data_A1BZS # _chem_comp.id A1BZS _chem_comp.name "5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H33 Cl N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 553.097 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BZS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I7Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BZS C1 C1 C 0 1 Y N N N N N -5.210 -0.993 16.120 -9.642 -2.166 0.070 C1 A1BZS 1 A1BZS C2 C2 C 0 1 Y N N N N N -5.421 -0.816 17.483 -10.651 -1.194 0.082 C2 A1BZS 2 A1BZS C3 C3 C 0 1 Y N N N N N -5.583 0.431 18.008 -10.333 0.132 0.062 C3 A1BZS 3 A1BZS C4 C4 C 0 1 Y N N N N N -5.517 1.584 17.198 -8.996 0.532 0.028 C4 A1BZS 4 A1BZS C5 C5 C 0 1 Y N N N N N -5.285 1.409 15.821 -7.963 -0.434 0.016 C5 A1BZS 5 A1BZS C6 C6 C 0 1 Y N N N N N -5.160 0.104 15.296 -8.306 -1.793 0.038 C6 A1BZS 6 A1BZS C7 C7 C 0 1 Y N N N N N -5.279 3.706 15.400 -6.273 1.182 -0.039 C7 A1BZS 7 A1BZS C14 C8 C 0 1 N N N N N N 4.266 7.236 16.386 5.599 -1.917 -0.275 C14 A1BZS 8 A1BZS C15 C9 C 0 1 Y N N N N N 5.722 6.898 16.598 6.990 -1.337 -0.313 C15 A1BZS 9 A1BZS C16 C10 C 0 1 Y N N N N N 6.712 7.857 16.410 7.595 -1.080 -1.530 C16 A1BZS 10 A1BZS C8 C11 C 0 1 N N N N N N -4.646 4.626 13.119 -3.940 0.386 -0.083 C8 A1BZS 11 A1BZS CL CL1 CL 0 0 N N N N N N 7.907 3.732 17.638 9.760 -0.182 2.322 CL A1BZS 12 A1BZS C19 C12 C 0 1 Y N N N N N 7.436 5.368 17.320 8.927 -0.526 0.839 C19 A1BZS 13 A1BZS C18 C13 C 0 1 Y N N N N N 8.420 6.340 17.208 9.544 -0.270 -0.385 C18 A1BZS 14 A1BZS C21 C14 C 0 1 Y N N N N N 9.830 6.076 17.605 10.915 0.297 -0.424 C21 A1BZS 15 A1BZS C26 C15 C 0 1 Y N N N N N 10.767 5.627 16.669 11.229 1.420 0.337 C26 A1BZS 16 A1BZS C25 C16 C 0 1 Y N N N N N 12.075 5.358 17.049 12.506 1.943 0.298 C25 A1BZS 17 A1BZS C24 C17 C 0 1 Y N N N N N 12.468 5.529 18.368 13.473 1.353 -0.496 C24 A1BZS 18 A1BZS C23 C18 C 0 1 Y N N N N N 11.550 5.966 19.308 13.166 0.237 -1.255 C23 A1BZS 19 A1BZS C22 C19 C 0 1 Y N N N N N 10.243 6.244 18.932 11.894 -0.297 -1.218 C22 A1BZS 20 A1BZS C17 C20 C 0 1 Y N N N N N 8.037 7.593 16.725 8.868 -0.548 -1.572 C17 A1BZS 21 A1BZS C20 C21 C 0 1 Y N N N N N 6.106 5.639 17.053 7.653 -1.058 0.868 C20 A1BZS 22 A1BZS N4 N1 N 0 1 N N N N N N 3.576 6.360 15.427 4.614 -0.828 -0.265 N4 A1BZS 23 A1BZS C13 C22 C 0 1 N N N N N N 2.163 6.727 15.256 3.244 -1.357 -0.228 C13 A1BZS 24 A1BZS C12 C23 C 0 1 N N N N N N 1.367 5.685 14.516 2.249 -0.196 -0.218 C12 A1BZS 25 A1BZS C11 C24 C 0 1 N N N N N N -0.040 6.185 14.159 0.822 -0.747 -0.179 C11 A1BZS 26 A1BZS C10 C25 C 0 1 N N N N N N -0.931 5.026 13.750 -0.174 0.415 -0.169 C10 A1BZS 27 A1BZS N3 N2 N 0 1 N N N N N N -2.331 5.420 13.544 -1.543 -0.115 -0.132 N3 A1BZS 28 A1BZS C9 C26 C 0 1 N N N N N N -3.156 4.313 13.037 -2.529 0.975 -0.122 C9 A1BZS 29 A1BZS N2 N3 N 0 1 N N N N N N -5.062 4.792 14.500 -4.923 1.472 -0.073 N2 A1BZS 30 A1BZS C27 C27 C 0 1 Y N N N N N -5.594 4.006 16.777 -7.249 2.272 -0.029 C27 A1BZS 31 A1BZS C31 C28 C 0 1 Y N N N N N -5.670 2.918 17.682 -8.627 1.951 0.005 C31 A1BZS 32 A1BZS C30 C29 C 0 1 Y N N N N N -5.914 3.233 19.036 -9.561 2.983 0.014 C30 A1BZS 33 A1BZS N5 N4 N 0 1 Y N N N N N -6.102 4.474 19.496 -9.152 4.235 -0.009 N5 A1BZS 34 A1BZS C29 C30 C 0 1 Y N N N N N -6.079 5.476 18.605 -7.872 4.565 -0.041 C29 A1BZS 35 A1BZS C28 C31 C 0 1 Y N N N N N -5.838 5.311 17.279 -6.883 3.619 -0.052 C28 A1BZS 36 A1BZS N1 N5 N 0 1 Y N N N N N -5.159 2.461 14.943 -6.669 -0.068 -0.016 N1 A1BZS 37 A1BZS C C32 C 0 1 N N N N N N -4.954 -2.376 15.601 -10.003 -3.599 0.099 C A1BZS 38 A1BZS O O1 O 0 1 N N N N N N -4.375 -3.205 16.336 -9.131 -4.446 0.089 O A1BZS 39 A1BZS N N6 N 0 1 N N N N N N -5.287 -2.648 14.348 -11.299 -3.967 0.136 N A1BZS 40 A1BZS H1 H1 H 0 1 N N N N N N -5.457 -1.677 18.133 -11.688 -1.496 0.107 H1 A1BZS 41 A1BZS H2 H2 H 0 1 N N N N N N -5.766 0.539 19.067 -11.117 0.874 0.071 H2 A1BZS 42 A1BZS H3 H3 H 0 1 N N N N N N -5.023 -0.033 14.233 -7.532 -2.546 0.029 H3 A1BZS 43 A1BZS H4 H4 H 0 1 N N N N N N 4.202 8.270 16.016 5.442 -2.541 -1.155 H4 A1BZS 44 A1BZS H5 H5 H 0 1 N N N N N N 3.750 7.161 17.355 5.483 -2.522 0.624 H5 A1BZS 45 A1BZS H6 H6 H 0 1 N N N N N N 6.444 8.824 16.012 7.071 -1.296 -2.449 H6 A1BZS 46 A1BZS H7 H7 H 0 1 N N N N N N -4.850 5.555 12.566 -4.098 -0.238 -0.963 H7 A1BZS 47 A1BZS H8 H8 H 0 1 N N N N N N -5.214 3.799 12.668 -4.057 -0.219 0.817 H8 A1BZS 48 A1BZS H9 H9 H 0 1 N N N N N N 10.470 5.488 15.640 10.475 1.882 0.957 H9 A1BZS 49 A1BZS H10 H10 H 0 1 N N N N N N 12.789 5.014 16.315 12.750 2.814 0.887 H10 A1BZS 50 A1BZS H11 H11 H 0 1 N N N N N N 13.487 5.322 18.661 14.471 1.765 -0.525 H11 A1BZS 51 A1BZS H12 H12 H 0 1 N N N N N N 11.852 6.091 20.337 13.925 -0.219 -1.873 H12 A1BZS 52 A1BZS H13 H13 H 0 1 N N N N N N 9.537 6.594 19.671 11.657 -1.171 -1.806 H13 A1BZS 53 A1BZS H14 H14 H 0 1 N N N N N N 8.781 8.365 16.595 9.340 -0.348 -2.522 H14 A1BZS 54 A1BZS H15 H15 H 0 1 N N N N N N 5.362 4.870 17.198 7.173 -1.257 1.815 H15 A1BZS 55 A1BZS H16 H16 H 0 1 N N N N N N 3.626 5.418 15.758 4.744 -0.216 -1.056 H16 A1BZS 56 A1BZS H18 H18 H 0 1 N N N N N N 2.112 7.671 14.694 3.070 -1.977 -1.107 H18 A1BZS 57 A1BZS H19 H19 H 0 1 N N N N N N 1.715 6.868 16.251 3.111 -1.957 0.672 H19 A1BZS 58 A1BZS H20 H20 H 0 1 N N N N N N 1.276 4.791 15.150 2.422 0.425 0.661 H20 A1BZS 59 A1BZS H21 H21 H 0 1 N N N N N N 1.898 5.425 13.588 2.382 0.405 -1.118 H21 A1BZS 60 A1BZS H22 H22 H 0 1 N N N N N N 0.031 6.899 13.325 0.648 -1.367 -1.059 H22 A1BZS 61 A1BZS H23 H23 H 0 1 N N N N N N -0.478 6.687 15.034 0.689 -1.347 0.721 H23 A1BZS 62 A1BZS H24 H24 H 0 1 N N N N N N -0.895 4.261 14.540 0.000 1.035 0.710 H24 A1BZS 63 A1BZS H25 H25 H 0 1 N N N N N N -0.545 4.602 12.811 -0.041 1.015 -1.069 H25 A1BZS 64 A1BZS H26 H26 H 0 1 N N N N N N -2.360 6.170 12.884 -1.673 -0.727 0.659 H26 A1BZS 65 A1BZS H28 H28 H 0 1 N N N N N N -2.949 3.413 13.635 -2.412 1.579 -1.022 H28 A1BZS 66 A1BZS H29 H29 H 0 1 N N N N N N -2.890 4.124 11.986 -2.371 1.599 0.758 H29 A1BZS 67 A1BZS H30 H30 H 0 1 N N N N N N -4.362 5.364 14.928 -4.626 2.395 -0.090 H30 A1BZS 68 A1BZS H31 H31 H 0 1 N N N N N N -5.951 2.420 19.746 -10.617 2.759 0.039 H31 A1BZS 69 A1BZS H32 H32 H 0 1 N N N N N N -6.264 6.477 18.965 -7.600 5.610 -0.058 H32 A1BZS 70 A1BZS H33 H33 H 0 1 N N N N N N -5.832 6.162 16.614 -5.843 3.908 -0.078 H33 A1BZS 71 A1BZS H34 H34 H 0 1 N N N N N N -5.076 -3.544 13.958 -11.995 -3.292 0.144 H34 A1BZS 72 A1BZS H35 H35 H 0 1 N N N N N N -5.750 -1.957 13.792 -11.536 -4.908 0.155 H35 A1BZS 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BZS C9 C8 SING N N 1 A1BZS C9 N3 SING N N 2 A1BZS C8 N2 SING N N 3 A1BZS N3 C10 SING N N 4 A1BZS C10 C11 SING N N 5 A1BZS C11 C12 SING N N 6 A1BZS N C SING N N 7 A1BZS N2 C7 SING N N 8 A1BZS C12 C13 SING N N 9 A1BZS N1 C7 DOUB Y N 10 A1BZS N1 C5 SING Y N 11 A1BZS C13 N4 SING N N 12 A1BZS C6 C5 DOUB Y N 13 A1BZS C6 C1 SING Y N 14 A1BZS C7 C27 SING Y N 15 A1BZS N4 C14 SING N N 16 A1BZS C C1 SING N N 17 A1BZS C O DOUB N N 18 A1BZS C5 C4 SING Y N 19 A1BZS C1 C2 DOUB Y N 20 A1BZS C14 C15 SING N N 21 A1BZS C16 C15 DOUB Y N 22 A1BZS C16 C17 SING Y N 23 A1BZS C15 C20 SING Y N 24 A1BZS C26 C25 DOUB Y N 25 A1BZS C26 C21 SING Y N 26 A1BZS C17 C18 DOUB Y N 27 A1BZS C27 C28 DOUB Y N 28 A1BZS C27 C31 SING Y N 29 A1BZS C25 C24 SING Y N 30 A1BZS C20 C19 DOUB Y N 31 A1BZS C4 C31 SING Y N 32 A1BZS C4 C3 DOUB Y N 33 A1BZS C18 C19 SING Y N 34 A1BZS C18 C21 SING N N 35 A1BZS C28 C29 SING Y N 36 A1BZS C19 CL SING N N 37 A1BZS C2 C3 SING Y N 38 A1BZS C21 C22 DOUB Y N 39 A1BZS C31 C30 DOUB Y N 40 A1BZS C24 C23 DOUB Y N 41 A1BZS C29 N5 DOUB Y N 42 A1BZS C22 C23 SING Y N 43 A1BZS C30 N5 SING Y N 44 A1BZS C2 H1 SING N N 45 A1BZS C3 H2 SING N N 46 A1BZS C6 H3 SING N N 47 A1BZS C14 H4 SING N N 48 A1BZS C14 H5 SING N N 49 A1BZS C16 H6 SING N N 50 A1BZS C8 H7 SING N N 51 A1BZS C8 H8 SING N N 52 A1BZS C26 H9 SING N N 53 A1BZS C25 H10 SING N N 54 A1BZS C24 H11 SING N N 55 A1BZS C23 H12 SING N N 56 A1BZS C22 H13 SING N N 57 A1BZS C17 H14 SING N N 58 A1BZS C20 H15 SING N N 59 A1BZS N4 H16 SING N N 60 A1BZS C13 H18 SING N N 61 A1BZS C13 H19 SING N N 62 A1BZS C12 H20 SING N N 63 A1BZS C12 H21 SING N N 64 A1BZS C11 H22 SING N N 65 A1BZS C11 H23 SING N N 66 A1BZS C10 H24 SING N N 67 A1BZS C10 H25 SING N N 68 A1BZS N3 H26 SING N N 69 A1BZS C9 H28 SING N N 70 A1BZS C9 H29 SING N N 71 A1BZS N2 H30 SING N N 72 A1BZS C30 H31 SING N N 73 A1BZS C29 H32 SING N N 74 A1BZS C28 H33 SING N N 75 A1BZS N H34 SING N N 76 A1BZS N H35 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BZS SMILES ACDLabs 14.52 "NC(=O)c1cc2nc(NCCNCCCCNCc3ccc(c4ccccc4)c(Cl)c3)c3ccncc3c2cc1" A1BZS InChI InChI 1.06 "InChI=1S/C32H33ClN6O/c33-29-18-22(8-10-25(29)23-6-2-1-3-7-23)20-36-14-5-4-13-35-16-17-38-32-27-12-15-37-21-28(27)26-11-9-24(31(34)40)19-30(26)39-32/h1-3,6-12,15,18-19,21,35-36H,4-5,13-14,16-17,20H2,(H2,34,40)(H,38,39)" A1BZS InChIKey InChI 1.06 UDMMSRACJKZLOJ-UHFFFAOYSA-N A1BZS SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCNCCCCNCc3ccc(c(Cl)c3)c4ccccc4)c5ccncc25" A1BZS SMILES CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCNCCCCNCc3ccc(c(Cl)c3)c4ccccc4)c5ccncc25" A1BZS SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2ccc(cc2Cl)CNCCCCNCCNc3c4ccncc4c5ccc(cc5n3)C(=O)N" A1BZS SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2ccc(cc2Cl)CNCCCCNCCNc3c4ccncc4c5ccc(cc5n3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BZS "SYSTEMATIC NAME" ACDLabs 14.52 "5-({2-[(4-{[(2-chloro[1,1'-biphenyl]-4-yl)methyl]amino}butyl)amino]ethyl}amino)benzo[c][2,6]naphthyridine-8-carboxamide" A1BZS "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[4-[(3-chloranyl-4-phenyl-phenyl)methylamino]butylamino]ethylamino]benzo[c][2,6]naphthyridine-8-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BZS "Create component" 2025-03-12 RCSB A1BZS "Initial release" 2026-01-14 RCSB #