data_A1BZ7 # _chem_comp.id A1BZ7 _chem_comp.name "5-{(3S)-3-[3-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)propoxy]pyrrolidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H26 Cl F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 574.979 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZ7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZ7 C16 C1 C 0 1 N N N N N N 5.107 2.646 -9.136 -3.372 -1.180 -0.908 C16 A1BZ7 1 A1BZ7 C17 C2 C 0 1 N N N N N N 6.411 3.261 -12.511 0.189 -2.217 -0.739 C17 A1BZ7 2 A1BZ7 C22 C3 C 0 1 Y N N N N N 13.595 2.739 -13.607 6.886 -1.254 0.705 C22 A1BZ7 3 A1BZ7 C21 C4 C 0 1 Y N N N N N 12.405 2.060 -13.934 6.305 -1.236 -0.550 C21 A1BZ7 4 A1BZ7 C26 C5 C 0 1 Y N N N N N 12.429 0.997 -14.846 6.823 -0.424 -1.542 C26 A1BZ7 5 A1BZ7 C20 C6 C 0 1 N N N N N N 11.148 2.508 -13.244 5.106 -2.103 -0.836 C20 A1BZ7 6 A1BZ7 C19 C7 C 0 1 N N N N N N 8.791 2.468 -12.800 2.687 -2.174 -0.794 C19 A1BZ7 7 A1BZ7 C18 C8 C 0 1 N N N N N N 7.350 2.329 -13.317 1.430 -1.367 -0.461 C18 A1BZ7 8 A1BZ7 C13 C9 C 0 1 N N N N N N 3.132 1.705 -10.300 -4.183 -2.735 0.678 C13 A1BZ7 9 A1BZ7 C11 C10 C 0 1 Y N N N N N 5.800 -1.174 -5.390 -9.233 -1.377 0.799 C11 A1BZ7 10 A1BZ7 C12 C11 C 0 1 Y N N N N N 4.956 -1.036 -6.505 -8.007 -0.836 0.418 C12 A1BZ7 11 A1BZ7 C10 C12 C 0 1 Y N N N N N 6.224 1.132 -5.373 -8.377 -3.523 0.646 C10 A1BZ7 12 A1BZ7 C14 C13 C 0 1 N N N N N N 3.516 3.035 -10.976 -2.654 -2.910 0.626 C14 A1BZ7 13 A1BZ7 C8 C14 C 0 1 Y N N N N N 4.796 0.274 -7.091 -6.926 -1.708 0.146 C8 A1BZ7 14 A1BZ7 C7 C15 C 0 1 Y N N N N N 3.954 0.397 -8.283 -5.642 -1.132 -0.253 C7 A1BZ7 15 A1BZ7 C6 C16 C 0 1 Y N N N N N 2.602 -2.936 -8.725 -6.253 2.419 -0.246 C6 A1BZ7 16 A1BZ7 C5 C17 C 0 1 Y N N N N N 3.382 -1.897 -8.141 -6.487 1.044 -0.112 C5 A1BZ7 17 A1BZ7 C3 C18 C 0 1 Y N N N N N 4.324 -3.480 -6.538 -8.788 1.530 0.531 C3 A1BZ7 18 A1BZ7 C2 C19 C 0 1 Y N N N N N 3.575 -4.497 -7.104 -8.546 2.864 0.395 C2 A1BZ7 19 A1BZ7 C1 C20 C 0 1 Y N N N N N 2.712 -4.234 -8.218 -7.279 3.321 0.006 C1 A1BZ7 20 A1BZ7 F2 F1 F 0 1 N N N N N N 16.407 -0.857 -16.991 10.542 -0.228 1.829 F2 A1BZ7 21 A1BZ7 C27 C21 C 0 1 N N N N N N 16.705 -0.218 -15.876 10.128 1.080 1.559 C27 A1BZ7 22 A1BZ7 F F2 F 0 1 N N N N N N 18.009 0.023 -15.884 9.152 1.461 2.486 F A1BZ7 23 A1BZ7 F1 F3 F 0 1 N N N N N N 16.400 -1.074 -14.913 11.223 1.945 1.653 F1 A1BZ7 24 A1BZ7 O3 O1 O 0 1 N N N N N N 16.105 1.058 -15.740 9.582 1.145 0.240 O3 A1BZ7 25 A1BZ7 C24 C22 C 0 1 Y N N N N N 14.869 1.314 -15.098 8.504 0.359 -0.021 C24 A1BZ7 26 A1BZ7 C23 C23 C 0 1 Y N N N N N 14.828 2.386 -14.175 7.982 -0.457 0.972 C23 A1BZ7 27 A1BZ7 C25 C24 C 0 1 Y N N N N N 13.659 0.627 -15.418 7.923 0.372 -1.281 C25 A1BZ7 28 A1BZ7 CL CL1 CL 0 0 N N N N N N 13.621 -0.630 -16.510 8.572 1.391 -2.527 CL A1BZ7 29 A1BZ7 N3 N1 N 0 1 N N N N N N 9.836 2.060 -13.785 3.878 -1.358 -0.526 N3 A1BZ7 30 A1BZ7 O2 O2 O 0 1 N N N N N N 5.910 2.526 -11.394 -0.984 -1.463 -0.428 O2 A1BZ7 31 A1BZ7 C15 C25 C 0 1 N N S N N N 5.003 3.233 -10.576 -2.206 -2.169 -0.654 C15 A1BZ7 32 A1BZ7 N2 N2 N 0 1 N N N N N N 3.906 1.699 -9.008 -4.573 -1.964 -0.523 N2 A1BZ7 33 A1BZ7 N1 N3 N 0 1 Y N N N N N 6.443 -0.121 -4.846 -9.367 -2.684 0.899 N1 A1BZ7 34 A1BZ7 C9 C26 C 0 1 Y N N N N N 5.430 1.377 -6.471 -7.136 -3.083 0.272 C9 A1BZ7 35 A1BZ7 C4 C27 C 0 1 Y N N N N N 4.223 -2.164 -7.049 -7.772 0.604 0.282 C4 A1BZ7 36 A1BZ7 N N4 N 0 1 Y N N N N N 3.276 -0.636 -8.766 -5.497 0.167 -0.356 N A1BZ7 37 A1BZ7 C C28 C 0 1 N N N N N N 2.123 -5.339 -8.986 -7.032 4.770 -0.136 C A1BZ7 38 A1BZ7 O1 O3 O 0 1 N N N N N N 1.124 -5.243 -9.652 -5.936 5.170 -0.472 O1 A1BZ7 39 A1BZ7 O O4 O 0 1 N N N N N N 2.661 -6.492 -8.809 -8.024 5.649 0.108 O A1BZ7 40 A1BZ7 H1 H1 H 0 1 N N N N N N 6.050 2.094 -9.010 -3.271 -0.296 -0.277 H1 A1BZ7 41 A1BZ7 H2 H2 H 0 1 N N N N N N 5.049 3.448 -8.386 -3.417 -0.897 -1.959 H2 A1BZ7 42 A1BZ7 H3 H3 H 0 1 N N N N N N 6.971 4.140 -12.158 0.171 -2.499 -1.792 H3 A1BZ7 43 A1BZ7 H4 H4 H 0 1 N N N N N N 5.575 3.589 -13.147 0.218 -3.115 -0.123 H4 A1BZ7 44 A1BZ7 H5 H5 H 0 1 N N N N N N 13.557 3.554 -12.899 6.479 -1.889 1.479 H5 A1BZ7 45 A1BZ7 H6 H6 H 0 1 N N N N N N 11.521 0.472 -15.105 6.367 -0.412 -2.521 H6 A1BZ7 46 A1BZ7 H7 H7 H 0 1 N N N N N N 11.207 2.155 -12.204 5.105 -2.384 -1.889 H7 A1BZ7 47 A1BZ7 H8 H8 H 0 1 N N N N N N 11.145 3.608 -13.258 5.152 -3.001 -0.220 H8 A1BZ7 48 A1BZ7 H9 H9 H 0 1 N N N N N N 8.898 1.840 -11.903 2.715 -3.073 -0.178 H9 A1BZ7 49 A1BZ7 H10 H10 H 0 1 N N N N N N 8.962 3.521 -12.532 2.668 -2.456 -1.847 H10 A1BZ7 50 A1BZ7 H11 H11 H 0 1 N N N N N N 7.315 2.607 -14.381 1.401 -0.468 -1.077 H11 A1BZ7 51 A1BZ7 H12 H12 H 0 1 N N N N N N 7.019 1.287 -13.199 1.449 -1.085 0.592 H12 A1BZ7 52 A1BZ7 H13 H13 H 0 1 N N N N N N 2.050 1.667 -10.105 -4.670 -3.710 0.667 H13 A1BZ7 53 A1BZ7 H14 H14 H 0 1 N N N N N N 3.421 0.851 -10.930 -4.467 -2.188 1.577 H14 A1BZ7 54 A1BZ7 H15 H15 H 0 1 N N N N N N 5.938 -2.153 -4.956 -10.068 -0.728 1.015 H15 A1BZ7 55 A1BZ7 H16 H16 H 0 1 N N N N N N 6.704 1.974 -4.896 -8.550 -4.584 0.746 H16 A1BZ7 56 A1BZ7 H17 H17 H 0 1 N N N N N N 2.895 3.861 -10.599 -2.192 -2.461 1.505 H17 A1BZ7 57 A1BZ7 H18 H18 H 0 1 N N N N N N 3.409 2.965 -12.069 -2.397 -3.968 0.561 H18 A1BZ7 58 A1BZ7 H19 H19 H 0 1 N N N N N N 1.935 -2.724 -9.548 -5.279 2.777 -0.546 H19 A1BZ7 59 A1BZ7 H20 H20 H 0 1 N N N N N N 4.984 -3.690 -5.709 -9.767 1.188 0.831 H20 A1BZ7 60 A1BZ7 H21 H21 H 0 1 N N N N N N 3.641 -5.498 -6.703 -9.336 3.575 0.589 H21 A1BZ7 61 A1BZ7 H22 H22 H 0 1 N N N N N N 15.728 2.922 -13.913 8.433 -0.469 1.954 H22 A1BZ7 62 A1BZ7 H23 H23 H 0 1 N N N N N N 9.663 2.495 -14.669 3.885 -1.031 0.428 H23 A1BZ7 63 A1BZ7 H25 H25 H 0 1 N N N N N N 5.236 4.308 -10.550 -2.102 -2.864 -1.487 H25 A1BZ7 64 A1BZ7 H26 H26 H 0 1 N N N N N N 5.295 2.380 -6.848 -6.339 -3.784 0.074 H26 A1BZ7 65 A1BZ7 H27 H27 H 0 1 N N N N N N 2.153 -7.152 -9.265 -7.815 6.587 0.002 H27 A1BZ7 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZ7 F2 C27 SING N N 1 A1BZ7 CL C25 SING N N 2 A1BZ7 F C27 SING N N 3 A1BZ7 C27 O3 SING N N 4 A1BZ7 C27 F1 SING N N 5 A1BZ7 O3 C24 SING N N 6 A1BZ7 C25 C24 DOUB Y N 7 A1BZ7 C25 C26 SING Y N 8 A1BZ7 C24 C23 SING Y N 9 A1BZ7 C26 C21 DOUB Y N 10 A1BZ7 C23 C22 DOUB Y N 11 A1BZ7 C21 C22 SING Y N 12 A1BZ7 C21 C20 SING N N 13 A1BZ7 N3 C20 SING N N 14 A1BZ7 N3 C19 SING N N 15 A1BZ7 C18 C19 SING N N 16 A1BZ7 C18 C17 SING N N 17 A1BZ7 C17 O2 SING N N 18 A1BZ7 O2 C15 SING N N 19 A1BZ7 C14 C15 SING N N 20 A1BZ7 C14 C13 SING N N 21 A1BZ7 C15 C16 SING N N 22 A1BZ7 C13 N2 SING N N 23 A1BZ7 O1 C DOUB N N 24 A1BZ7 C16 N2 SING N N 25 A1BZ7 N2 C7 SING N N 26 A1BZ7 C O SING N N 27 A1BZ7 C C1 SING N N 28 A1BZ7 N C7 DOUB Y N 29 A1BZ7 N C5 SING Y N 30 A1BZ7 C6 C1 DOUB Y N 31 A1BZ7 C6 C5 SING Y N 32 A1BZ7 C7 C8 SING Y N 33 A1BZ7 C1 C2 SING Y N 34 A1BZ7 C5 C4 DOUB Y N 35 A1BZ7 C2 C3 DOUB Y N 36 A1BZ7 C8 C12 DOUB Y N 37 A1BZ7 C8 C9 SING Y N 38 A1BZ7 C4 C3 SING Y N 39 A1BZ7 C4 C12 SING Y N 40 A1BZ7 C12 C11 SING Y N 41 A1BZ7 C9 C10 DOUB Y N 42 A1BZ7 C11 N1 DOUB Y N 43 A1BZ7 C10 N1 SING Y N 44 A1BZ7 C16 H1 SING N N 45 A1BZ7 C16 H2 SING N N 46 A1BZ7 C17 H3 SING N N 47 A1BZ7 C17 H4 SING N N 48 A1BZ7 C22 H5 SING N N 49 A1BZ7 C26 H6 SING N N 50 A1BZ7 C20 H7 SING N N 51 A1BZ7 C20 H8 SING N N 52 A1BZ7 C19 H9 SING N N 53 A1BZ7 C19 H10 SING N N 54 A1BZ7 C18 H11 SING N N 55 A1BZ7 C18 H12 SING N N 56 A1BZ7 C13 H13 SING N N 57 A1BZ7 C13 H14 SING N N 58 A1BZ7 C11 H15 SING N N 59 A1BZ7 C10 H16 SING N N 60 A1BZ7 C14 H17 SING N N 61 A1BZ7 C14 H18 SING N N 62 A1BZ7 C6 H19 SING N N 63 A1BZ7 C3 H20 SING N N 64 A1BZ7 C2 H21 SING N N 65 A1BZ7 C23 H22 SING N N 66 A1BZ7 N3 H23 SING N N 67 A1BZ7 C15 H25 SING N N 68 A1BZ7 C9 H26 SING N N 69 A1BZ7 O H27 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZ7 SMILES ACDLabs 14.52 "FC(F)(F)Oc1ccc(cc1Cl)CNCCCOC1CCN(C1)c1nc2cc(ccc2c2cnccc12)C(=O)O" A1BZ7 InChI InChI 1.06 "InChI=1S/C28H26ClF3N4O4/c29-23-12-17(2-5-25(23)40-28(30,31)32)14-33-8-1-11-39-19-7-10-36(16-19)26-21-6-9-34-15-22(21)20-4-3-18(27(37)38)13-24(20)35-26/h2-6,9,12-13,15,19,33H,1,7-8,10-11,14,16H2,(H,37,38)/t19-/m0/s1" A1BZ7 InChIKey InChI 1.06 JNMXVLNAQSLQFN-IBGZPJMESA-N A1BZ7 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(N3CC[C@@H](C3)OCCCNCc4ccc(OC(F)(F)F)c(Cl)c4)c5ccncc25" A1BZ7 SMILES CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(N3CC[CH](C3)OCCCNCc4ccc(OC(F)(F)F)c(Cl)c4)c5ccncc25" A1BZ7 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCO[C@H]2CCN(C2)c3c4ccncc4c5ccc(cc5n3)C(=O)O)Cl)OC(F)(F)F" A1BZ7 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCOC2CCN(C2)c3c4ccncc4c5ccc(cc5n3)C(=O)O)Cl)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZ7 "SYSTEMATIC NAME" ACDLabs 14.52 "5-{(3S)-3-[3-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)propoxy]pyrrolidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid" A1BZ7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[(3~{S})-3-[3-[[3-chloranyl-4-(trifluoromethyloxy)phenyl]methylamino]propoxy]pyrrolidin-1-yl]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZ7 "Create component" 2025-03-12 RCSB A1BZ7 "Initial release" 2026-01-14 RCSB #