data_A1CH3 # _chem_comp.id A1CH3 _chem_comp.name "6-[(4R,5S,6S)-6-hydroxy-6,7,8,9-tetrahydro-5H-imidazo[1,5-a]azepin-5-yl][1,1'-biphenyl]-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H19 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-09 _chem_comp.pdbx_modified_date 2025-11-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 329.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CH3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9PH4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CH3 C1 C1 C 0 1 Y N N N N N 157.999 123.593 123.741 -1.856 -1.268 0.857 C1 A1CH3 1 A1CH3 C3 C2 C 0 1 Y N N N N N 158.859 124.691 121.992 -2.216 0.214 -0.708 C3 A1CH3 2 A1CH3 C11 C3 C 0 1 Y N N N N N 160.459 122.727 118.405 1.926 1.652 0.156 C11 A1CH3 3 A1CH3 C12 C4 C 0 1 Y N N N N N 159.313 122.690 119.172 0.825 0.896 -0.231 C12 A1CH3 4 A1CH3 C13 C5 C 0 1 Y N N N N N 157.988 122.830 118.433 -0.531 1.500 -0.222 C13 A1CH3 5 A1CH3 C14 C6 C 0 1 N N N N N N 162.937 122.649 118.096 4.337 1.850 0.541 C14 A1CH3 6 A1CH3 C16 C7 C 0 1 Y N N N N N 157.567 124.076 118.012 -1.278 1.523 0.954 C16 A1CH3 7 A1CH3 C17 C8 C 0 1 Y N N N N N 156.370 124.199 117.331 -2.538 2.086 0.957 C17 A1CH3 8 A1CH3 C18 C9 C 0 1 Y N N N N N 155.602 123.079 117.063 -3.060 2.625 -0.205 C18 A1CH3 9 A1CH3 C19 C10 C 0 1 Y N N N N N 156.031 121.832 117.479 -2.323 2.604 -1.375 C19 A1CH3 10 A1CH3 C20 C11 C 0 1 Y N N N N N 157.228 121.705 118.158 -1.059 2.050 -1.388 C20 A1CH3 11 A1CH3 C21 C12 C 0 1 N N N N N N 157.322 122.418 124.483 -1.251 -2.405 1.637 C21 A1CH3 12 A1CH3 C22 C13 C 0 1 N N N N N N 156.092 121.971 123.727 0.263 -2.195 1.734 C22 A1CH3 13 A1CH3 C23 C14 C 0 1 N N N N N N 156.363 120.989 122.613 0.943 -2.828 0.524 C23 A1CH3 14 A1CH3 C24 C15 C 0 1 N N S N N N 157.694 121.095 121.880 0.051 -2.721 -0.711 C24 A1CH3 15 A1CH3 N2 N1 N 0 1 Y N N N N N 158.290 123.538 122.460 -1.388 -0.781 -0.333 N2 A1CH3 16 A1CH3 N4 N2 N 0 1 Y N N N N N 158.948 125.491 123.085 -3.140 0.355 0.204 N4 A1CH3 17 A1CH3 C5 C16 C 0 1 Y N N N N N 158.426 124.850 124.154 -2.943 -0.547 1.179 C5 A1CH3 18 A1CH3 C6 C17 C 0 1 N N S N N N 158.090 122.491 121.383 -0.197 -1.249 -1.047 C6 A1CH3 19 A1CH3 C7 C18 C 0 1 Y N N N N N 159.390 122.542 120.554 0.996 -0.429 -0.628 C7 A1CH3 20 A1CH3 C8 C19 C 0 1 Y N N N N N 160.644 122.400 121.137 2.257 -0.994 -0.638 C8 A1CH3 21 A1CH3 C9 C20 C 0 1 Y N N N N N 161.795 122.446 120.361 3.355 -0.251 -0.255 C9 A1CH3 22 A1CH3 C10 C21 C 0 1 Y N N N N N 161.699 122.604 118.989 3.197 1.079 0.145 C10 A1CH3 23 A1CH3 N15 N3 N 0 1 N N N N N N 163.840 122.687 117.417 5.241 2.462 0.855 N15 A1CH3 24 A1CH3 O25 O1 O 0 1 N N N N N N 158.736 120.557 122.651 0.693 -3.359 -1.817 O25 A1CH3 25 A1CH3 H1 H1 H 0 1 N N N N N N 159.168 124.914 120.981 -2.129 0.799 -1.612 H1 A1CH3 26 A1CH3 H2 H2 H 0 1 N N N N N N 160.382 122.854 117.335 1.798 2.681 0.460 H2 A1CH3 27 A1CH3 H3 H3 H 0 1 N N N N N N 158.169 124.949 118.214 -0.872 1.101 1.862 H3 A1CH3 28 A1CH3 H4 H4 H 0 1 N N N N N N 156.033 125.173 117.007 -3.118 2.104 1.868 H4 A1CH3 29 A1CH3 H5 H5 H 0 1 N N N N N N 154.668 123.179 116.529 -4.047 3.064 -0.198 H5 A1CH3 30 A1CH3 H6 H6 H 0 1 N N N N N N 155.431 120.958 117.273 -2.736 3.027 -2.280 H6 A1CH3 31 A1CH3 H7 H7 H 0 1 N N N N N N 157.570 120.730 118.474 -0.484 2.034 -2.302 H7 A1CH3 32 A1CH3 H8 H8 H 0 1 N N N N N N 157.031 122.744 125.493 -1.680 -2.430 2.639 H8 A1CH3 33 A1CH3 H9 H9 H 0 1 N N N N N N 158.029 121.579 124.558 -1.458 -3.347 1.129 H9 A1CH3 34 A1CH3 H10 H10 H 0 1 N N N N N N 155.614 122.861 123.291 0.481 -1.127 1.755 H10 A1CH3 35 A1CH3 H11 H11 H 0 1 N N N N N N 155.403 121.498 124.442 0.638 -2.661 2.645 H11 A1CH3 36 A1CH3 H12 H12 H 0 1 N N N N N N 155.566 121.113 121.865 1.886 -2.315 0.332 H12 A1CH3 37 A1CH3 H13 H13 H 0 1 N N N N N N 156.306 119.979 123.045 1.142 -3.879 0.733 H13 A1CH3 38 A1CH3 H14 H14 H 0 1 N N N N N N 157.595 120.471 120.979 -0.902 -3.212 -0.514 H14 A1CH3 39 A1CH3 H15 H15 H 0 1 N N N N N N 158.353 125.246 125.156 -3.550 -0.672 2.063 H15 A1CH3 40 A1CH3 H16 H16 H 0 1 N N N N N N 157.278 122.844 120.730 -0.353 -1.142 -2.121 H16 A1CH3 41 A1CH3 H17 H17 H 0 1 N N N N N N 160.724 122.252 122.204 2.384 -2.021 -0.947 H17 A1CH3 42 A1CH3 H18 H18 H 0 1 N N N N N N 162.765 122.359 120.828 4.339 -0.697 -0.265 H18 A1CH3 43 A1CH3 H19 H19 H 0 1 N N N N N N 158.489 119.692 122.958 0.877 -4.298 -1.678 H19 A1CH3 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CH3 C18 C17 DOUB Y N 1 A1CH3 C18 C19 SING Y N 2 A1CH3 C17 C16 SING Y N 3 A1CH3 N15 C14 TRIP N N 4 A1CH3 C19 C20 DOUB Y N 5 A1CH3 C16 C13 DOUB Y N 6 A1CH3 C14 C10 SING N N 7 A1CH3 C20 C13 SING Y N 8 A1CH3 C11 C10 DOUB Y N 9 A1CH3 C11 C12 SING Y N 10 A1CH3 C13 C12 SING N N 11 A1CH3 C10 C9 SING Y N 12 A1CH3 C12 C7 DOUB Y N 13 A1CH3 C9 C8 DOUB Y N 14 A1CH3 C7 C8 SING Y N 15 A1CH3 C7 C6 SING N N 16 A1CH3 C6 C24 SING N N 17 A1CH3 C6 N2 SING N N 18 A1CH3 C24 C23 SING N N 19 A1CH3 C24 O25 SING N N 20 A1CH3 C3 N2 SING Y N 21 A1CH3 C3 N4 DOUB Y N 22 A1CH3 N2 C1 SING Y N 23 A1CH3 C23 C22 SING N N 24 A1CH3 N4 C5 SING Y N 25 A1CH3 C22 C21 SING N N 26 A1CH3 C1 C5 DOUB Y N 27 A1CH3 C1 C21 SING N N 28 A1CH3 C3 H1 SING N N 29 A1CH3 C11 H2 SING N N 30 A1CH3 C16 H3 SING N N 31 A1CH3 C17 H4 SING N N 32 A1CH3 C18 H5 SING N N 33 A1CH3 C19 H6 SING N N 34 A1CH3 C20 H7 SING N N 35 A1CH3 C21 H8 SING N N 36 A1CH3 C21 H9 SING N N 37 A1CH3 C22 H10 SING N N 38 A1CH3 C22 H11 SING N N 39 A1CH3 C23 H12 SING N N 40 A1CH3 C23 H13 SING N N 41 A1CH3 C24 H14 SING N N 42 A1CH3 C5 H15 SING N N 43 A1CH3 C6 H16 SING N N 44 A1CH3 C8 H17 SING N N 45 A1CH3 C9 H18 SING N N 46 A1CH3 O25 H19 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CH3 SMILES ACDLabs 14.52 "N#Cc1ccc(C2C(O)CCCc3cncn32)c(c1)c1ccccc1" A1CH3 InChI InChI 1.06 "InChI=1S/C21H19N3O/c22-12-15-9-10-18(19(11-15)16-5-2-1-3-6-16)21-20(25)8-4-7-17-13-23-14-24(17)21/h1-3,5-6,9-11,13-14,20-21,25H,4,7-8H2/t20-,21-/m0/s1" A1CH3 InChIKey InChI 1.06 YJXOYLFTOJVXJZ-SFTDATJTSA-N A1CH3 SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CCCc2cncn2[C@H]1c3ccc(cc3c4ccccc4)C#N" A1CH3 SMILES CACTVS 3.385 "O[CH]1CCCc2cncn2[CH]1c3ccc(cc3c4ccccc4)C#N" A1CH3 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2cc(ccc2[C@H]3[C@H](CCCc4n3cnc4)O)C#N" A1CH3 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)c2cc(ccc2C3C(CCCc4n3cnc4)O)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CH3 "SYSTEMATIC NAME" ACDLabs 14.52 "6-[(4R,5S,6S)-6-hydroxy-6,7,8,9-tetrahydro-5H-imidazo[1,5-a]azepin-5-yl][1,1'-biphenyl]-3-carbonitrile" A1CH3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(5~{S},6~{S})-6-oxidanyl-6,7,8,9-tetrahydro-5~{H}-imidazo[1,5-a]azepin-5-yl]-3-phenyl-benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CH3 "Create component" 2025-07-09 RCSB A1CH3 "Initial release" 2025-12-03 RCSB #