C16 C15 DOUB Y N 30 A1BZ2 C26 C27 SING Y N 31 A1BZ2 C2 C3 SING Y N 32 A1BZ2 C14 C15 SING Y N 33 A1BZ2 C29 C28 DOUB Y N 34 A1BZ2 C24 C19 DOUB Y N 35 A1BZ2 C24 C23 SING Y N 36 A1BZ2 C19 C20 SING Y N 37 A1BZ2 C23 C22 DOUB Y N 38 A1BZ2 C20 C21 DOUB Y N 39 A1BZ2 C27 N4 DOUB Y N 40 A1BZ2 C28 N4 SING Y N 41 A1BZ2 C22 C21 SING Y N 42 A1BZ2 C2 H1 SING N N 43 A1BZ2 C6 H2 SING N N 44 A1BZ2 C9 H3 SING N N 45 A1BZ2 C9 H4 SING N N 46 A1BZ2 C12 H5 SING N N 47 A1BZ2 C12 H6 SING N N 48 A1BZ2 C15 H7 SING N N 49 A1BZ2 C18 H8 SING N N 50 A1BZ2 C21 H9 SING N N 51 A1BZ2 C27 H10 SING N N 52 A1BZ2 C24 H11 SING N N 53 A1BZ2 C23 H12 SING N N 54 A1BZ2 C22 H13 SING N N 55 A1BZ2 C20 H14 SING N N 56 A1BZ2 C14 H15 SING N N 57 A1BZ2 N3 H16 SING N N 58 A1BZ2 C11 H18 SING N N 59 A1BZ2 C11 H19 SING N N 60 A1BZ2 C10 H20 SING N N 61 A1BZ2 C10 H21 SING N N 62 A1BZ2 N2 H22 SING N N 63 A1BZ2 C8 H24 SING N N 64 A1BZ2 C8 H25 SING N N 65 A1BZ2 N1 H26 SING N N 66 A1BZ2 C28 H27 SING N N 67 A1BZ2 C26 H28 SING N N 68 A1BZ2 C3 H29 SING N N 69 A1BZ2 O1 H30 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZ2 SMILES ACDLabs 14.52 "O=C(O)c1cc2nc(NCCNCCNCc3ccc(c4ccccc4)c(Cl)c3)c3ccncc3c2cc1" A1BZ2 InChI InChI 1.06 "InChI=1S/C30H28ClN5O2/c31-27-16-20(6-8-23(27)21-4-2-1-3-5-21)18-34-13-12-32-14-15-35-29-25-10-11-33-19-26(25)24-9-7-22(30(37)38)17-28(24)36-29/h1-11,16-17,19,32,34H,12-15,18H2,(H,35,36)(H,37,38)" A1BZ2 InChIKey InChI 1.06 NUZZUWIZRAPOCJ-UHFFFAOYSA-N A1BZ2 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(NCCNCCNCc3ccc(c(Cl)c3)c4ccccc4)c5ccncc25" A1BZ2 SMILES CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(NCCNCCNCc3ccc(c(Cl)c3)c4ccccc4)c5ccncc25" A1BZ2 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2ccc(cc2Cl)CNCCNCCNc3c4ccncc4c5ccc(cc5n3)C(=O)O" A1BZ2 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2ccc(cc2Cl)CNCCNCCNc3c4ccncc4c5ccc(cc5n3)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZ2 "SYSTEMATIC NAME" ACDLabs 14.52 ;5-({2-[(2-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}ethyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid ; A1BZ2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]ethylamino]ethylamino]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZ2 "Create component" 2025-03-12 RCSB A1BZ2 "Initial release" 2026-01-14 RCSB #