data_A1BZ9 # _chem_comp.id A1BZ9 _chem_comp.name "5-{3-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]azetidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H26 Cl F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 574.979 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZ9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZ9 C1 C1 C 0 1 Y N N N N N -5.393 -0.956 16.425 -9.830 1.885 -0.356 C1 A1BZ9 1 A1BZ9 C2 C2 C 0 1 Y N N N N N -5.704 -0.839 17.753 -10.540 0.692 -0.560 C2 A1BZ9 2 A1BZ9 C3 C3 C 0 1 Y N N N N N -5.893 0.369 18.298 -9.903 -0.510 -0.493 C3 A1BZ9 3 A1BZ9 C4 C4 C 0 1 Y N N N N N -5.762 1.487 17.551 -8.534 -0.566 -0.221 C4 A1BZ9 4 A1BZ9 C5 C5 C 0 1 Y N N N N N -5.454 1.351 16.243 -7.801 0.625 -0.013 C5 A1BZ9 5 A1BZ9 C6 C6 C 0 1 Y N N N N N -5.292 0.118 15.690 -8.469 1.854 -0.084 C6 A1BZ9 6 A1BZ9 C7 C7 C 0 1 Y N N N N N -5.395 3.613 15.852 -5.790 -0.519 0.334 C7 A1BZ9 7 A1BZ9 N1 N1 N 0 1 Y N N N N N -6.351 4.330 19.861 -7.745 -4.187 -0.242 N1 A1BZ9 8 A1BZ9 O1 O1 O 0 1 N N N N N N -4.828 -3.221 16.493 -11.853 3.215 -0.706 O1 A1BZ9 9 A1BZ9 C8 C8 C 0 1 Y N N N N N -5.710 3.898 17.199 -6.439 -1.815 0.138 C8 A1BZ9 10 A1BZ9 C9 C9 C 0 1 Y N N N N N -5.835 5.173 17.692 -5.751 -3.028 0.217 C9 A1BZ9 11 A1BZ9 C10 C10 C 0 1 Y N N N N N -6.150 5.343 19.002 -6.449 -4.189 0.019 C10 A1BZ9 12 A1BZ9 C11 C11 C 0 1 Y N N N N N -6.223 3.110 19.382 -8.449 -3.078 -0.330 C11 A1BZ9 13 A1BZ9 C12 C12 C 0 1 Y N N N N N -5.900 2.815 18.048 -7.826 -1.847 -0.143 C12 A1BZ9 14 A1BZ9 C13 C13 C 0 1 N N N N N N -4.570 4.542 13.719 -3.985 0.935 0.770 C13 A1BZ9 15 A1BZ9 C14 C14 C 0 1 N N N N N N -3.483 5.345 14.401 -2.756 0.525 -0.061 C14 A1BZ9 16 A1BZ9 C15 C15 C 0 1 N N N N N N -4.583 5.957 15.253 -3.638 -0.601 -0.629 C15 A1BZ9 17 A1BZ9 O2 O2 O 0 1 N N N N N N -2.693 6.250 13.744 -1.660 0.055 0.727 O2 A1BZ9 18 A1BZ9 N2 N2 N 0 1 N N N N N N -5.312 4.686 14.975 -4.437 -0.464 0.609 N2 A1BZ9 19 A1BZ9 C16 C16 C 0 1 N N N N N N -1.635 6.431 14.594 -0.378 0.307 0.148 C16 A1BZ9 20 A1BZ9 C17 C17 C 0 1 N N N N N N -0.289 6.212 13.903 0.714 -0.236 1.072 C17 A1BZ9 21 A1BZ9 O3 O3 O 0 1 N N N N N N 9.094 6.254 18.213 10.559 0.303 -0.754 O3 A1BZ9 22 A1BZ9 C18 C18 C 0 1 N N N N N N 0.768 5.940 14.950 2.087 0.034 0.452 C18 A1BZ9 23 A1BZ9 C19 C19 C 0 1 N N N N N N 1.935 6.853 14.944 3.179 -0.509 1.376 C19 A1BZ9 24 A1BZ9 C20 C20 C 0 1 N N N N N N 4.282 6.908 15.399 5.573 -0.758 1.643 C20 A1BZ9 25 A1BZ9 C21 C21 C 0 1 Y N N N N N 5.479 6.703 16.307 6.907 -0.475 1.002 C21 A1BZ9 26 A1BZ9 C22 C22 C 0 1 Y N N N N N 5.927 7.703 17.122 7.565 0.711 1.272 C22 A1BZ9 27 A1BZ9 C23 C23 C 0 1 Y N N N N N 7.106 7.587 17.808 8.788 0.974 0.686 C23 A1BZ9 28 A1BZ9 C24 C24 C 0 1 Y N N N N N 7.843 6.452 17.656 9.356 0.047 -0.176 C24 A1BZ9 29 A1BZ9 F1 F1 F 0 1 N N N N N N 8.784 6.548 20.234 12.403 1.648 -1.108 F1 A1BZ9 30 A1BZ9 F2 F2 F 0 1 N N N N N N 10.333 5.512 19.835 10.347 2.602 -0.816 F2 A1BZ9 31 A1BZ9 C25 C25 C 0 1 Y N N N N N 7.370 5.508 16.862 8.694 -1.143 -0.446 C25 A1BZ9 32 A1BZ9 C26 C26 C 0 1 Y N N N N N 6.210 5.606 16.212 7.473 -1.403 0.148 C26 A1BZ9 33 A1BZ9 N3 N3 N 0 1 N N N N N N 3.009 6.317 15.748 4.497 -0.250 0.781 N3 A1BZ9 34 A1BZ9 C27 C27 C 0 1 N N N N N N 9.217 5.765 19.429 11.182 1.548 -0.431 C27 A1BZ9 35 A1BZ9 F F3 F 0 1 N N N N N N 8.614 4.756 19.503 11.407 1.612 0.948 F A1BZ9 36 A1BZ9 CL CL1 CL 0 0 N N N N N N 8.324 4.208 16.605 9.401 -2.306 -1.524 CL A1BZ9 37 A1BZ9 N N4 N 0 1 Y N N N N N -5.260 2.421 15.393 -6.482 0.592 0.250 N A1BZ9 38 A1BZ9 C C28 C 0 1 N N N N N N -5.135 -2.303 15.866 -10.534 3.181 -0.437 C A1BZ9 39 A1BZ9 O O4 O 0 1 N N N N N N -5.261 -2.501 14.576 -9.923 4.216 -0.261 O A1BZ9 40 A1BZ9 H1 H1 H 0 1 N N N N N N -5.797 -1.725 18.364 -11.599 0.728 -0.771 H1 A1BZ9 41 A1BZ9 H2 H2 H 0 1 N N N N N N -6.152 0.450 19.343 -10.458 -1.423 -0.651 H2 A1BZ9 42 A1BZ9 H3 H3 H 0 1 N N N N N N -5.078 0.028 14.635 -7.927 2.776 0.071 H3 A1BZ9 43 A1BZ9 H4 H4 H 0 1 N N N N N N -4.723 -3.974 15.923 -12.270 4.087 -0.749 H4 A1BZ9 44 A1BZ9 H5 H5 H 0 1 N N N N N N -5.685 6.027 17.048 -4.692 -3.049 0.429 H5 A1BZ9 45 A1BZ9 H6 H6 H 0 1 N N N N N N -6.244 6.352 19.375 -5.926 -5.133 0.078 H6 A1BZ9 46 A1BZ9 H7 H7 H 0 1 N N N N N N -6.376 2.283 20.059 -9.507 -3.123 -0.546 H7 A1BZ9 47 A1BZ9 H8 H8 H 0 1 N N N N N N -5.031 5.029 12.847 -3.749 1.205 1.799 H8 A1BZ9 48 A1BZ9 H9 H9 H 0 1 N N N N N N -4.292 3.510 13.458 -4.627 1.664 0.274 H9 A1BZ9 49 A1BZ9 H10 H10 H 0 1 N N N N N N -2.879 4.672 15.027 -2.460 1.267 -0.803 H10 A1BZ9 50 A1BZ9 H11 H11 H 0 1 N N N N N N -4.321 6.127 16.308 -4.179 -0.322 -1.533 H11 A1BZ9 51 A1BZ9 H12 H12 H 0 1 N N N N N N -5.047 6.865 14.840 -3.125 -1.559 -0.719 H12 A1BZ9 52 A1BZ9 H13 H13 H 0 1 N N N N N N -1.668 7.458 14.986 -0.313 -0.188 -0.821 H13 A1BZ9 53 A1BZ9 H14 H14 H 0 1 N N N N N N -1.725 5.718 15.427 -0.243 1.380 0.018 H14 A1BZ9 54 A1BZ9 H15 H15 H 0 1 N N N N N N -0.361 5.352 13.221 0.649 0.259 2.041 H15 A1BZ9 55 A1BZ9 H16 H16 H 0 1 N N N N N N -0.018 7.112 13.331 0.579 -1.310 1.203 H16 A1BZ9 56 A1BZ9 H17 H17 H 0 1 N N N N N N 0.290 6.011 15.938 2.152 -0.461 -0.517 H17 A1BZ9 57 A1BZ9 H18 H18 H 0 1 N N N N N N 1.140 4.916 14.795 2.222 1.108 0.322 H18 A1BZ9 58 A1BZ9 H19 H19 H 0 1 N N N N N N 2.288 6.981 13.910 3.114 -0.014 2.345 H19 A1BZ9 59 A1BZ9 H20 H20 H 0 1 N N N N N N 1.632 7.829 15.351 3.044 -1.582 1.507 H20 A1BZ9 60 A1BZ9 H21 H21 H 0 1 N N N N N N 4.559 6.510 14.412 5.454 -1.834 1.775 H21 A1BZ9 61 A1BZ9 H22 H22 H 0 1 N N N N N N 4.120 7.993 15.325 5.524 -0.265 2.614 H22 A1BZ9 62 A1BZ9 H23 H23 H 0 1 N N N N N N 5.340 8.603 17.227 7.122 1.433 1.942 H23 A1BZ9 63 A1BZ9 H24 H24 H 0 1 N N N N N N 7.445 8.381 18.457 9.300 1.900 0.897 H24 A1BZ9 64 A1BZ9 H25 H25 H 0 1 N N N N N N 5.865 4.783 15.603 6.959 -2.331 -0.058 H25 A1BZ9 65 A1BZ9 H26 H26 H 0 1 N N N N N N 2.818 6.504 16.711 4.559 -0.644 -0.145 H26 A1BZ9 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZ9 C13 C14 SING N N 1 A1BZ9 C13 N2 SING N N 2 A1BZ9 O2 C14 SING N N 3 A1BZ9 O2 C16 SING N N 4 A1BZ9 C17 C16 SING N N 5 A1BZ9 C17 C18 SING N N 6 A1BZ9 C14 C15 SING N N 7 A1BZ9 O C DOUB N N 8 A1BZ9 C19 C18 SING N N 9 A1BZ9 C19 N3 SING N N 10 A1BZ9 N2 C15 SING N N 11 A1BZ9 N2 C7 SING N N 12 A1BZ9 N C7 DOUB Y N 13 A1BZ9 N C5 SING Y N 14 A1BZ9 C20 N3 SING N N 15 A1BZ9 C20 C21 SING N N 16 A1BZ9 C6 C5 DOUB Y N 17 A1BZ9 C6 C1 SING Y N 18 A1BZ9 C7 C8 SING Y N 19 A1BZ9 C C1 SING N N 20 A1BZ9 C O1 SING N N 21 A1BZ9 C26 C21 DOUB Y N 22 A1BZ9 C26 C25 SING Y N 23 A1BZ9 C5 C4 SING Y N 24 A1BZ9 C21 C22 SING Y N 25 A1BZ9 C1 C2 DOUB Y N 26 A1BZ9 CL C25 SING N N 27 A1BZ9 C25 C24 DOUB Y N 28 A1BZ9 C22 C23 DOUB Y N 29 A1BZ9 C8 C9 DOUB Y N 30 A1BZ9 C8 C12 SING Y N 31 A1BZ9 C4 C12 SING Y N 32 A1BZ9 C4 C3 DOUB Y N 33 A1BZ9 C24 C23 SING Y N 34 A1BZ9 C24 O3 SING N N 35 A1BZ9 C9 C10 SING Y N 36 A1BZ9 C2 C3 SING Y N 37 A1BZ9 C12 C11 DOUB Y N 38 A1BZ9 O3 C27 SING N N 39 A1BZ9 C10 N1 DOUB Y N 40 A1BZ9 C11 N1 SING Y N 41 A1BZ9 C27 F SING N N 42 A1BZ9 C27 F2 SING N N 43 A1BZ9 C27 F1 SING N N 44 A1BZ9 C2 H1 SING N N 45 A1BZ9 C3 H2 SING N N 46 A1BZ9 C6 H3 SING N N 47 A1BZ9 O1 H4 SING N N 48 A1BZ9 C9 H5 SING N N 49 A1BZ9 C10 H6 SING N N 50 A1BZ9 C11 H7 SING N N 51 A1BZ9 C13 H8 SING N N 52 A1BZ9 C13 H9 SING N N 53 A1BZ9 C14 H10 SING N N 54 A1BZ9 C15 H11 SING N N 55 A1BZ9 C15 H12 SING N N 56 A1BZ9 C16 H13 SING N N 57 A1BZ9 C16 H14 SING N N 58 A1BZ9 C17 H15 SING N N 59 A1BZ9 C17 H16 SING N N 60 A1BZ9 C18 H17 SING N N 61 A1BZ9 C18 H18 SING N N 62 A1BZ9 C19 H19 SING N N 63 A1BZ9 C19 H20 SING N N 64 A1BZ9 C20 H21 SING N N 65 A1BZ9 C20 H22 SING N N 66 A1BZ9 C22 H23 SING N N 67 A1BZ9 C23 H24 SING N N 68 A1BZ9 C26 H25 SING N N 69 A1BZ9 N3 H26 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZ9 SMILES ACDLabs 14.52 "FC(F)(F)Oc1ccc(cc1Cl)CNCCCCOC1CN(C1)c1nc2cc(ccc2c2cnccc12)C(=O)O" A1BZ9 InChI InChI 1.06 "InChI=1S/C28H26ClF3N4O4/c29-23-11-17(3-6-25(23)40-28(30,31)32)13-33-8-1-2-10-39-19-15-36(16-19)26-21-7-9-34-14-22(21)20-5-4-18(27(37)38)12-24(20)35-26/h3-7,9,11-12,14,19,33H,1-2,8,10,13,15-16H2,(H,37,38)" A1BZ9 InChIKey InChI 1.06 KHQBJGWNPXLJQL-UHFFFAOYSA-N A1BZ9 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(N3CC(C3)OCCCCNCc4ccc(OC(F)(F)F)c(Cl)c4)c5ccncc25" A1BZ9 SMILES CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(N3CC(C3)OCCCCNCc4ccc(OC(F)(F)F)c(Cl)c4)c5ccncc25" A1BZ9 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOC2CN(C2)c3c4ccncc4c5ccc(cc5n3)C(=O)O)Cl)OC(F)(F)F" A1BZ9 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOC2CN(C2)c3c4ccncc4c5ccc(cc5n3)C(=O)O)Cl)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZ9 "SYSTEMATIC NAME" ACDLabs 14.52 "5-{3-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]azetidin-1-yl}benzo[c][2,6]naphthyridine-8-carboxylic acid" A1BZ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[3-[4-[[3-chloranyl-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]azetidin-1-yl]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZ9 "Create component" 2025-03-12 RCSB A1BZ9 "Initial release" 2026-01-14 RCSB #