data_A1CA2 # _chem_comp.id A1CA2 _chem_comp.name N-acetyl-S-geranylgeranyl-L-cysteine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H41 N O3 S" _chem_comp.mon_nstd_parent_comp_id CYS _chem_comp.pdbx_synonyms "N-acetyl-S-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-L-cysteine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-01 _chem_comp.pdbx_modified_date 2025-08-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 435.663 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CA2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ODX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CA2 C01 C1 C 0 1 N N N N N N 4.961 -16.648 1.506 6.903 3.615 -1.044 C01 A1CA2 1 A1CA2 C02 C2 C 0 1 N N N N N N 5.423 -16.768 2.969 7.226 2.490 -0.095 C02 A1CA2 2 A1CA2 CA C3 C 0 1 N N R N Y N 6.752 -17.921 4.744 7.271 0.123 0.480 C04 A1CA2 3 A1CA2 C C4 C 0 1 N N N N Y Y 7.964 -17.125 5.180 8.710 -0.286 0.303 C05 A1CA2 4 A1CA2 CB C5 C 0 1 N N N N N N 6.935 -19.406 5.106 6.361 -1.071 0.184 C08 A1CA2 5 A1CA2 C10 C6 C 0 1 N N N N N N 9.853 -19.842 4.696 3.721 -2.102 0.009 C10 A1CA2 6 A1CA2 C11 C7 C 0 1 N N N N N N 9.803 -20.446 6.125 2.241 -1.853 0.143 C11 A1CA2 7 A1CA2 C12 C8 C 0 1 N N N N N N 10.518 -19.918 7.140 1.465 -1.937 -0.909 C12 A1CA2 8 A1CA2 C13 C9 C 0 1 N N N N N N 11.448 -18.702 6.989 2.064 -2.181 -2.270 C13 A1CA2 9 A1CA2 C14 C10 C 0 1 N N N N N N 10.363 -20.602 8.520 -0.027 -1.791 -0.757 C14 A1CA2 10 A1CA2 C15 C11 C 0 1 N N N N N N 9.446 -19.682 9.394 -0.428 -0.340 -1.031 C15 A1CA2 11 A1CA2 C16 C12 C 0 1 N N N N N N 9.672 -20.246 10.814 -1.920 -0.194 -0.880 C16 A1CA2 12 A1CA2 C17 C13 C 0 1 N N N N N N 8.607 -20.642 11.554 -2.411 0.626 0.016 C17 A1CA2 13 A1CA2 C18 C14 C 0 1 N N N N N N 8.802 -21.246 12.983 -3.900 0.838 0.109 C18 A1CA2 14 A1CA2 C19 C15 C 0 1 N N N N N N 7.892 -20.538 14.000 -4.483 -0.094 1.172 C19 A1CA2 15 A1CA2 C20 C16 C 0 1 N N N N N N 8.615 -19.338 14.644 -5.972 0.119 1.265 C20 A1CA2 16 A1CA2 C21 C17 C 0 1 N N N N N N 8.024 -18.141 14.645 -6.793 -0.862 0.980 C21 A1CA2 17 A1CA2 C22 C18 C 0 1 N N N N N N 6.655 -17.927 14.019 -6.248 -2.201 0.556 C22 A1CA2 18 A1CA2 C23 C19 C 0 1 N N N N N N 8.705 -16.922 15.319 -8.282 -0.650 1.078 C23 A1CA2 19 A1CA2 C24 C20 C 0 1 N N N N N N 8.072 -16.863 16.742 -8.835 -0.275 -0.298 C24 A1CA2 20 A1CA2 C25 C21 C 0 1 N N N N N N 8.141 -15.415 17.273 -10.324 -0.064 -0.200 C25 A1CA2 21 A1CA2 C26 C22 C 0 1 N N N N N N 7.594 -15.044 18.434 -10.837 1.114 -0.458 C26 A1CA2 22 A1CA2 C27 C23 C 0 1 N N N N N N 6.874 -16.030 19.361 -9.937 2.262 -0.835 C27 A1CA2 23 A1CA2 C28 C24 C 0 1 N N N N N N 7.732 -13.569 18.839 -12.328 1.320 -0.378 C28 A1CA2 24 A1CA2 C29 C25 C 0 1 N N N N N N 7.101 -20.591 11.192 -1.486 1.355 0.956 C29 A1CA2 25 A1CA2 N N1 N 0 1 N N N Y Y N 6.369 -17.815 3.337 6.956 1.216 -0.443 N03 A1CA2 26 A1CA2 OXT O1 O 0 1 N N N N Y Y 8.321 -17.226 6.370 9.223 -1.277 1.049 O06 A1CA2 27 A1CA2 O O2 O 0 1 N N N N Y Y 8.556 -16.284 4.469 9.403 0.278 -0.510 O07 A1CA2 28 A1CA2 O30 O3 O 0 1 N N N N N N 5.042 -16.007 3.784 7.729 2.731 0.982 O30 A1CA2 29 A1CA2 SG S1 S 0 1 N N N N N N 8.194 -20.136 3.963 4.628 -0.580 0.397 S09 A1CA2 30 A1CA2 H013 H1 H 0 0 N N N N N N 4.276 -15.793 1.406 5.833 3.620 -1.251 H013 A1CA2 31 A1CA2 H011 H2 H 0 0 N N N N N N 5.836 -16.495 0.857 7.189 4.565 -0.593 H011 A1CA2 32 A1CA2 H012 H3 H 0 0 N N N N N N 4.441 -17.571 1.209 7.452 3.474 -1.975 H012 A1CA2 33 A1CA2 HA H4 H 0 0 N N N N Y N 5.903 -17.558 5.342 7.111 0.456 1.506 H041 A1CA2 34 A1CA2 HB2 H5 H 0 0 N N N N N N 7.282 -19.495 6.146 6.521 -1.404 -0.841 H081 A1CA2 35 A1CA2 HB3 H6 H 0 0 N N N N N N 5.978 -19.937 4.992 6.595 -1.885 0.871 H082 A1CA2 36 A1CA2 H101 H7 H 0 0 N N N N N N 10.629 -20.341 4.097 4.021 -2.890 0.700 H101 A1CA2 37 A1CA2 H102 H8 H 0 0 N N N N N N 10.064 -18.763 4.744 3.947 -2.409 -1.012 H102 A1CA2 38 A1CA2 H111 H9 H 0 0 N N N N N N 9.181 -21.309 6.311 1.820 -1.604 1.106 H111 A1CA2 39 A1CA2 H132 H10 H 0 0 N N N N N N 11.912 -18.472 7.959 2.223 -3.250 -2.411 H132 A1CA2 40 A1CA2 H133 H11 H 0 0 N N N N N N 12.233 -18.930 6.253 1.385 -1.810 -3.037 H133 A1CA2 41 A1CA2 H131 H12 H 0 0 N N N N N N 10.865 -17.835 6.647 3.018 -1.658 -2.345 H131 A1CA2 42 A1CA2 H142 H13 H 0 0 N N N N N N 9.898 -21.592 8.400 -0.531 -2.447 -1.468 H142 A1CA2 43 A1CA2 H141 H14 H 0 0 N N N N N N 11.348 -20.715 8.997 -0.318 -2.063 0.257 H141 A1CA2 44 A1CA2 H152 H15 H 0 0 N N N N N N 9.759 -18.630 9.329 0.075 0.316 -0.321 H152 A1CA2 45 A1CA2 H151 H16 H 0 0 N N N N N N 8.391 -19.770 9.094 -0.137 -0.068 -2.046 H151 A1CA2 46 A1CA2 H161 H17 H 0 0 N N N N N N 10.672 -20.324 11.215 -2.586 -0.764 -1.511 H161 A1CA2 47 A1CA2 H182 H18 H 0 0 N N N N N N 9.851 -21.120 13.288 -4.102 1.874 0.382 H182 A1CA2 48 A1CA2 H181 H19 H 0 0 N N N N N N 8.553 -22.317 12.960 -4.358 0.621 -0.856 H181 A1CA2 49 A1CA2 H192 H20 H 0 0 N N N N N N 6.988 -20.180 13.486 -4.280 -1.129 0.899 H192 A1CA2 50 A1CA2 H191 H21 H 0 0 N N N N N N 7.608 -21.252 14.787 -4.025 0.124 2.137 H191 A1CA2 51 A1CA2 H201 H22 H 0 0 N N N N N N 9.590 -19.465 15.090 -6.363 1.080 1.565 H201 A1CA2 52 A1CA2 H223 H23 H 0 0 N N N N N N 6.360 -16.873 14.132 -5.993 -2.786 1.439 H223 A1CA2 53 A1CA2 H221 H24 H 0 0 N N N N N N 6.697 -18.184 12.950 -7.001 -2.732 -0.026 H221 A1CA2 54 A1CA2 H222 H25 H 0 0 N N N N N N 5.917 -18.570 14.522 -5.356 -2.054 -0.053 H222 A1CA2 55 A1CA2 H231 H26 H 0 0 N N N N N N 9.793 -17.070 15.383 -8.757 -1.569 1.423 H231 A1CA2 56 A1CA2 H232 H27 H 0 0 N N N N N N 8.493 -15.999 14.760 -8.489 0.153 1.785 H232 A1CA2 57 A1CA2 H242 H28 H 0 0 N N N N N N 7.022 -17.185 16.690 -8.360 0.644 -0.642 H242 A1CA2 58 A1CA2 H241 H29 H 0 0 N N N N N N 8.627 -17.529 17.419 -8.628 -1.078 -1.005 H241 A1CA2 59 A1CA2 H251 H30 H 0 0 N N N N N N 8.653 -14.671 16.681 -10.968 -0.883 0.083 H251 A1CA2 60 A1CA2 H272 H31 H 0 0 N N N N N N 6.509 -15.497 20.252 -9.804 2.280 -1.917 H272 A1CA2 61 A1CA2 H271 H32 H 0 0 N N N N N N 6.023 -16.479 18.828 -10.387 3.199 -0.509 H271 A1CA2 62 A1CA2 H273 H33 H 0 0 N N N N N N 7.573 -16.822 19.668 -8.967 2.137 -0.353 H273 A1CA2 63 A1CA2 H281 H34 H 0 0 N N N N N N 7.239 -13.407 19.809 -12.598 1.626 0.632 H281 A1CA2 64 A1CA2 H283 H35 H 0 0 N N N N N N 8.798 -13.310 18.922 -12.626 2.095 -1.084 H283 A1CA2 65 A1CA2 H282 H36 H 0 0 N N N N N N 7.258 -12.934 18.076 -12.837 0.389 -0.625 H282 A1CA2 66 A1CA2 H291 H37 H 0 0 N N N N N N 6.509 -20.995 12.027 -1.113 2.258 0.472 H291 A1CA2 67 A1CA2 H292 H38 H 0 0 N N N N N N 6.805 -19.549 11.003 -2.028 1.627 1.862 H292 A1CA2 68 A1CA2 H293 H39 H 0 0 N N N N N N 6.920 -21.193 10.289 -0.647 0.709 1.215 H293 A1CA2 69 A1CA2 H H40 H 0 0 N N N Y Y N 6.743 -18.439 2.651 6.554 1.024 -1.304 H031 A1CA2 70 A1CA2 HXT H41 H 0 1 N N N N Y Y 9.023 -16.610 6.544 10.151 -1.503 0.900 H1 A1CA2 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CA2 C02 C01 SING N N 1 A1CA2 OXT C SING N N 2 A1CA2 O C DOUB N N 3 A1CA2 C CA SING N N 4 A1CA2 CB CA SING N N 5 A1CA2 SG CB SING N N 6 A1CA2 C10 SG SING N N 7 A1CA2 C11 C10 SING N N 8 A1CA2 C12 C11 DOUB N Z 9 A1CA2 C13 C12 SING N N 10 A1CA2 C14 C12 SING N N 11 A1CA2 C15 C14 SING N N 12 A1CA2 C16 C15 SING N N 13 A1CA2 C17 C16 DOUB N Z 14 A1CA2 C19 C18 SING N N 15 A1CA2 C20 C19 SING N N 16 A1CA2 C21 C20 DOUB N Z 17 A1CA2 C22 C21 SING N N 18 A1CA2 C23 C21 SING N N 19 A1CA2 C24 C23 SING N N 20 A1CA2 C25 C24 SING N N 21 A1CA2 C26 C25 DOUB N N 22 A1CA2 C27 C26 SING N N 23 A1CA2 C28 C26 SING N N 24 A1CA2 C18 C17 SING N N 25 A1CA2 C29 C17 SING N N 26 A1CA2 CA N SING N N 27 A1CA2 N C02 SING N N 28 A1CA2 O30 C02 DOUB N N 29 A1CA2 C01 H013 SING N N 30 A1CA2 C01 H011 SING N N 31 A1CA2 C01 H012 SING N N 32 A1CA2 CA HA SING N N 33 A1CA2 CB HB2 SING N N 34 A1CA2 CB HB3 SING N N 35 A1CA2 C10 H101 SING N N 36 A1CA2 C10 H102 SING N N 37 A1CA2 C11 H111 SING N N 38 A1CA2 C13 H132 SING N N 39 A1CA2 C13 H133 SING N N 40 A1CA2 C13 H131 SING N N 41 A1CA2 C14 H142 SING N N 42 A1CA2 C14 H141 SING N N 43 A1CA2 C15 H152 SING N N 44 A1CA2 C15 H151 SING N N 45 A1CA2 C16 H161 SING N N 46 A1CA2 C18 H182 SING N N 47 A1CA2 C18 H181 SING N N 48 A1CA2 C19 H192 SING N N 49 A1CA2 C19 H191 SING N N 50 A1CA2 C20 H201 SING N N 51 A1CA2 C22 H223 SING N N 52 A1CA2 C22 H221 SING N N 53 A1CA2 C22 H222 SING N N 54 A1CA2 C23 H231 SING N N 55 A1CA2 C23 H232 SING N N 56 A1CA2 C24 H242 SING N N 57 A1CA2 C24 H241 SING N N 58 A1CA2 C25 H251 SING N N 59 A1CA2 C27 H272 SING N N 60 A1CA2 C27 H271 SING N N 61 A1CA2 C27 H273 SING N N 62 A1CA2 C28 H281 SING N N 63 A1CA2 C28 H283 SING N N 64 A1CA2 C28 H282 SING N N 65 A1CA2 C29 H291 SING N N 66 A1CA2 C29 H292 SING N N 67 A1CA2 C29 H293 SING N N 68 A1CA2 N H SING N N 69 A1CA2 OXT HXT SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CA2 SMILES ACDLabs 14.52 "O=C(C)NC(CSC\C=C(/C)CC\C=C(/C)CC\C=C(/C)CC\C=C(/C)C)C(=O)O" A1CA2 InChI InChI 1.06 "InChI=1S/C25H41NO3S/c1-19(2)10-7-11-20(3)12-8-13-21(4)14-9-15-22(5)16-17-30-18-24(25(28)29)26-23(6)27/h10,12,14,16,24H,7-9,11,13,15,17-18H2,1-6H3,(H,26,27)(H,28,29)/t24-/m0/s1" A1CA2 InChIKey InChI 1.06 PKFBJSDMCRJYDC-DEOSSOPVSA-N A1CA2 SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCCC(/C)=C\CC\C(C)=C/CCC(/C)=C\CSC[C@H](NC(C)=O)C(O)=O" A1CA2 SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCSC[CH](NC(C)=O)C(O)=O" A1CA2 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(=CCC/C(=C/CC/C(=C/CC/C(=C/CSC[C@@H](C(=O)O)NC(=O)C)/C)/C)/C)C" A1CA2 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(=CCCC(=CCCC(=CCCC(=CCSCC(C(=O)O)NC(=O)C)C)C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CA2 "SYSTEMATIC NAME" ACDLabs 14.52 "N-acetyl-S-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-L-cysteine" A1CA2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-2-acetamido-3-[(2~{E},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]sulfanyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CA2 "Create component" 2025-05-01 RCSB A1CA2 "Initial release" 2025-09-03 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1CA2 _pdbx_chem_comp_synonyms.name "N-acetyl-S-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-L-cysteine" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type "systematic name" #