data_A1BZ6 # _chem_comp.id A1BZ6 _chem_comp.name "5-({(2R)-1-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]propan-2-yl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H28 Cl F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 576.995 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZ6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZ6 C1 C1 C 0 1 N N R N N N -5.140 5.013 13.189 4.020 1.495 -0.412 C1 A1BZ6 1 A1BZ6 N1 N1 N 0 1 N N N N N N -5.502 4.967 14.597 4.339 0.090 -0.144 N1 A1BZ6 2 A1BZ6 O1 O1 O 0 1 N N N N N N 9.009 6.542 17.767 -10.613 0.122 -0.460 O1 A1BZ6 3 A1BZ6 C2 C2 C 0 1 N N N N N N -3.636 4.566 13.027 2.628 1.591 -1.039 C2 A1BZ6 4 A1BZ6 N2 N2 N 0 1 Y N N N N N -5.501 2.638 14.867 6.619 0.557 -0.255 N2 A1BZ6 5 A1BZ6 C3 C3 C 0 1 N N N N N N -1.410 5.113 13.648 0.307 1.204 -0.581 C3 A1BZ6 6 A1BZ6 N3 N3 N 0 1 Y N N N N N -6.462 4.398 19.562 6.658 -4.321 0.688 N3 A1BZ6 7 A1BZ6 C4 C4 C 0 1 N N N N N N -0.588 6.218 14.341 -0.651 0.717 0.508 C4 A1BZ6 8 A1BZ6 C5 C5 C 0 1 N N N N N N 0.911 5.867 14.236 -2.088 0.771 -0.014 C5 A1BZ6 9 A1BZ6 C6 C6 C 0 1 N N N N N N 1.696 6.830 15.092 -3.045 0.284 1.075 C6 A1BZ6 10 A1BZ6 C7 C7 C 0 1 N N N N N N 3.750 7.494 16.074 -5.374 -0.126 1.595 C7 A1BZ6 11 A1BZ6 C8 C8 C 0 1 Y N N N N N 5.149 7.175 16.424 -6.775 -0.060 1.046 C8 A1BZ6 12 A1BZ6 C9 C9 C 0 1 Y N N N N N 5.814 8.149 17.161 -7.311 -1.151 0.386 C9 A1BZ6 13 A1BZ6 C10 C10 C 0 1 Y N N N N N 7.090 7.940 17.592 -8.596 -1.092 -0.119 C10 A1BZ6 14 A1BZ6 C11 C11 C 0 1 Y N N N N N 7.725 6.726 17.297 -9.349 0.062 0.036 C11 A1BZ6 15 A1BZ6 C12 C12 C 0 1 Y N N N N N 7.103 5.756 16.535 -8.810 1.156 0.698 C12 A1BZ6 16 A1BZ6 C13 C13 C 0 1 Y N N N N N 5.802 5.948 16.083 -7.526 1.090 1.207 C13 A1BZ6 17 A1BZ6 C14 C14 C 0 1 N N N N N N 9.192 6.041 19.040 -11.102 -1.042 -1.130 C14 A1BZ6 18 A1BZ6 C15 C15 C 0 1 Y N N N N N -5.655 3.851 15.415 5.658 -0.318 -0.077 C15 A1BZ6 19 A1BZ6 C16 C16 C 0 1 Y N N N N N -5.557 1.516 15.721 7.925 0.241 -0.206 C16 A1BZ6 20 A1BZ6 C17 C17 C 0 1 Y N N N N N -5.368 0.251 15.114 8.894 1.234 -0.406 C17 A1BZ6 21 A1BZ6 C18 C18 C 0 1 Y N N N N N -5.423 -0.852 15.948 10.241 0.903 -0.354 C18 A1BZ6 22 A1BZ6 C19 C19 C 0 1 Y N N N N N -5.682 -0.761 17.320 10.639 -0.417 -0.102 C19 A1BZ6 23 A1BZ6 C20 C20 C 0 1 Y N N N N N -5.850 0.483 17.902 9.708 -1.393 0.094 C20 A1BZ6 24 A1BZ6 O2 O2 O 0 1 N N N N N N -4.698 -3.087 16.143 12.571 1.634 -0.516 O2 A1BZ6 25 A1BZ6 C27 C21 C 0 1 N N N N N N -5.095 -2.174 15.453 11.262 1.950 -0.566 C27 A1BZ6 26 A1BZ6 O3 O3 O 0 1 N N N N N N -5.226 -2.345 14.162 10.921 3.095 -0.784 O3 A1BZ6 27 A1BZ6 C21 C22 C 0 1 Y N N N N N -5.789 1.630 17.092 8.347 -1.085 0.047 C21 A1BZ6 28 A1BZ6 C22 C23 C 0 1 Y N N N N N -5.991 2.953 17.656 7.327 -2.116 0.256 C22 A1BZ6 29 A1BZ6 C26 C24 C 0 1 Y N N N N N -5.951 4.075 16.815 5.970 -1.721 0.191 C26 A1BZ6 30 A1BZ6 C25 C25 C 0 1 Y N N N N N -6.188 5.367 17.370 4.987 -2.694 0.388 C25 A1BZ6 31 A1BZ6 C24 C26 C 0 1 Y N N N N N -6.442 5.472 18.710 5.382 -3.982 0.634 C24 A1BZ6 32 A1BZ6 C23 C27 C 0 1 Y N N N N N -6.228 3.154 19.040 7.632 -3.451 0.511 C23 A1BZ6 33 A1BZ6 C C28 C 0 1 N N N N N N -6.040 4.200 12.264 4.044 2.283 0.899 C A1BZ6 34 A1BZ6 O O4 O 0 1 N N N N N N -2.805 5.545 13.677 1.649 1.154 -0.093 O A1BZ6 35 A1BZ6 N N4 N 0 1 N N N N N N 3.137 6.504 15.143 -4.425 0.335 0.574 N A1BZ6 36 A1BZ6 CL CL1 CL 0 0 N N N N N N 8.008 4.394 16.064 -9.749 2.603 0.894 CL A1BZ6 37 A1BZ6 F F1 F 0 1 N N N N N N 8.509 4.933 19.296 -10.281 -1.329 -2.226 F A1BZ6 38 A1BZ6 F1 F2 F 0 1 N N N N N N 10.449 5.800 19.287 -11.096 -2.126 -0.247 F1 A1BZ6 39 A1BZ6 F2 F3 F 0 1 N N N N N N 8.832 6.978 19.900 -12.408 -0.809 -1.575 F2 A1BZ6 40 A1BZ6 H1 H1 H 0 1 N N N N N N -5.194 6.060 12.857 4.757 1.910 -1.099 H1 A1BZ6 41 A1BZ6 H2 H2 H 0 1 N N N N N N -4.805 5.520 15.054 3.625 -0.553 -0.013 H2 A1BZ6 42 A1BZ6 H3 H3 H 0 1 N N N N N N -3.487 3.582 13.495 2.426 2.624 -1.319 H3 A1BZ6 43 A1BZ6 H4 H4 H 0 1 N N N N N N -3.378 4.508 11.959 2.584 0.958 -1.925 H4 A1BZ6 44 A1BZ6 H5 H5 H 0 1 N N N N N N -1.297 4.161 14.188 0.215 0.564 -1.459 H5 A1BZ6 45 A1BZ6 H6 H6 H 0 1 N N N N N N -1.074 4.987 12.608 0.057 2.230 -0.853 H6 A1BZ6 46 A1BZ6 H7 H7 H 0 1 N N N N N N -0.777 7.183 13.848 -0.401 -0.309 0.780 H7 A1BZ6 47 A1BZ6 H8 H8 H 0 1 N N N N N N -0.878 6.285 15.400 -0.559 1.358 1.385 H8 A1BZ6 48 A1BZ6 H9 H9 H 0 1 N N N N N N 1.076 4.839 14.590 -2.338 1.796 -0.285 H9 A1BZ6 49 A1BZ6 H10 H10 H 0 1 N N N N N N 1.238 5.951 13.189 -2.180 0.130 -0.891 H10 A1BZ6 50 A1BZ6 H11 H11 H 0 1 N N N N N N 1.579 7.843 14.680 -2.795 -0.742 1.347 H11 A1BZ6 51 A1BZ6 H12 H12 H 0 1 N N N N N N 1.292 6.801 16.115 -2.953 0.924 1.953 H12 A1BZ6 52 A1BZ6 H13 H13 H 0 1 N N N N N N 3.726 8.484 15.596 -5.298 0.511 2.476 H13 A1BZ6 53 A1BZ6 H14 H14 H 0 1 N N N N N N 3.155 7.519 16.999 -5.140 -1.155 1.870 H14 A1BZ6 54 A1BZ6 H15 H15 H 0 1 N N N N N N 5.315 9.078 17.394 -6.724 -2.049 0.266 H15 A1BZ6 55 A1BZ6 H16 H16 H 0 1 N N N N N N 7.607 8.703 18.156 -9.013 -1.945 -0.634 H16 A1BZ6 56 A1BZ6 H17 H17 H 0 1 N N N N N N 5.300 5.195 15.493 -7.107 1.940 1.727 H17 A1BZ6 57 A1BZ6 H18 H18 H 0 1 N N N N N N -5.190 0.152 14.053 8.593 2.253 -0.600 H18 A1BZ6 58 A1BZ6 H19 H19 H 0 1 N N N N N N -5.750 -1.656 17.921 11.690 -0.663 -0.064 H19 A1BZ6 59 A1BZ6 H20 H20 H 0 1 N N N N N N -6.026 0.571 18.964 10.024 -2.408 0.287 H20 A1BZ6 60 A1BZ6 H21 H21 H 0 1 N N N N N N -4.530 -3.847 15.598 13.201 2.352 -0.661 H21 A1BZ6 61 A1BZ6 H22 H22 H 0 1 N N N N N N -6.167 6.247 16.744 3.939 -2.436 0.349 H22 A1BZ6 62 A1BZ6 H23 H23 H 0 1 N N N N N N -6.637 6.453 19.118 4.629 -4.741 0.787 H23 A1BZ6 63 A1BZ6 H24 H24 H 0 1 N N N N N N -6.224 2.300 19.702 8.662 -3.771 0.564 H24 A1BZ6 64 A1BZ6 H25 H25 H 0 1 N N N N N N -7.084 4.524 12.389 5.036 2.214 1.346 H25 A1BZ6 65 A1BZ6 H26 H26 H 0 1 N N N N N N -5.730 4.357 11.220 3.807 3.328 0.700 H26 A1BZ6 66 A1BZ6 H27 H27 H 0 1 N N N N N N -5.955 3.132 12.515 3.307 1.867 1.587 H27 A1BZ6 67 A1BZ6 H28 H28 H 0 1 N N N N N N 3.271 5.575 15.487 -4.659 1.263 0.255 H28 A1BZ6 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZ6 C C1 SING N N 1 A1BZ6 C2 C1 SING N N 2 A1BZ6 C2 O SING N N 3 A1BZ6 C1 N1 SING N N 4 A1BZ6 C3 O SING N N 5 A1BZ6 C3 C4 SING N N 6 A1BZ6 O3 C27 DOUB N N 7 A1BZ6 C5 C4 SING N N 8 A1BZ6 C5 C6 SING N N 9 A1BZ6 N1 C15 SING N N 10 A1BZ6 N2 C15 DOUB Y N 11 A1BZ6 N2 C16 SING Y N 12 A1BZ6 C6 N SING N N 13 A1BZ6 C17 C16 DOUB Y N 14 A1BZ6 C17 C18 SING Y N 15 A1BZ6 N C7 SING N N 16 A1BZ6 C15 C26 SING Y N 17 A1BZ6 C27 C18 SING N N 18 A1BZ6 C27 O2 SING N N 19 A1BZ6 C16 C21 SING Y N 20 A1BZ6 C18 C19 DOUB Y N 21 A1BZ6 CL C12 SING N N 22 A1BZ6 C7 C8 SING N N 23 A1BZ6 C13 C8 DOUB Y N 24 A1BZ6 C13 C12 SING Y N 25 A1BZ6 C8 C9 SING Y N 26 A1BZ6 C12 C11 DOUB Y N 27 A1BZ6 C26 C25 DOUB Y N 28 A1BZ6 C26 C22 SING Y N 29 A1BZ6 C21 C22 SING Y N 30 A1BZ6 C21 C20 DOUB Y N 31 A1BZ6 C9 C10 DOUB Y N 32 A1BZ6 C11 C10 SING Y N 33 A1BZ6 C11 O1 SING N N 34 A1BZ6 C19 C20 SING Y N 35 A1BZ6 C25 C24 SING Y N 36 A1BZ6 C22 C23 DOUB Y N 37 A1BZ6 O1 C14 SING N N 38 A1BZ6 C24 N3 DOUB Y N 39 A1BZ6 C23 N3 SING Y N 40 A1BZ6 C14 F1 SING N N 41 A1BZ6 C14 F SING N N 42 A1BZ6 C14 F2 SING N N 43 A1BZ6 C1 H1 SING N N 44 A1BZ6 N1 H2 SING N N 45 A1BZ6 C2 H3 SING N N 46 A1BZ6 C2 H4 SING N N 47 A1BZ6 C3 H5 SING N N 48 A1BZ6 C3 H6 SING N N 49 A1BZ6 C4 H7 SING N N 50 A1BZ6 C4 H8 SING N N 51 A1BZ6 C5 H9 SING N N 52 A1BZ6 C5 H10 SING N N 53 A1BZ6 C6 H11 SING N N 54 A1BZ6 C6 H12 SING N N 55 A1BZ6 C7 H13 SING N N 56 A1BZ6 C7 H14 SING N N 57 A1BZ6 C9 H15 SING N N 58 A1BZ6 C10 H16 SING N N 59 A1BZ6 C13 H17 SING N N 60 A1BZ6 C17 H18 SING N N 61 A1BZ6 C19 H19 SING N N 62 A1BZ6 C20 H20 SING N N 63 A1BZ6 O2 H21 SING N N 64 A1BZ6 C25 H22 SING N N 65 A1BZ6 C24 H23 SING N N 66 A1BZ6 C23 H24 SING N N 67 A1BZ6 C H25 SING N N 68 A1BZ6 C H26 SING N N 69 A1BZ6 C H27 SING N N 70 A1BZ6 N H28 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZ6 SMILES ACDLabs 14.52 "FC(F)(F)Oc1ccc(cc1Cl)CNCCCCOCC(C)Nc1nc2cc(ccc2c2cnccc12)C(=O)O" A1BZ6 InChI InChI 1.06 "InChI=1S/C28H28ClF3N4O4/c1-17(16-39-11-3-2-9-33-14-18-4-7-25(23(29)12-18)40-28(30,31)32)35-26-21-8-10-34-15-22(21)20-6-5-19(27(37)38)13-24(20)36-26/h4-8,10,12-13,15,17,33H,2-3,9,11,14,16H2,1H3,(H,35,36)(H,37,38)/t17-/m1/s1" A1BZ6 InChIKey InChI 1.06 JOQWRLVZVPMTGG-QGZVFWFLSA-N A1BZ6 SMILES_CANONICAL CACTVS 3.385 "C[C@H](COCCCCNCc1ccc(OC(F)(F)F)c(Cl)c1)Nc2nc3cc(ccc3c4cnccc24)C(O)=O" A1BZ6 SMILES CACTVS 3.385 "C[CH](COCCCCNCc1ccc(OC(F)(F)F)c(Cl)c1)Nc2nc3cc(ccc3c4cnccc24)C(O)=O" A1BZ6 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H](COCCCCNCc1ccc(c(c1)Cl)OC(F)(F)F)Nc2c3ccncc3c4ccc(cc4n2)C(=O)O" A1BZ6 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(COCCCCNCc1ccc(c(c1)Cl)OC(F)(F)F)Nc2c3ccncc3c4ccc(cc4n2)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZ6 "SYSTEMATIC NAME" ACDLabs 14.52 "5-({(2R)-1-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]propan-2-yl}amino)benzo[c][2,6]naphthyridine-8-carboxylic acid" A1BZ6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[[(2~{R})-1-[4-[[3-chloranyl-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]propan-2-yl]amino]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZ6 "Create component" 2025-03-12 RCSB A1BZ6 "Initial release" 2026-01-14 RCSB #