data_A1C0G # _chem_comp.id A1C0G _chem_comp.name "4-methyl-2-[(2S)-2-methylazetidin-1-yl]-6,7-dihydro-5H-cyclopenta[d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-10 _chem_comp.pdbx_modified_date 2026-01-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 203.283 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1C0G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Z28 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1C0G C10 C1 C 0 1 N N N N N N -3.256 -4.303 21.490 3.964 0.817 -0.197 C10 A1C0G 1 A1C0G C13 C2 C 0 1 N N N N N N -2.613 -0.426 14.568 -3.721 0.571 -0.826 C13 A1C0G 2 A1C0G C15 C3 C 0 1 N N N N N N -2.593 1.523 16.273 -3.611 -0.867 1.302 C15 A1C0G 3 A1C0G C02 C4 C 0 1 Y N N N N N -3.198 -3.157 19.413 1.583 0.878 0.270 C02 A1C0G 4 A1C0G C03 C5 C 0 1 Y N N N N N -4.025 -2.414 20.256 1.901 -0.444 0.008 C03 A1C0G 5 A1C0G C04 C6 C 0 1 Y N N N N N -4.427 -1.151 19.806 0.871 -1.354 -0.168 C04 A1C0G 6 A1C0G C06 C7 C 0 1 Y N N N N N -3.219 -1.472 17.848 -0.653 0.336 0.172 C06 A1C0G 7 A1C0G C08 C8 C 0 1 N N N N N N -5.325 -0.221 20.602 1.174 -2.802 -0.455 C08 A1C0G 8 A1C0G C09 C9 C 0 1 N N N N N N -2.842 -4.488 20.024 2.851 1.687 0.426 C09 A1C0G 9 A1C0G C11 C10 C 0 1 N N N N N N -4.310 -3.182 21.526 3.402 -0.612 -0.032 C11 A1C0G 10 A1C0G C12 C11 C 0 1 N N S N N N -3.210 0.186 15.835 -2.892 -0.399 0.035 C12 A1C0G 11 A1C0G C14 C12 C 0 1 N N N N N N -2.349 -1.678 15.396 -2.418 1.370 -1.006 C14 A1C0G 12 A1C0G N01 N1 N 0 1 Y N N N N N -2.780 -2.710 18.205 0.309 1.231 0.345 N01 A1C0G 13 A1C0G N05 N2 N 0 1 Y N N N N N -4.027 -0.670 18.595 -0.381 -0.936 -0.080 N05 A1C0G 14 A1C0G N07 N3 N 0 1 N N N N N N -2.806 -0.986 16.602 -1.974 0.740 0.257 N07 A1C0G 15 A1C0G H101 H1 H 0 0 N N N N N N -3.685 -5.237 21.881 4.102 1.060 -1.250 H101 A1C0G 16 A1C0G H102 H2 H 0 0 N N N N N N -2.383 -4.019 22.096 4.900 0.930 0.351 H102 A1C0G 17 A1C0G H131 H3 H 0 0 N N N N N N -3.326 -0.562 13.741 -4.095 0.127 -1.749 H131 A1C0G 18 A1C0G H132 H4 H 0 0 N N N N N N -1.710 0.078 14.194 -4.491 1.106 -0.270 H132 A1C0G 19 A1C0G H151 H5 H 0 0 N N N N N N -2.968 2.330 15.627 -4.317 -1.657 1.048 H151 A1C0G 20 A1C0G H152 H6 H 0 0 N N N N N N -2.871 1.730 17.317 -2.879 -1.248 2.015 H152 A1C0G 21 A1C0G H153 H7 H 0 0 N N N N N N -1.498 1.466 16.190 -4.148 -0.029 1.746 H153 A1C0G 22 A1C0G H081 H8 H 0 0 N N N N N N -5.493 0.705 20.032 1.250 -3.350 0.484 H081 A1C0G 23 A1C0G H082 H9 H 0 0 N N N N N N -6.289 -0.715 20.791 0.373 -3.227 -1.060 H082 A1C0G 24 A1C0G H083 H10 H 0 0 N N N N N N -4.844 0.022 21.561 2.116 -2.876 -0.997 H083 A1C0G 25 A1C0G H091 H11 H 0 0 N N N N N N -3.406 -5.306 19.552 3.057 1.867 1.481 H091 A1C0G 26 A1C0G H092 H12 H 0 0 N N N N N N -1.764 -4.689 19.938 2.765 2.632 -0.110 H092 A1C0G 27 A1C0G H111 H13 H 0 0 N N N N N N -4.180 -2.544 22.413 3.691 -1.232 -0.880 H111 A1C0G 28 A1C0G H112 H14 H 0 0 N N N N N N -5.329 -3.596 21.519 3.757 -1.053 0.900 H112 A1C0G 29 A1C0G H121 H15 H 0 0 N N N N N N -4.304 0.268 15.754 -2.449 -1.219 -0.530 H121 A1C0G 30 A1C0G H141 H16 H 0 0 N N N N N N -1.292 -1.980 15.426 -1.835 1.068 -1.876 H141 A1C0G 31 A1C0G H142 H17 H 0 0 N N N N N N -2.969 -2.541 15.113 -2.552 2.449 -0.938 H142 A1C0G 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1C0G N01 C02 DOUB Y N 1 A1C0G N01 C06 SING Y N 2 A1C0G C02 C03 SING Y N 3 A1C0G C02 C09 SING N N 4 A1C0G C03 C04 DOUB Y N 5 A1C0G C03 C11 SING N N 6 A1C0G C04 N05 SING Y N 7 A1C0G C04 C08 SING N N 8 A1C0G N05 C06 DOUB Y N 9 A1C0G C06 N07 SING N N 10 A1C0G N07 C12 SING N N 11 A1C0G N07 C14 SING N N 12 A1C0G C09 C10 SING N N 13 A1C0G C10 C11 SING N N 14 A1C0G C12 C13 SING N N 15 A1C0G C12 C15 SING N N 16 A1C0G C13 C14 SING N N 17 A1C0G C10 H101 SING N N 18 A1C0G C10 H102 SING N N 19 A1C0G C13 H131 SING N N 20 A1C0G C13 H132 SING N N 21 A1C0G C15 H151 SING N N 22 A1C0G C15 H152 SING N N 23 A1C0G C15 H153 SING N N 24 A1C0G C08 H081 SING N N 25 A1C0G C08 H082 SING N N 26 A1C0G C08 H083 SING N N 27 A1C0G C09 H091 SING N N 28 A1C0G C09 H092 SING N N 29 A1C0G C11 H111 SING N N 30 A1C0G C11 H112 SING N N 31 A1C0G C12 H121 SING N N 32 A1C0G C14 H141 SING N N 33 A1C0G C14 H142 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1C0G SMILES ACDLabs 14.52 "Cc1nc(nc2CCCc21)N1CCC1C" A1C0G InChI InChI 1.06 "InChI=1S/C12H17N3/c1-8-6-7-15(8)12-13-9(2)10-4-3-5-11(10)14-12/h8H,3-7H2,1-2H3/t8-/m0/s1" A1C0G InChIKey InChI 1.06 IUKLVJUZABBPPR-QMMMGPOBSA-N A1C0G SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCN1c2nc(C)c3CCCc3n2" A1C0G SMILES CACTVS 3.385 "C[CH]1CCN1c2nc(C)c3CCCc3n2" A1C0G SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c2c(nc(n1)N3CC[C@@H]3C)CCC2" A1C0G SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c2c(nc(n1)N3CCC3C)CCC2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1C0G "SYSTEMATIC NAME" ACDLabs 14.52 "4-methyl-2-[(2S)-2-methylazetidin-1-yl]-6,7-dihydro-5H-cyclopenta[d]pyrimidine" A1C0G "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-methyl-2-[(2~{S})-2-methylazetidin-1-yl]-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1C0G "Create component" 2025-11-10 RCSB A1C0G "Initial release" 2026-01-07 RCSB #