data_A1BZM # _chem_comp.id A1BZM _chem_comp.name "5-[(4-hydroxy-3-methoxyphenyl)methyl]-1,3-diazinane-2,4,6-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H12 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-10 _chem_comp.pdbx_modified_date 2025-10-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 264.234 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9N6O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZM C02 C1 C 0 1 N N N N N N 9.403 18.499 -40.072 2.909 -1.219 -0.186 C02 A1BZM 1 A1BZM C04 C2 C 0 1 N N N N N N 7.197 19.735 -39.450 3.518 1.018 0.198 C04 A1BZM 2 A1BZM C07 C3 C 0 1 N N N N N N 9.435 20.788 -38.714 1.255 0.570 0.650 C07 A1BZM 3 A1BZM C09 C4 C 0 1 N N N N N N 10.177 19.652 -39.448 1.497 -0.872 0.246 C09 A1BZM 4 A1BZM C10 C5 C 0 1 N N N N N N 11.516 19.374 -38.731 0.550 -1.208 -0.908 C10 A1BZM 5 A1BZM N03 N1 N 0 1 N N N N N N 7.950 18.659 -40.093 3.826 -0.229 -0.176 N03 A1BZM 6 A1BZM N06 N2 N 0 1 N N N N N N 7.978 20.761 -38.789 2.304 1.418 0.594 N06 A1BZM 7 A1BZM O01 O1 O 0 1 N N N N N N 9.949 17.617 -40.649 3.204 -2.346 -0.523 O01 A1BZM 8 A1BZM O05 O2 O 0 1 N N N N N N 6.004 19.759 -39.482 4.405 1.848 0.178 O05 A1BZM 9 A1BZM O08 O3 O 0 1 N N N N N N 9.998 21.680 -38.144 0.161 0.947 1.011 O08 A1BZM 10 A1BZM H091 H1 H 0 0 N N N N N N 10.529 20.180 -40.347 1.235 -1.507 1.092 H091 A1BZM 11 A1BZM H1 H2 H 0 1 N N N N N N 12.143 18.698 -39.331 0.770 -0.563 -1.758 H1 A1BZM 12 A1BZM H101 H3 H 0 0 N N N N N N 12.059 20.313 -38.548 0.685 -2.250 -1.197 H101 A1BZM 13 A1BZM H031 H5 H 0 0 N N N N N N 7.424 17.971 -40.592 4.736 -0.427 -0.449 H031 A1BZM 14 A1BZM H061 H6 H 0 0 N N N N N N 7.480 21.509 -38.350 2.174 2.345 0.849 H061 A1BZM 15 A1BZM C1 C6 C 0 1 Y N N N N N ? ? ? -0.875 -0.990 -0.468 C1 A1BZM 16 A1BZM C2 C7 C 0 1 Y N N N N N ? ? ? -1.470 0.246 -0.644 C2 A1BZM 17 A1BZM C3 C8 C 0 1 Y N N N N N ? ? ? -2.780 0.448 -0.241 C3 A1BZM 18 A1BZM C4 C9 C 0 1 Y N N N N N ? ? ? -3.494 -0.595 0.342 C4 A1BZM 19 A1BZM C5 C10 C 0 1 Y N N N N N ? ? ? -2.892 -1.830 0.516 C5 A1BZM 20 A1BZM C6 C11 C 0 1 Y N N N N N ? ? ? -1.586 -2.027 0.106 C6 A1BZM 21 A1BZM O1 O4 O 0 1 N N N N N N ? ? ? -3.366 1.663 -0.413 O1 A1BZM 22 A1BZM C8 C12 C 0 1 N N N N N N ? ? ? -2.573 2.686 -1.018 C8 A1BZM 23 A1BZM O2 O5 O 0 1 N N N N N N ? ? ? -4.780 -0.401 0.740 O2 A1BZM 24 A1BZM H2 H12 H 0 1 N N N N N N ? ? ? -0.914 1.054 -1.097 H2 A1BZM 25 A1BZM H3 H7 H 0 1 N N N N N N ? ? ? -3.444 -2.641 0.968 H3 A1BZM 26 A1BZM H4 H4 H 0 1 N N N N N N ? ? ? -1.118 -2.990 0.242 H4 A1BZM 27 A1BZM H5 H9 H 0 1 N N N N N N ? ? ? -3.160 3.602 -1.096 H5 A1BZM 28 A1BZM H6 H10 H 0 1 N N N N N N ? ? ? -1.691 2.871 -0.405 H6 A1BZM 29 A1BZM H7 H11 H 0 1 N N N N N N ? ? ? -2.264 2.366 -2.013 H7 A1BZM 30 A1BZM H8 H8 H 0 1 N N N N N N ? ? ? -5.437 -0.596 0.058 H8 A1BZM 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZM O01 C02 DOUB N N 1 A1BZM N03 C02 SING N N 2 A1BZM N03 C04 SING N N 3 A1BZM C02 C09 SING N N 4 A1BZM O05 C04 DOUB N N 5 A1BZM C04 N06 SING N N 6 A1BZM C09 C10 SING N N 7 A1BZM C09 C07 SING N N 8 A1BZM N06 C07 SING N N 9 A1BZM C07 O08 DOUB N N 10 A1BZM C09 H091 SING N N 11 A1BZM C10 H1 SING N N 12 A1BZM C10 H101 SING N N 13 A1BZM N03 H031 SING N N 14 A1BZM N06 H061 SING N N 15 A1BZM C10 C1 SING N N 16 A1BZM C1 C2 SING Y N 17 A1BZM C2 C3 DOUB Y N 18 A1BZM C3 C4 SING Y N 19 A1BZM C4 C5 DOUB Y N 20 A1BZM C5 C6 SING Y N 21 A1BZM C6 C1 DOUB Y N 22 A1BZM C3 O1 SING N N 23 A1BZM O1 C8 SING N N 24 A1BZM C4 O2 SING N N 25 A1BZM C2 H2 SING N N 26 A1BZM C5 H3 SING N N 27 A1BZM C6 H4 SING N N 28 A1BZM C8 H5 SING N N 29 A1BZM C8 H6 SING N N 30 A1BZM C8 H7 SING N N 31 A1BZM O2 H8 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZM SMILES ACDLabs 14.52 "O=C1NC(=O)NC(=O)C1Cc1ccc(O)c(OC)c1" A1BZM InChI InChI 1.06 "InChI=1S/C12H12N2O5/c1-19-9-5-6(2-3-8(9)15)4-7-10(16)13-12(18)14-11(7)17/h2-3,5,7,15H,4H2,1H3,(H2,13,14,16,17,18)" A1BZM InChIKey InChI 1.06 NMORDWBHFQWWLA-UHFFFAOYSA-N A1BZM SMILES_CANONICAL CACTVS 3.385 "COc1cc(CC2C(=O)NC(=O)NC2=O)ccc1O" A1BZM SMILES CACTVS 3.385 "COc1cc(CC2C(=O)NC(=O)NC2=O)ccc1O" A1BZM SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "COc1cc(ccc1O)CC2C(=O)NC(=O)NC2=O" A1BZM SMILES "OpenEye OEToolkits" 3.1.0.0 "COc1cc(ccc1O)CC2C(=O)NC(=O)NC2=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZM "SYSTEMATIC NAME" ACDLabs 14.52 "5-[(4-hydroxy-3-methoxyphenyl)methyl]-1,3-diazinane-2,4,6-trione" A1BZM "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[(3-methoxy-4-oxidanyl-phenyl)methyl]-1,3-diazinane-2,4,6-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZM "Create component" 2025-03-10 RCSB A1BZM "Modify PCM" 2025-03-10 RCSB A1BZM "Initial release" 2025-07-23 RCSB A1BZM "Modify component atom id" 2025-10-01 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1BZM _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C10 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #