data_A1CCE # _chem_comp.id A1CCE _chem_comp.name "(4S,8aR)-7-{5-[(6R,13R,14S)-5,14-dihydro-7H-6,14-methanopyrido[3',2':4,5]imidazo[1,2-b][2,5]benzodiazocin-11-yl]pyrimidin-2-yl}hexahydroimidazo[1,5-a]pyrazin-3(2H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-12 _chem_comp.pdbx_modified_date 2025-07-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.536 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CCE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9OK6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CCE N3 N1 N 0 1 N N N N N N 23.483 15.301 17.415 -5.976 2.929 -0.449 N3 A1CCE 1 A1CCE C4 C1 C 0 1 N N N N N N 23.646 14.447 18.576 -5.277 2.243 -1.548 C4 A1CCE 2 A1CCE C5 C2 C 0 1 N N R N N N 23.044 13.123 18.097 -4.723 0.969 -0.892 C5 A1CCE 3 A1CCE C6 C3 C 0 1 N N N N N N 24.050 11.987 17.940 -5.250 -0.281 -1.602 C6 A1CCE 4 A1CCE C8 C4 C 0 1 N N N N N N 23.309 11.467 15.670 -5.762 -1.389 0.512 C8 A1CCE 5 A1CCE N12 N2 N 0 1 Y N N N N N 23.430 9.419 18.736 -2.796 -0.745 -1.030 N12 A1CCE 6 A1CCE C13 C5 C 0 1 Y N N N N N 23.155 8.161 19.090 -1.497 -0.862 -0.820 C13 A1CCE 7 A1CCE C15 C6 C 0 1 Y N N N N N 22.196 7.723 16.991 -1.965 -2.798 0.520 C15 A1CCE 8 A1CCE C17 C7 C 0 1 Y N N N N N 22.241 5.861 18.676 0.419 -2.081 0.239 C17 A1CCE 9 A1CCE C20 C8 C 0 1 Y N N N N N 21.492 3.368 19.523 3.051 -2.435 0.731 C20 A1CCE 10 A1CCE C22 C9 C 0 1 Y N N N N N 20.056 2.025 18.673 4.766 -1.300 0.067 C22 A1CCE 11 A1CCE C26 C10 C 0 1 N N S N N N 19.106 3.377 16.739 3.761 0.542 -1.285 C26 A1CCE 12 A1CCE C28 C11 C 0 1 Y N N N N N 20.460 4.161 14.765 2.490 2.296 -0.048 C28 A1CCE 13 A1CCE O1 O1 O 0 1 N N N N N N 21.815 15.477 15.846 -6.344 2.526 1.735 O1 A1CCE 14 A1CCE C2 C12 C 0 1 N N N N N N 22.538 14.826 16.595 -5.909 2.171 0.657 C2 A1CCE 15 A1CCE N7 N3 N 0 1 N N N N N N 23.506 10.974 17.031 -5.003 -1.449 -0.743 N7 A1CCE 16 A1CCE C9 C13 C 0 1 N N N N N N 22.213 12.496 15.706 -5.298 -0.183 1.344 C9 A1CCE 17 A1CCE N10 N4 N 0 1 N N N N N N 22.468 13.473 16.773 -5.329 0.989 0.457 N10 A1CCE 18 A1CCE C11 C14 C 0 1 Y N N N N N 23.079 9.762 17.480 -3.651 -1.606 -0.498 C11 A1CCE 19 A1CCE C14 C15 C 0 1 Y N N N N N 22.527 7.249 18.253 -1.030 -1.912 -0.023 C14 A1CCE 20 A1CCE N16 N5 N 0 1 Y N N N N N 22.450 8.968 16.585 -3.248 -2.614 0.263 N16 A1CCE 21 A1CCE C18 C16 C 0 1 Y N N N N N 22.923 5.265 19.748 0.832 -3.148 1.036 C18 A1CCE 22 A1CCE C19 C17 C 0 1 Y N N N N N 22.542 4.005 20.183 2.165 -3.356 1.306 C19 A1CCE 23 A1CCE N21 N6 N 0 1 Y N N N N N 20.944 2.089 19.638 4.391 -2.328 0.772 N21 A1CCE 24 A1CCE C23 C18 C 0 1 N N N N N N 19.255 0.818 18.288 6.180 -0.830 -0.179 C23 A1CCE 25 A1CCE N24 N7 N 0 1 N N R N N N 18.657 0.975 16.931 6.162 0.444 -0.886 N24 A1CCE 26 A1CCE C25 C19 C 0 1 N N N N N N 18.021 2.341 16.788 5.153 0.525 -1.942 C25 A1CCE 27 A1CCE C27 C20 C 0 1 Y N N N N N 19.923 3.100 15.495 3.714 1.715 -0.328 C27 A1CCE 28 A1CCE C29 C21 C 0 1 Y N N N N N 21.273 3.924 13.671 2.412 3.358 0.833 C29 A1CCE 29 A1CCE C30 C22 C 0 1 Y N N N N N 21.552 2.629 13.289 3.562 3.835 1.434 C30 A1CCE 30 A1CCE C31 C23 C 0 1 Y N N N N N 21.024 1.564 14.001 4.782 3.257 1.149 C31 A1CCE 31 A1CCE C32 C24 C 0 1 Y N N N N N 20.197 1.784 15.103 4.865 2.196 0.257 C32 A1CCE 32 A1CCE C33 C25 C 0 1 N N N N N N 19.517 0.607 15.753 6.224 1.630 -0.055 C33 A1CCE 33 A1CCE N34 N8 N 0 1 Y N N N N N 19.973 3.176 17.932 3.665 -0.674 -0.459 N34 A1CCE 34 A1CCE C35 C26 C 0 1 Y N N N N N 20.892 4.050 18.465 2.565 -1.368 -0.070 C35 A1CCE 35 A1CCE N36 N9 N 0 1 Y N N N N N 21.226 5.260 18.022 1.269 -1.211 -0.301 N36 A1CCE 36 A1CCE H39 H1 H 0 1 N N N N N N 24.008 16.136 17.249 -6.412 3.793 -0.513 H39 A1CCE 37 A1CCE H40 H2 H 0 1 N N N N N N 24.708 14.330 18.838 -5.975 1.991 -2.347 H40 A1CCE 38 A1CCE H41 H3 H 0 1 N N N N N N 23.096 14.844 19.442 -4.465 2.862 -1.930 H41 A1CCE 39 A1CCE H37 H4 H 0 1 N N N N N N 22.245 12.813 18.786 -3.634 0.986 -0.844 H37 A1CCE 40 A1CCE H42 H5 H 0 1 N N N N N N 24.989 12.384 17.527 -6.321 -0.178 -1.780 H42 A1CCE 41 A1CCE H43 H6 H 0 1 N N N N N N 24.245 11.531 18.922 -4.731 -0.410 -2.552 H43 A1CCE 42 A1CCE H44 H7 H 0 1 N N N N N N 24.239 11.924 15.300 -6.824 -1.288 0.289 H44 A1CCE 43 A1CCE H45 H8 H 0 1 N N N N N N 23.020 10.636 15.010 -5.596 -2.306 1.078 H45 A1CCE 44 A1CCE H48 H9 H 0 1 N N N N N N 23.436 7.836 20.081 -0.805 -0.157 -1.257 H48 A1CCE 45 A1CCE H49 H10 H 0 1 N N N N N N 21.708 7.049 16.303 -1.643 -3.622 1.140 H49 A1CCE 46 A1CCE H38 H11 H 0 1 N N N N N N 18.685 4.393 16.716 2.960 0.592 -2.022 H38 A1CCE 47 A1CCE H56 H12 H 0 1 N N N N N N 20.239 5.177 15.057 1.594 1.920 -0.519 H56 A1CCE 48 A1CCE H46 H13 H 0 1 N N N N N N 22.172 13.017 14.738 -5.973 -0.031 2.186 H46 A1CCE 49 A1CCE H47 H14 H 0 1 N N N N N N 21.251 11.996 15.894 -4.283 -0.349 1.706 H47 A1CCE 50 A1CCE H50 H15 H 0 1 N N N N N N 23.738 5.784 20.230 0.094 -3.821 1.447 H50 A1CCE 51 A1CCE H51 H16 H 0 1 N N N N N N 23.045 3.529 21.012 2.506 -4.175 1.921 H51 A1CCE 52 A1CCE H52 H17 H 0 1 N N N N N N 19.912 -0.064 18.290 6.691 -0.707 0.776 H52 A1CCE 53 A1CCE H53 H18 H 0 1 N N N N N N 18.447 0.675 19.021 6.708 -1.570 -0.779 H53 A1CCE 54 A1CCE H55 H20 H 0 1 N N N N N N 17.431 2.379 15.860 5.238 -0.341 -2.598 H55 A1CCE 55 A1CCE H54 H21 H 0 1 N N N N N N 17.364 2.535 17.648 5.297 1.439 -2.519 H54 A1CCE 56 A1CCE H57 H22 H 0 1 N N N N N N 21.689 4.753 13.117 1.457 3.814 1.051 H57 A1CCE 57 A1CCE H58 H23 H 0 1 N N N N N N 22.184 2.444 12.433 3.505 4.660 2.129 H58 A1CCE 58 A1CCE H59 H24 H 0 1 N N N N N N 21.255 0.553 13.700 5.678 3.631 1.622 H59 A1CCE 59 A1CCE H60 H25 H 0 1 N N N N N N 20.292 -0.095 16.095 6.722 1.379 0.881 H60 A1CCE 60 A1CCE H61 H26 H 0 1 N N N N N N 18.883 0.115 15.001 6.811 2.391 -0.570 H61 A1CCE 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CCE O1 C2 DOUB N N 1 A1CCE C2 N10 SING N N 2 A1CCE C2 N3 SING N N 3 A1CCE N3 C4 SING N N 4 A1CCE C4 C5 SING N N 5 A1CCE C5 N10 SING N N 6 A1CCE C5 C6 SING N N 7 A1CCE C6 N7 SING N N 8 A1CCE N7 C8 SING N N 9 A1CCE N7 C11 SING N N 10 A1CCE C8 C9 SING N N 11 A1CCE C9 N10 SING N N 12 A1CCE C11 N16 DOUB Y N 13 A1CCE C11 N12 SING Y N 14 A1CCE N12 C13 DOUB Y N 15 A1CCE C13 C14 SING Y N 16 A1CCE C14 C15 DOUB Y N 17 A1CCE C14 C17 SING N N 18 A1CCE C15 N16 SING Y N 19 A1CCE C17 N36 SING Y N 20 A1CCE C17 C18 DOUB Y N 21 A1CCE C18 C19 SING Y N 22 A1CCE C19 C20 DOUB Y N 23 A1CCE C20 C35 SING Y N 24 A1CCE C20 N21 SING Y N 25 A1CCE N21 C22 DOUB Y N 26 A1CCE C22 N34 SING Y N 27 A1CCE C22 C23 SING N N 28 A1CCE C23 N24 SING N N 29 A1CCE N24 C33 SING N N 30 A1CCE N24 C25 SING N N 31 A1CCE C25 C26 SING N N 32 A1CCE C26 C27 SING N N 33 A1CCE C26 N34 SING N N 34 A1CCE C27 C32 SING Y N 35 A1CCE C27 C28 DOUB Y N 36 A1CCE C28 C29 SING Y N 37 A1CCE C29 C30 DOUB Y N 38 A1CCE C30 C31 SING Y N 39 A1CCE C31 C32 DOUB Y N 40 A1CCE C32 C33 SING N N 41 A1CCE N34 C35 SING Y N 42 A1CCE C35 N36 DOUB Y N 43 A1CCE N3 H39 SING N N 44 A1CCE C4 H40 SING N N 45 A1CCE C4 H41 SING N N 46 A1CCE C5 H37 SING N N 47 A1CCE C6 H42 SING N N 48 A1CCE C6 H43 SING N N 49 A1CCE C8 H44 SING N N 50 A1CCE C8 H45 SING N N 51 A1CCE C13 H48 SING N N 52 A1CCE C15 H49 SING N N 53 A1CCE C26 H38 SING N N 54 A1CCE C28 H56 SING N N 55 A1CCE C9 H46 SING N N 56 A1CCE C9 H47 SING N N 57 A1CCE C18 H50 SING N N 58 A1CCE C19 H51 SING N N 59 A1CCE C23 H52 SING N N 60 A1CCE C23 H53 SING N N 61 A1CCE C25 H55 SING N N 62 A1CCE C25 H54 SING N N 63 A1CCE C29 H57 SING N N 64 A1CCE C30 H58 SING N N 65 A1CCE C31 H59 SING N N 66 A1CCE C33 H60 SING N N 67 A1CCE C33 H61 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CCE SMILES ACDLabs 14.52 "O=C1NCC2CN(CCN12)c1ncc(cn1)c1nc2c(nc3CN4CC(n23)c2ccccc2C4)cc1" A1CCE InChI InChI 1.06 "InChI=1S/C26H25N9O/c36-26-29-11-18-13-33(7-8-34(18)26)25-27-9-17(10-28-25)20-5-6-21-24(31-20)35-22-14-32(15-23(35)30-21)12-16-3-1-2-4-19(16)22/h1-6,9-10,18,22H,7-8,11-15H2,(H,29,36)/t18-,22-/m1/s1" A1CCE InChIKey InChI 1.06 TZMGRZLRBINAAJ-XMSQKQJNSA-N A1CCE SMILES_CANONICAL CACTVS 3.385 "O=C1NC[C@@H]2CN(CCN12)c3ncc(cn3)c4ccc5nc6C[N@]7C[C@@H](n6c5n4)c8ccccc8C7" A1CCE SMILES CACTVS 3.385 "O=C1NC[CH]2CN(CCN12)c3ncc(cn3)c4ccc5nc6C[N]7C[CH](n6c5n4)c8ccccc8C7" A1CCE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C[N@]3Cc4nc5ccc(nc5n4[C@@H]2C3)c6cnc(nc6)N7CCN8[C@@H](C7)CNC8=O" A1CCE SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)CN3Cc4nc5ccc(nc5n4C2C3)c6cnc(nc6)N7CCN8C(C7)CNC8=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CCE "SYSTEMATIC NAME" ACDLabs 14.52 "(4S,8aR)-7-{5-[(6R,13R,14S)-5,14-dihydro-7H-6,14-methanopyrido[3',2':4,5]imidazo[1,2-b][2,5]benzodiazocin-11-yl]pyrimidin-2-yl}hexahydroimidazo[1,5-a]pyrazin-3(2H)-one" A1CCE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(8~{a}~{R})-7-[5-[(1~{S},12~{R})-2,4,9,12-tetrazapentacyclo[10.7.1.0^{2,10}.0^{3,8}.0^{14,19}]icosa-3,5,7,9,14,16,18-heptaen-5-yl]pyrimidin-2-yl]-1,2,5,6,8,8~{a}-hexahydroimidazo[1,5-a]pyrazin-3-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CCE "Create component" 2025-05-12 RCSB A1CCE "Initial release" 2025-07-23 RCSB #