data_A1CC3 # _chem_comp.id A1CC3 _chem_comp.name "(2M,4S)-2-(2-chloropyridin-4-yl)-N-cyclohexyl-5,7-dimethylimidazo[1,2-a]pyrimidin-3-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H22 Cl N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-16 _chem_comp.pdbx_modified_date 2025-07-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 355.864 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CC3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9OO1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CC3 C18 C1 C 0 1 Y N N N N N 168.377 174.950 175.236 -2.914 -2.452 -1.747 C18 A1CC3 1 A1CC3 C20 C2 C 0 1 Y N N N N N 168.760 173.715 173.338 -3.387 -1.514 0.311 C20 A1CC3 2 A1CC3 C17 C3 C 0 1 Y N N N N N 167.020 174.684 175.184 -1.569 -2.186 -1.611 C17 A1CC3 3 A1CC3 C16 C4 C 0 1 Y N N N N N 166.532 173.890 174.157 -1.116 -1.550 -0.448 C16 A1CC3 4 A1CC3 C15 C5 C 0 1 Y N N N N N 165.180 173.595 174.051 0.319 -1.244 -0.259 C15 A1CC3 5 A1CC3 C14 C6 C 0 1 N N N N N N 164.389 172.908 178.718 0.329 2.837 0.345 C14 A1CC3 6 A1CC3 N23 N1 N 0 1 Y N N N N N 164.558 173.291 172.923 1.232 -2.052 0.317 N23 A1CC3 7 A1CC3 C13 C7 C 0 1 N N N N N N 164.659 171.679 179.580 -0.577 3.615 1.303 C13 A1CC3 8 A1CC3 C12 C8 C 0 1 N N N N N N 164.161 170.400 178.919 -1.711 4.271 0.512 C12 A1CC3 9 A1CC3 C11 C9 C 0 1 N N N N N N 164.806 170.221 177.552 -2.528 3.190 -0.199 C11 A1CC3 10 A1CC3 C10 C10 C 0 1 N N N N N N 164.548 171.431 176.663 -1.622 2.412 -1.156 C10 A1CC3 11 A1CC3 C01 C11 C 0 1 N N N N N N 159.895 172.168 171.785 5.997 -1.543 1.175 C01 A1CC3 12 A1CC3 C02 C12 C 0 1 Y N N N N N 161.006 172.549 172.751 4.663 -1.072 0.656 C02 A1CC3 13 A1CC3 C03 C13 C 0 1 Y N N N N N 160.725 172.710 174.107 4.555 0.192 0.057 C03 A1CC3 14 A1CC3 C04 C14 C 0 1 Y N N N N N 161.752 173.058 174.977 3.354 0.606 -0.411 C04 A1CC3 15 A1CC3 C05 C15 C 0 1 N N N N N N 161.412 173.229 176.456 3.211 1.959 -1.059 C05 A1CC3 16 A1CC3 C07 C16 C 0 1 Y N N N N N 164.207 173.569 175.058 0.959 -0.085 -0.646 C07 A1CC3 17 A1CC3 C09 C17 C 0 1 N N N N N N 164.949 172.755 177.307 -0.488 1.757 -0.365 C09 A1CC3 18 A1CC3 C22 C18 C 0 1 Y N N N N N 167.416 173.398 173.212 -2.059 -1.210 0.529 C22 A1CC3 19 A1CC3 C24 C19 C 0 1 Y N N N N N 163.236 173.067 173.184 2.410 -1.452 0.315 C24 A1CC3 20 A1CC3 N06 N2 N 0 1 Y N N N N N 163.013 173.230 174.461 2.270 -0.219 -0.282 N06 A1CC3 21 A1CC3 N08 N3 N 0 1 N N N N N N 164.434 173.834 176.475 0.382 1.010 -1.284 N08 A1CC3 22 A1CC3 N19 N4 N 0 1 Y N N N N N 169.202 174.468 174.327 -3.772 -2.111 -0.803 N19 A1CC3 23 A1CC3 N25 N5 N 0 1 Y N N N N N 162.244 172.728 172.319 3.611 -1.847 0.768 N25 A1CC3 24 A1CC3 CL1 CL1 CL 0 0 N N N N N N 169.923 173.092 172.136 -4.570 -1.093 1.510 CL1 A1CC3 25 A1CC3 H1 H1 H 0 1 N N N N N N 168.767 175.563 176.035 -3.273 -2.942 -2.640 H1 A1CC3 26 A1CC3 H2 H2 H 0 1 N N N N N N 166.352 175.088 175.931 -0.874 -2.464 -2.389 H2 A1CC3 27 A1CC3 H3 H3 H 0 1 N N N N N N 164.857 173.783 179.192 0.749 3.520 -0.393 H3 A1CC3 28 A1CC3 H4 H4 H 0 1 N N N N N N 163.302 173.064 178.653 1.137 2.370 0.909 H4 A1CC3 29 A1CC3 H5 H5 H 0 1 N N N N N N 165.743 171.594 179.748 -0.997 2.932 2.041 H5 A1CC3 30 A1CC3 H6 H6 H 0 1 N N N N N N 164.147 171.803 180.546 0.005 4.385 1.809 H6 A1CC3 31 A1CC3 H7 H7 H 0 1 N N N N N N 163.069 170.456 178.800 -2.356 4.825 1.194 H7 A1CC3 32 A1CC3 H8 H8 H 0 1 N N N N N N 164.417 169.540 179.556 -1.291 4.954 -0.227 H8 A1CC3 33 A1CC3 H9 H9 H 0 1 N N N N N N 164.386 169.325 177.071 -2.948 2.507 0.539 H9 A1CC3 34 A1CC3 H10 H10 H 0 1 N N N N N N 165.891 170.094 177.680 -3.336 3.657 -0.762 H10 A1CC3 35 A1CC3 H11 H11 H 0 1 N N N N N N 163.474 171.469 176.429 -2.204 1.643 -1.663 H11 A1CC3 36 A1CC3 H12 H12 H 0 1 N N N N N N 165.122 171.308 175.733 -1.202 3.095 -1.895 H12 A1CC3 37 A1CC3 H13 H13 H 0 1 N N N N N N 160.305 172.085 170.768 6.110 -1.240 2.216 H13 A1CC3 38 A1CC3 H14 H14 H 0 1 N N N N N N 159.463 171.202 172.086 6.051 -2.630 1.104 H14 A1CC3 39 A1CC3 H15 H15 H 0 1 N N N N N N 159.113 172.941 171.803 6.795 -1.100 0.579 H15 A1CC3 40 A1CC3 H16 H16 H 0 1 N N N N N N 159.721 172.566 174.477 5.424 0.828 -0.033 H16 A1CC3 41 A1CC3 H17 H17 H 0 1 N N N N N N 161.533 172.266 176.974 4.179 2.459 -1.073 H17 A1CC3 42 A1CC3 H18 H18 H 0 1 N N N N N N 162.087 173.974 176.903 2.850 1.837 -2.080 H18 A1CC3 43 A1CC3 H19 H19 H 0 1 N N N N N N 160.371 173.571 176.556 2.500 2.560 -0.492 H19 A1CC3 44 A1CC3 H20 H20 H 0 1 N N N N N N 166.047 172.811 177.352 -0.908 1.074 0.373 H20 A1CC3 45 A1CC3 H21 H21 H 0 1 N N N N N N 167.067 172.782 172.396 -1.751 -0.722 1.442 H21 A1CC3 46 A1CC3 H22 H22 H 0 1 N N N N N N 165.086 174.590 176.534 1.088 1.611 -1.682 H22 A1CC3 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CC3 C01 C02 SING N N 1 A1CC3 CL1 C20 SING N N 2 A1CC3 N25 C02 DOUB Y N 3 A1CC3 N25 C24 SING Y N 4 A1CC3 C02 C03 SING Y N 5 A1CC3 N23 C24 DOUB Y N 6 A1CC3 N23 C15 SING Y N 7 A1CC3 C24 N06 SING Y N 8 A1CC3 C22 C20 DOUB Y N 9 A1CC3 C22 C16 SING Y N 10 A1CC3 C20 N19 SING Y N 11 A1CC3 C15 C16 SING N N 12 A1CC3 C15 C07 DOUB Y N 13 A1CC3 C03 C04 DOUB Y N 14 A1CC3 C16 C17 DOUB Y N 15 A1CC3 N19 C18 DOUB Y N 16 A1CC3 N06 C04 SING Y N 17 A1CC3 N06 C07 SING Y N 18 A1CC3 C04 C05 SING N N 19 A1CC3 C07 N08 SING N N 20 A1CC3 C17 C18 SING Y N 21 A1CC3 N08 C09 SING N N 22 A1CC3 C10 C09 SING N N 23 A1CC3 C10 C11 SING N N 24 A1CC3 C09 C14 SING N N 25 A1CC3 C11 C12 SING N N 26 A1CC3 C14 C13 SING N N 27 A1CC3 C12 C13 SING N N 28 A1CC3 C18 H1 SING N N 29 A1CC3 C17 H2 SING N N 30 A1CC3 C14 H3 SING N N 31 A1CC3 C14 H4 SING N N 32 A1CC3 C13 H5 SING N N 33 A1CC3 C13 H6 SING N N 34 A1CC3 C12 H7 SING N N 35 A1CC3 C12 H8 SING N N 36 A1CC3 C11 H9 SING N N 37 A1CC3 C11 H10 SING N N 38 A1CC3 C10 H11 SING N N 39 A1CC3 C10 H12 SING N N 40 A1CC3 C01 H13 SING N N 41 A1CC3 C01 H14 SING N N 42 A1CC3 C01 H15 SING N N 43 A1CC3 C03 H16 SING N N 44 A1CC3 C05 H17 SING N N 45 A1CC3 C05 H18 SING N N 46 A1CC3 C05 H19 SING N N 47 A1CC3 C09 H20 SING N N 48 A1CC3 C22 H21 SING N N 49 A1CC3 N08 H22 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CC3 SMILES ACDLabs 14.52 "Clc1nccc(c1)c1nc2nc(C)cc(C)n2c1NC1CCCCC1" A1CC3 InChI InChI 1.06 "InChI=1S/C19H22ClN5/c1-12-10-13(2)25-18(23-15-6-4-3-5-7-15)17(24-19(25)22-12)14-8-9-21-16(20)11-14/h8-11,15,23H,3-7H2,1-2H3" A1CC3 InChIKey InChI 1.06 HERNWKUOCFEFTO-UHFFFAOYSA-N A1CC3 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(C)n2c(NC3CCCCC3)c(nc2n1)c4ccnc(Cl)c4" A1CC3 SMILES CACTVS 3.385 "Cc1cc(C)n2c(NC3CCCCC3)c(nc2n1)c4ccnc(Cl)c4" A1CC3 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(n2c(c(nc2n1)c3ccnc(c3)Cl)NC4CCCCC4)C" A1CC3 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(n2c(c(nc2n1)c3ccnc(c3)Cl)NC4CCCCC4)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CC3 "SYSTEMATIC NAME" ACDLabs 14.52 "(2M,4S)-2-(2-chloropyridin-4-yl)-N-cyclohexyl-5,7-dimethylimidazo[1,2-a]pyrimidin-3-amine" A1CC3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-(2-chloranylpyridin-4-yl)-~{N}-cyclohexyl-5,7-dimethyl-imidazo[1,2-a]pyrimidin-3-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CC3 "Create component" 2025-05-16 RCSB A1CC3 "Initial release" 2025-07-16 RCSB #