data_A1C0I # _chem_comp.id A1C0I _chem_comp.name "4-{2-[(2S)-2-methylazetidin-1-yl]-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl}benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-10 _chem_comp.pdbx_modified_date 2026-01-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 308.378 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1C0I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Z29 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1C0I C10 C1 C 0 1 N N N N N N -2.298 -1.479 15.215 4.130 -1.479 1.096 C10 A1C0I 1 A1C0I C13 C2 C 0 1 Y N N N N N -5.765 0.854 19.971 -1.941 0.889 -0.762 C13 A1C0I 2 A1C0I C15 C3 C 0 1 Y N N N N N -7.804 1.004 21.275 -3.723 -0.496 0.060 C15 A1C0I 3 A1C0I C17 C4 C 0 1 Y N N N N N -6.809 -1.152 20.818 -1.468 -0.917 0.772 C17 A1C0I 4 A1C0I C20 C5 C 0 1 N N N N N N -4.497 -3.427 21.166 0.047 3.111 0.054 C20 A1C0I 5 A1C0I C21 C6 C 0 1 N N N N N N -8.882 1.853 21.918 -5.160 -0.844 0.093 C21 A1C0I 6 A1C0I C02 C7 C 0 1 Y N N N N N -3.177 -3.171 19.187 2.185 2.096 -0.064 C02 A1C0I 7 A1C0I C03 C8 C 0 1 Y N N N N N -4.186 -2.570 19.953 0.830 1.822 -0.023 C03 A1C0I 8 A1C0I C04 C9 C 0 1 Y N N N N N -4.686 -1.342 19.468 0.416 0.488 -0.056 C04 A1C0I 9 A1C0I C06 C10 C 0 1 Y N N N N N -3.214 -1.441 17.658 2.624 -0.166 -0.163 C06 A1C0I 10 A1C0I C08 C11 C 0 1 N N S N N N -3.328 0.275 15.747 2.892 -2.513 -0.258 C08 A1C0I 11 A1C0I C09 C12 C 0 1 N N N N N N -2.681 -0.209 14.448 3.991 -2.965 0.720 C09 A1C0I 12 A1C0I C11 C13 C 0 1 N N N N N N -2.955 1.691 16.241 2.952 -3.210 -1.618 C11 A1C0I 13 A1C0I C12 C14 C 0 1 Y N N N N N -5.764 -0.536 20.114 -1.026 0.147 -0.014 C12 A1C0I 14 A1C0I C14 C15 C 0 1 Y N N N N N -6.769 1.618 20.558 -3.281 0.572 -0.724 C14 A1C0I 15 A1C0I C16 C16 C 0 1 Y N N N N N -7.824 -0.391 21.400 -2.806 -1.242 0.804 C16 A1C0I 16 A1C0I C18 C17 C 0 1 N N N N N N -2.706 -4.464 19.788 2.404 3.595 -0.017 C18 A1C0I 17 A1C0I C19 C18 C 0 1 N N N N N N -3.355 -4.466 21.180 1.069 4.181 0.493 C19 A1C0I 18 A1C0I N01 N1 N 0 1 Y N N N N N -2.683 -2.623 18.054 3.045 1.090 -0.134 N01 A1C0I 19 A1C0I N05 N2 N 0 1 Y N N N N N -4.201 -0.781 18.322 1.337 -0.471 -0.126 N05 A1C0I 20 A1C0I N07 N3 N 0 1 N N N N N N -2.741 -0.854 16.474 3.556 -1.187 -0.236 N07 A1C0I 21 A1C0I N22 N4 N 0 1 N N N N N N -9.889 1.187 22.497 -6.044 -0.123 -0.624 N22 A1C0I 22 A1C0I O23 O1 O 0 1 N N N N N N -8.815 3.086 21.936 -5.543 -1.779 0.768 O23 A1C0I 23 A1C0I H101 H1 H 0 0 N N N N N N -1.224 -1.715 15.185 3.493 -1.173 1.926 H101 A1C0I 24 A1C0I H102 H2 H 0 0 N N N N N N -2.877 -2.369 14.928 5.163 -1.150 1.211 H102 A1C0I 25 A1C0I H131 H3 H 0 0 N N N N N N -4.984 1.337 19.403 -1.599 1.715 -1.367 H131 A1C0I 26 A1C0I H171 H4 H 0 0 N N N N N N -6.829 -2.228 20.911 -0.759 -1.492 1.350 H171 A1C0I 27 A1C0I H201 H5 H 0 0 N N N N N N -4.490 -2.823 22.085 -0.367 3.361 -0.923 H201 A1C0I 28 A1C0I H202 H6 H 0 0 N N N N N N -5.475 -3.920 21.058 -0.751 3.025 0.791 H202 A1C0I 29 A1C0I H081 H7 H 0 0 N N N N N N -4.422 0.177 15.683 1.891 -2.512 0.175 H081 A1C0I 30 A1C0I H091 H8 H 0 0 N N N N N N -3.381 -0.367 13.614 4.872 -3.378 0.230 H091 A1C0I 31 A1C0I H092 H9 H 0 0 N N N N N N -1.830 0.396 14.103 3.623 -3.590 1.534 H092 A1C0I 32 A1C0I H111 H10 H 0 0 N N N N N N -3.458 2.443 15.615 2.508 -4.202 -1.538 H111 A1C0I 33 A1C0I H112 H11 H 0 0 N N N N N N -3.276 1.811 17.286 2.401 -2.623 -2.353 H112 A1C0I 34 A1C0I H113 H12 H 0 0 N N N N N N -1.866 1.828 16.174 3.992 -3.302 -1.933 H113 A1C0I 35 A1C0I H141 H13 H 0 0 N N N N N N -6.750 2.693 20.460 -3.989 1.150 -1.299 H141 A1C0I 36 A1C0I H161 H14 H 0 0 N N N N N N -8.621 -0.876 21.944 -3.146 -2.073 1.404 H161 A1C0I 37 A1C0I H181 H15 H 0 0 N N N N N N -3.049 -5.323 19.192 3.212 3.838 0.673 H181 A1C0I 38 A1C0I H182 H16 H 0 0 N N N N N N -1.609 -4.486 19.865 2.628 3.976 -1.013 H182 A1C0I 39 A1C0I H191 H17 H 0 0 N N N N N N -3.759 -5.464 21.404 0.859 5.138 0.014 H191 A1C0I 40 A1C0I H192 H18 H 0 0 N N N N N N -2.610 -4.193 21.941 1.081 4.284 1.578 H192 A1C0I 41 A1C0I H221 H19 H 0 0 N N N N N N -10.618 1.689 22.963 -5.738 0.623 -1.163 H221 A1C0I 42 A1C0I H222 H20 H 0 0 N N N N N N -9.912 0.188 22.464 -6.986 -0.351 -0.603 H222 A1C0I 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1C0I N01 C02 DOUB Y N 1 A1C0I N01 C06 SING Y N 2 A1C0I C02 C03 SING Y N 3 A1C0I C02 C18 SING N N 4 A1C0I C03 C04 DOUB Y N 5 A1C0I C03 C20 SING N N 6 A1C0I C04 N05 SING Y N 7 A1C0I C04 C12 SING N N 8 A1C0I N05 C06 DOUB Y N 9 A1C0I C06 N07 SING N N 10 A1C0I N07 C08 SING N N 11 A1C0I N07 C10 SING N N 12 A1C0I C08 C09 SING N N 13 A1C0I C08 C11 SING N N 14 A1C0I C09 C10 SING N N 15 A1C0I C12 C13 DOUB Y N 16 A1C0I C12 C17 SING Y N 17 A1C0I C13 C14 SING Y N 18 A1C0I C14 C15 DOUB Y N 19 A1C0I C15 C16 SING Y N 20 A1C0I C15 C21 SING N N 21 A1C0I C16 C17 DOUB Y N 22 A1C0I C18 C19 SING N N 23 A1C0I C19 C20 SING N N 24 A1C0I C21 N22 SING N N 25 A1C0I C21 O23 DOUB N N 26 A1C0I C10 H101 SING N N 27 A1C0I C10 H102 SING N N 28 A1C0I C13 H131 SING N N 29 A1C0I C17 H171 SING N N 30 A1C0I C20 H201 SING N N 31 A1C0I C20 H202 SING N N 32 A1C0I C08 H081 SING N N 33 A1C0I C09 H091 SING N N 34 A1C0I C09 H092 SING N N 35 A1C0I C11 H111 SING N N 36 A1C0I C11 H112 SING N N 37 A1C0I C11 H113 SING N N 38 A1C0I C14 H141 SING N N 39 A1C0I C16 H161 SING N N 40 A1C0I C18 H181 SING N N 41 A1C0I C18 H182 SING N N 42 A1C0I C19 H191 SING N N 43 A1C0I C19 H192 SING N N 44 A1C0I N22 H221 SING N N 45 A1C0I N22 H222 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1C0I SMILES ACDLabs 14.52 "NC(=O)c1ccc(cc1)c1nc(nc2CCCc21)N1CCC1C" A1C0I InChI InChI 1.06 "InChI=1S/C18H20N4O/c1-11-9-10-22(11)18-20-15-4-2-3-14(15)16(21-18)12-5-7-13(8-6-12)17(19)23/h5-8,11H,2-4,9-10H2,1H3,(H2,19,23)/t11-/m0/s1" A1C0I InChIKey InChI 1.06 SLTRTHWSXPODKH-NSHDSACASA-N A1C0I SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCN1c2nc3CCCc3c(n2)c4ccc(cc4)C(N)=O" A1C0I SMILES CACTVS 3.385 "C[CH]1CCN1c2nc3CCCc3c(n2)c4ccc(cc4)C(N)=O" A1C0I SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CCN1c2nc3c(c(n2)c4ccc(cc4)C(=O)N)CCC3" A1C0I SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CCN1c2nc3c(c(n2)c4ccc(cc4)C(=O)N)CCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1C0I "SYSTEMATIC NAME" ACDLabs 14.52 "4-{2-[(2S)-2-methylazetidin-1-yl]-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl}benzamide" A1C0I "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[2-[(2~{S})-2-methylazetidin-1-yl]-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-4-yl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1C0I "Create component" 2025-11-10 RCSB A1C0I "Initial release" 2026-01-07 RCSB #