data_A1BZ3 # _chem_comp.id A1BZ3 _chem_comp.name "5-{2-[4-({[3,5-difluoro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H24 F5 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 565.489 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZ3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZ3 N1 N1 N 0 1 Y N N N N N -125.130 -179.297 312.975 -6.938 4.301 0.278 N1 A1BZ3 1 A1BZ3 C2 C1 C 0 1 Y N N N N N -124.578 -184.467 310.702 -10.420 -0.107 0.695 C2 A1BZ3 2 A1BZ3 O2 O1 O 0 1 N N N N N N -124.317 -178.791 308.064 -4.401 0.185 -1.115 O2 A1BZ3 3 A1BZ3 C4 C2 C 0 1 Y N N N N N -124.642 -182.067 310.518 -8.290 0.851 0.182 C4 A1BZ3 4 A1BZ3 O4 O2 O 0 1 N N N N N N -109.981 -176.975 311.039 10.473 0.064 0.371 O4 A1BZ3 5 A1BZ3 C5 C3 C 0 1 Y N N N N N -124.447 -182.184 309.126 -7.780 -0.422 -0.164 C5 A1BZ3 6 A1BZ3 C6 C4 C 0 1 Y N N N N N -124.321 -183.467 308.548 -8.622 -1.538 -0.071 C6 A1BZ3 7 A1BZ3 F4 F1 F 0 1 N N N N N N -111.239 -174.561 311.611 9.241 -2.165 1.399 F4 A1BZ3 8 A1BZ3 C22 C5 C 0 1 Y N N N N N -111.909 -175.516 310.929 8.538 -1.023 1.234 C22 A1BZ3 9 A1BZ3 C21 C6 C 0 1 Y N N N N N -113.203 -175.266 310.571 7.201 -0.975 1.587 C21 A1BZ3 10 A1BZ3 C23 C7 C 0 1 Y N N N N N -111.285 -176.726 310.704 9.157 0.106 0.714 C23 A1BZ3 11 A1BZ3 C26 C8 C 0 1 N N N N N N -109.721 -177.453 312.258 10.781 -0.323 -0.970 C26 A1BZ3 12 A1BZ3 F3 F2 F 0 1 N N N N N N -108.420 -177.596 312.420 10.188 0.576 -1.862 F3 A1BZ3 13 A1BZ3 F2 F3 F 0 1 N N N N N N -110.283 -178.637 312.473 12.168 -0.313 -1.151 F2 A1BZ3 14 A1BZ3 F1 F4 F 0 1 N N N N N N -110.141 -176.643 313.210 10.289 -1.610 -1.209 F1 A1BZ3 15 A1BZ3 C24 C9 C 0 1 Y N N N N N -112.039 -177.696 310.077 8.432 1.278 0.547 C24 A1BZ3 16 A1BZ3 F F5 F 0 1 N N N N N N -111.446 -178.881 309.814 9.031 2.378 0.041 F A1BZ3 17 A1BZ3 C25 C10 C 0 1 Y N N N N N -113.344 -177.496 309.705 7.094 1.317 0.897 C25 A1BZ3 18 A1BZ3 C20 C11 C 0 1 Y N N N N N -113.943 -176.270 309.967 6.481 0.193 1.419 C20 A1BZ3 19 A1BZ3 C19 C12 C 0 1 N N N N N N -115.399 -176.015 309.676 5.023 0.239 1.799 C19 A1BZ3 20 A1BZ3 N2 N2 N 0 1 N N N N N N -115.981 -176.932 308.699 4.203 -0.150 0.644 N2 A1BZ3 21 A1BZ3 C18 C13 C 0 1 N N N N N N -117.415 -176.678 308.554 2.773 -0.116 0.978 C18 A1BZ3 22 A1BZ3 C17 C14 C 0 1 N N N N N N -118.105 -177.636 307.620 1.954 -0.527 -0.247 C17 A1BZ3 23 A1BZ3 C16 C15 C 0 1 N N N N N N -119.568 -177.265 307.456 0.464 -0.492 0.101 C16 A1BZ3 24 A1BZ3 C15 C16 C 0 1 N N N N N N -120.382 -178.383 306.859 -0.356 -0.903 -1.123 C15 A1BZ3 25 A1BZ3 O3 O3 O 0 1 N N N N N N -121.771 -178.077 306.935 -1.747 -0.870 -0.799 O3 A1BZ3 26 A1BZ3 C14 C17 C 0 1 N N N N N N -122.549 -179.177 306.483 -2.605 -1.239 -1.880 C14 A1BZ3 27 A1BZ3 C13 C18 C 0 1 N N N N N N -124.021 -178.913 306.663 -4.063 -1.169 -1.421 C13 A1BZ3 28 A1BZ3 C7 C19 C 0 1 Y N N N N N -124.451 -179.893 308.833 -5.665 0.423 -0.690 C7 A1BZ3 29 A1BZ3 C8 C20 C 0 1 Y N N N N N -124.679 -179.636 310.225 -6.074 1.786 -0.361 C8 A1BZ3 30 A1BZ3 C12 C21 C 0 1 Y N N N N N -124.764 -180.762 311.075 -7.400 2.011 0.080 C12 A1BZ3 31 A1BZ3 C11 C22 C 0 1 Y N N N N N -124.990 -180.514 312.445 -7.797 3.309 0.395 C11 A1BZ3 32 A1BZ3 C10 C23 C 0 1 Y N N N N N -125.054 -178.247 312.138 -5.693 4.122 -0.131 C10 A1BZ3 33 A1BZ3 C9 C24 C 0 1 Y N N N N N -124.838 -178.351 310.798 -5.214 2.883 -0.463 C9 A1BZ3 34 A1BZ3 C3 C25 C 0 1 Y N N N N N -124.717 -183.241 311.275 -9.612 0.987 0.609 C3 A1BZ3 35 A1BZ3 N N3 N 0 1 Y N N N N N -124.349 -181.096 308.293 -6.509 -0.572 -0.578 N A1BZ3 36 A1BZ3 C1 C26 C 0 1 Y N N N N N -124.364 -184.593 309.334 -9.933 -1.378 0.357 C1 A1BZ3 37 A1BZ3 C C27 C 0 1 N N N N N N -124.055 -185.937 308.769 -10.821 -2.554 0.456 C A1BZ3 38 A1BZ3 O1 O4 O 0 1 N N N N N N -123.647 -186.821 309.501 -12.094 -2.404 0.870 O1 A1BZ3 39 A1BZ3 O O5 O 0 1 N N N N N N -124.177 -186.084 307.478 -10.403 -3.657 0.164 O A1BZ3 40 A1BZ3 H1 H1 H 0 1 N N N N N N -124.635 -185.353 311.317 -11.442 0.005 1.026 H1 A1BZ3 41 A1BZ3 H2 H2 H 0 1 N N N N N N -124.190 -183.563 307.480 -8.252 -2.519 -0.331 H2 A1BZ3 42 A1BZ3 H3 H3 H 0 1 N N N N N N -113.644 -174.298 310.756 6.719 -1.852 1.995 H3 A1BZ3 43 A1BZ3 H4 H4 H 0 1 N N N N N N -113.899 -178.282 309.214 6.529 2.228 0.767 H4 A1BZ3 44 A1BZ3 H5 H5 H 0 1 N N N N N N -115.500 -174.990 309.290 4.841 -0.450 2.623 H5 A1BZ3 45 A1BZ3 H6 H6 H 0 1 N N N N N N -115.961 -176.110 310.617 4.760 1.251 2.106 H6 A1BZ3 46 A1BZ3 H7 H7 H 0 1 N N N N N N -115.842 -177.873 309.007 4.473 -1.059 0.299 H7 A1BZ3 47 A1BZ3 H9 H9 H 0 1 N N N N N N -117.550 -175.657 308.167 2.575 -0.808 1.797 H9 A1BZ3 48 A1BZ3 H10 H10 H 0 1 N N N N N N -117.885 -176.760 309.545 2.494 0.893 1.280 H10 A1BZ3 49 A1BZ3 H11 H11 H 0 1 N N N N N N -118.034 -178.654 308.030 2.152 0.164 -1.065 H11 A1BZ3 50 A1BZ3 H12 H12 H 0 1 N N N N N N -117.611 -177.601 306.638 2.233 -1.537 -0.549 H12 A1BZ3 51 A1BZ3 H13 H13 H 0 1 N N N N N N -119.638 -176.387 306.797 0.266 -1.184 0.920 H13 A1BZ3 52 A1BZ3 H14 H14 H 0 1 N N N N N N -119.982 -177.016 308.444 0.185 0.517 0.403 H14 A1BZ3 53 A1BZ3 H15 H15 H 0 1 N N N N N N -120.184 -179.312 307.413 -0.157 -0.211 -1.942 H15 A1BZ3 54 A1BZ3 H16 H16 H 0 1 N N N N N N -120.097 -178.517 305.805 -0.077 -1.913 -1.425 H16 A1BZ3 55 A1BZ3 H17 H17 H 0 1 N N N N N N -122.272 -180.073 307.058 -2.454 -0.554 -2.714 H17 A1BZ3 56 A1BZ3 H18 H18 H 0 1 N N N N N N -122.343 -179.348 305.416 -2.373 -2.256 -2.197 H18 A1BZ3 57 A1BZ3 H19 H19 H 0 1 N N N N N N -124.292 -177.979 306.148 -4.194 -1.786 -0.531 H19 A1BZ3 58 A1BZ3 H20 H20 H 0 1 N N N N N N -124.598 -179.747 306.237 -4.712 -1.535 -2.216 H20 A1BZ3 59 A1BZ3 H21 H21 H 0 1 N N N N N N -125.054 -181.364 313.108 -8.804 3.501 0.734 H21 A1BZ3 60 A1BZ3 H22 H22 H 0 1 N N N N N N -125.172 -177.258 312.556 -5.037 4.976 -0.207 H22 A1BZ3 61 A1BZ3 H23 H23 H 0 1 N N N N N N -124.789 -177.466 310.181 -4.195 2.757 -0.795 H23 A1BZ3 62 A1BZ3 H24 H24 H 0 1 N N N N N N -124.889 -183.172 312.339 -9.996 1.962 0.871 H24 A1BZ3 63 A1BZ3 H25 H25 H 0 1 N N N N N N -123.446 -187.593 308.985 -12.637 -3.203 0.919 H25 A1BZ3 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZ3 C14 C13 SING N N 1 A1BZ3 C14 O3 SING N N 2 A1BZ3 C13 O2 SING N N 3 A1BZ3 C15 O3 SING N N 4 A1BZ3 C15 C16 SING N N 5 A1BZ3 C16 C17 SING N N 6 A1BZ3 O C DOUB N N 7 A1BZ3 C17 C18 SING N N 8 A1BZ3 O2 C7 SING N N 9 A1BZ3 N C7 DOUB Y N 10 A1BZ3 N C5 SING Y N 11 A1BZ3 C6 C5 DOUB Y N 12 A1BZ3 C6 C1 SING Y N 13 A1BZ3 C18 N2 SING N N 14 A1BZ3 N2 C19 SING N N 15 A1BZ3 C C1 SING N N 16 A1BZ3 C O1 SING N N 17 A1BZ3 C7 C8 SING Y N 18 A1BZ3 C5 C4 SING Y N 19 A1BZ3 C1 C2 DOUB Y N 20 A1BZ3 C19 C20 SING N N 21 A1BZ3 C25 C20 DOUB Y N 22 A1BZ3 C25 C24 SING Y N 23 A1BZ3 F C24 SING N N 24 A1BZ3 C20 C21 SING Y N 25 A1BZ3 C24 C23 DOUB Y N 26 A1BZ3 C8 C9 DOUB Y N 27 A1BZ3 C8 C12 SING Y N 28 A1BZ3 C4 C12 SING Y N 29 A1BZ3 C4 C3 DOUB Y N 30 A1BZ3 C21 C22 DOUB Y N 31 A1BZ3 C2 C3 SING Y N 32 A1BZ3 C23 C22 SING Y N 33 A1BZ3 C23 O4 SING N N 34 A1BZ3 C9 C10 SING Y N 35 A1BZ3 C22 F4 SING N N 36 A1BZ3 O4 C26 SING N N 37 A1BZ3 C12 C11 DOUB Y N 38 A1BZ3 C10 N1 DOUB Y N 39 A1BZ3 C26 F3 SING N N 40 A1BZ3 C26 F2 SING N N 41 A1BZ3 C26 F1 SING N N 42 A1BZ3 C11 N1 SING Y N 43 A1BZ3 C2 H1 SING N N 44 A1BZ3 C6 H2 SING N N 45 A1BZ3 C21 H3 SING N N 46 A1BZ3 C25 H4 SING N N 47 A1BZ3 C19 H5 SING N N 48 A1BZ3 C19 H6 SING N N 49 A1BZ3 N2 H7 SING N N 50 A1BZ3 C18 H9 SING N N 51 A1BZ3 C18 H10 SING N N 52 A1BZ3 C17 H11 SING N N 53 A1BZ3 C17 H12 SING N N 54 A1BZ3 C16 H13 SING N N 55 A1BZ3 C16 H14 SING N N 56 A1BZ3 C15 H15 SING N N 57 A1BZ3 C15 H16 SING N N 58 A1BZ3 C14 H17 SING N N 59 A1BZ3 C14 H18 SING N N 60 A1BZ3 C13 H19 SING N N 61 A1BZ3 C13 H20 SING N N 62 A1BZ3 C11 H21 SING N N 63 A1BZ3 C10 H22 SING N N 64 A1BZ3 C9 H23 SING N N 65 A1BZ3 C3 H24 SING N N 66 A1BZ3 O1 H25 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZ3 SMILES ACDLabs 14.52 "FC(F)(F)Oc1c(F)cc(cc1F)CNCCCCOCCOc1nc2cc(ccc2c2cnccc12)C(=O)O" A1BZ3 InChI InChI 1.06 "InChI=1S/C27H24F5N3O5/c28-21-11-16(12-22(29)24(21)40-27(30,31)32)14-33-6-1-2-8-38-9-10-39-25-19-5-7-34-15-20(19)18-4-3-17(26(36)37)13-23(18)35-25/h3-5,7,11-13,15,33H,1-2,6,8-10,14H2,(H,36,37)" A1BZ3 InChIKey InChI 1.06 VQXFVWAFGKCRFO-UHFFFAOYSA-N A1BZ3 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(OCCOCCCCNCc3cc(F)c(OC(F)(F)F)c(F)c3)c4ccncc24" A1BZ3 SMILES CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(OCCOCCCCNCc3cc(F)c(OC(F)(F)F)c(F)c3)c4ccncc24" A1BZ3 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1C(=O)O)nc(c3c2cncc3)OCCOCCCCNCc4cc(c(c(c4)F)OC(F)(F)F)F" A1BZ3 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1C(=O)O)nc(c3c2cncc3)OCCOCCCCNCc4cc(c(c(c4)F)OC(F)(F)F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZ3 "SYSTEMATIC NAME" ACDLabs 14.52 "5-{2-[4-({[3,5-difluoro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid" A1BZ3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[4-[[3,5-bis(fluoranyl)-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]ethoxy]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZ3 "Create component" 2025-03-12 RCSB A1BZ3 "Initial release" 2026-01-14 RCSB #