data_A1C5O # _chem_comp.id A1C5O _chem_comp.name "3,3'-methylenebis(5,7-difluoro-1H-indole)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H10 F4 N2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-01-23 _chem_comp.pdbx_modified_date 2026-08-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.268 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1C5O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 10JB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1C5O C10 C1 C 0 1 Y N N N N N 83.078 82.845 80.321 -1.006 -0.708 -1.156 C10 A1C5O 1 A1C5O C13 C2 C 0 1 Y N N N N N 83.346 83.770 82.325 -2.833 -1.158 0.156 C13 A1C5O 2 A1C5O C14 C3 C 0 1 Y N N N N N 83.092 82.571 81.710 -2.215 -0.124 -0.569 C14 A1C5O 3 A1C5O C15 C4 C 0 1 Y N N N N N 82.909 81.402 82.487 -2.794 1.147 -0.604 C15 A1C5O 4 A1C5O C16 C5 C 0 1 Y N N N N N 82.987 81.468 83.875 -3.970 1.380 0.074 C16 A1C5O 5 A1C5O C18 C6 C 0 1 Y N N N N N 83.245 82.689 84.502 -4.582 0.358 0.791 C18 A1C5O 6 A1C5O C21 C7 C 0 1 Y N N N N N 80.498 82.818 74.917 4.022 0.901 0.836 C21 A1C5O 7 A1C5O C23 C8 C 0 1 Y N N N N N 79.595 81.762 74.923 4.581 -0.359 0.791 C23 A1C5O 8 A1C5O C02 C9 C 0 1 Y N N N N N 79.597 80.849 75.981 3.970 -1.380 0.072 C02 A1C5O 9 A1C5O C03 C10 C 0 1 Y N N N N N 80.502 80.997 77.027 2.793 -1.147 -0.605 C03 A1C5O 10 A1C5O C04 C11 C 0 1 Y N N N N N 81.423 82.074 77.021 2.214 0.125 -0.569 C04 A1C5O 11 A1C5O C05 C12 C 0 1 Y N N N N N 81.422 82.970 75.984 2.833 1.157 0.157 C05 A1C5O 12 A1C5O C07 C13 C 0 1 Y N N N N N 83.019 83.636 77.360 0.964 1.995 -0.771 C07 A1C5O 13 A1C5O C08 C14 C 0 1 Y N N N N N 82.442 82.501 77.903 1.006 0.709 -1.155 C08 A1C5O 14 A1C5O C09 C15 C 0 1 N N N N N N 82.834 81.818 79.214 -0.000 0.001 -2.026 C09 A1C5O 15 A1C5O C11 C16 C 0 1 Y N N N N N 83.325 84.198 80.157 -0.961 -1.992 -0.768 C11 A1C5O 16 A1C5O C19 C17 C 0 1 Y N N N N N 83.425 83.836 83.741 -4.022 -0.902 0.835 C19 A1C5O 17 A1C5O F01 F1 F 0 1 N N N N N N 78.710 79.811 75.988 4.532 -2.608 0.039 F01 A1C5O 18 A1C5O F17 F2 F 0 1 N N N N N N 82.810 80.340 84.623 -4.532 2.608 0.042 F17 A1C5O 19 A1C5O F20 F3 F 0 1 N N N N N N 83.677 85.027 84.356 -4.626 -1.887 1.536 F20 A1C5O 20 A1C5O F22 F4 F 0 1 N N N N N N 80.495 83.709 73.883 4.623 1.883 1.542 F22 A1C5O 21 A1C5O N06 N1 N 0 1 Y N N N N N 82.396 83.901 76.217 2.047 2.282 0.014 N06 A1C5O 22 A1C5O N12 N2 N 0 1 Y N N N N N 83.481 84.730 81.362 -2.042 -2.279 0.019 N12 A1C5O 23 A1C5O H1 H1 H 0 1 N N N N N N 82.709 80.458 82.002 -2.321 1.943 -1.160 H1 A1C5O 24 A1C5O H2 H2 H 0 1 N N N N N N 83.304 82.741 85.579 -5.503 0.552 1.319 H2 A1C5O 25 A1C5O H3 H3 H 0 1 N N N N N N 78.892 81.647 74.111 5.503 -0.554 1.319 H3 A1C5O 26 A1C5O H4 H4 H 0 1 N N N N N N 80.503 80.291 77.844 2.321 -1.942 -1.163 H4 A1C5O 27 A1C5O H5 H5 H 0 1 N N N N N N 83.831 84.205 77.789 0.190 2.698 -1.041 H5 A1C5O 28 A1C5O H6 H6 H 0 1 N N N N N N 82.023 81.143 79.523 0.512 -0.726 -2.655 H6 A1C5O 29 A1C5O H7 H7 H 0 1 N N N N N N 83.754 81.237 79.055 -0.513 0.729 -2.655 H7 A1C5O 30 A1C5O H8 H8 H 0 1 N N N N N N 83.381 84.725 79.216 -0.187 -2.695 -1.038 H8 A1C5O 31 A1C5O H9 H9 H 0 1 N N N N N N 82.609 84.670 75.614 2.234 3.147 0.411 H9 A1C5O 32 A1C5O H10 H10 H 0 1 N N N N N N 83.670 85.696 81.540 -2.227 -3.144 0.419 H10 A1C5O 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1C5O F22 C21 SING N N 1 A1C5O C21 C23 DOUB Y N 2 A1C5O C21 C05 SING Y N 3 A1C5O C23 C02 SING Y N 4 A1C5O C02 F01 SING N N 5 A1C5O C02 C03 DOUB Y N 6 A1C5O C05 N06 SING Y N 7 A1C5O C05 C04 DOUB Y N 8 A1C5O N06 C07 SING Y N 9 A1C5O C04 C03 SING Y N 10 A1C5O C04 C08 SING Y N 11 A1C5O C07 C08 DOUB Y N 12 A1C5O C08 C09 SING N N 13 A1C5O C09 C10 SING N N 14 A1C5O C11 C10 DOUB Y N 15 A1C5O C11 N12 SING Y N 16 A1C5O C10 C14 SING Y N 17 A1C5O N12 C13 SING Y N 18 A1C5O C14 C13 DOUB Y N 19 A1C5O C14 C15 SING Y N 20 A1C5O C13 C19 SING Y N 21 A1C5O C15 C16 DOUB Y N 22 A1C5O C19 F20 SING N N 23 A1C5O C19 C18 DOUB Y N 24 A1C5O C16 C18 SING Y N 25 A1C5O C16 F17 SING N N 26 A1C5O C15 H1 SING N N 27 A1C5O C18 H2 SING N N 28 A1C5O C23 H3 SING N N 29 A1C5O C03 H4 SING N N 30 A1C5O C07 H5 SING N N 31 A1C5O C09 H6 SING N N 32 A1C5O C09 H7 SING N N 33 A1C5O C11 H8 SING N N 34 A1C5O N06 H9 SING N N 35 A1C5O N12 H10 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1C5O SMILES ACDLabs 14.52 "Fc1cc2c([NH]cc2Cc2c[NH]c3c(F)cc(F)cc32)c(F)c1" A1C5O InChI InChI 1.06 "InChI=1S/C17H10F4N2/c18-10-2-12-8(6-22-16(12)14(20)4-10)1-9-7-23-17-13(9)3-11(19)5-15(17)21/h2-7,22-23H,1H2" A1C5O InChIKey InChI 1.06 VOZFGFKTXNHCLF-UHFFFAOYSA-N A1C5O SMILES_CANONICAL CACTVS 3.385 "Fc1cc(F)c2[nH]cc(Cc3c[nH]c4c(F)cc(F)cc34)c2c1" A1C5O SMILES CACTVS 3.385 "Fc1cc(F)c2[nH]cc(Cc3c[nH]c4c(F)cc(F)cc34)c2c1" A1C5O SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c(cc(c2c1c(c[nH]2)Cc3c[nH]c4c3cc(cc4F)F)F)F" A1C5O SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c(cc(c2c1c(c[nH]2)Cc3c[nH]c4c3cc(cc4F)F)F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1C5O "SYSTEMATIC NAME" ACDLabs 14.52 "3,3'-methylenebis(5,7-difluoro-1H-indole)" A1C5O "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-[[5,7-bis(fluoranyl)-1~{H}-indol-3-yl]methyl]-5,7-bis(fluoranyl)-1~{H}-indole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1C5O "Create component" 2026-01-23 RCSB A1C5O "Initial release" 2026-08-26 RCSB #