data_A1CKD # _chem_comp.id A1CKD _chem_comp.name "(3R)-3-(2-fluorophenyl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 F N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-24 _chem_comp.pdbx_modified_date 2025-09-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.298 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CKD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7IJG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CKD N2 N1 N 0 1 Y N N N N N -44.884 -29.098 5.404 -2.242 0.846 -1.411 N2 A1CKD 1 A1CKD C3 C1 C 0 1 N N R N N N -44.874 -29.659 1.352 1.739 0.544 0.189 C3 A1CKD 2 A1CKD C6 C2 C 0 1 Y N N N N N -44.827 -29.124 6.731 -3.462 0.974 -1.892 C6 A1CKD 3 A1CKD C9 C3 C 0 1 Y N N N N N -48.680 -28.747 5.389 -3.278 -1.267 1.542 C9 A1CKD 4 A1CKD C12 C4 C 0 1 Y N N N N N -43.464 -27.586 0.869 2.060 -1.354 -1.410 C12 A1CKD 5 A1CKD C14 C5 C 0 1 Y N N N N N -44.319 -25.802 -0.553 3.701 -3.054 -1.020 C14 A1CKD 6 A1CKD C1 C6 C 0 1 N N N N N N -43.863 -31.774 2.318 1.928 3.016 0.254 C1 A1CKD 7 A1CKD C10 C7 C 0 1 Y N N N N N -49.252 -28.691 6.642 -4.593 -1.537 1.640 C10 A1CKD 8 A1CKD C11 C8 C 0 1 Y N N N N N -44.637 -28.338 0.657 2.432 -0.724 -0.238 C11 A1CKD 9 A1CKD C13 C9 C 0 1 Y N N N N N -43.299 -26.338 0.252 2.692 -2.520 -1.800 C13 A1CKD 10 A1CKD C15 C10 C 0 1 Y N N N N N -45.503 -26.522 -0.742 4.079 -2.423 0.150 C15 A1CKD 11 A1CKD C16 C11 C 0 1 Y N N N N N -45.653 -27.783 -0.146 3.442 -1.258 0.544 C16 A1CKD 12 A1CKD C2 C12 C 0 1 N N N N N N -43.817 -30.751 1.159 2.546 1.753 -0.288 C2 A1CKD 13 A1CKD C4 C13 C 0 1 N N N N N N -46.183 -29.004 3.329 -0.638 0.007 0.237 C4 A1CKD 14 A1CKD C5 C14 C 0 1 Y N N N N N -46.087 -28.956 4.807 -2.011 0.148 -0.301 C5 A1CKD 15 A1CKD C7 C15 C 0 1 Y N N N N N -47.041 -28.899 6.978 -4.393 -0.283 -0.209 C7 A1CKD 16 A1CKD C8 C16 C 0 1 Y N N N N N -47.262 -28.867 5.587 -3.102 -0.450 0.347 C8 A1CKD 17 A1CKD F1 F1 F 0 1 N N N N N N -46.792 -28.477 -0.366 3.811 -0.639 1.687 F1 A1CKD 18 A1CKD N1 N2 N 0 1 N N N N N N -45.038 -29.429 2.773 0.398 0.590 -0.399 N1 A1CKD 19 A1CKD N3 N3 N 0 1 Y N N N N N -45.845 -29.022 7.579 -4.517 0.431 -1.319 N3 A1CKD 20 A1CKD N4 N4 N 0 1 Y N N N N N -48.256 -28.792 7.595 -5.268 -0.956 0.602 N4 A1CKD 21 A1CKD O1 O1 O 0 1 N N N N N N -43.122 -31.547 3.304 2.405 4.212 -0.125 O1 A1CKD 22 A1CKD O2 O2 O 0 1 N N N N N N -47.214 -28.694 2.725 -0.445 -0.633 1.251 O2 A1CKD 23 A1CKD O3 O3 O 0 1 N N N N N N -44.627 -32.768 2.224 1.003 2.952 1.028 O3 A1CKD 24 A1CKD H3 H1 H 0 1 N N N N N N -45.822 -30.062 0.965 1.659 0.566 1.276 H3 A1CKD 25 A1CKD H5 H2 H 0 1 N N N N N N -43.846 -29.241 7.168 -3.603 1.549 -2.795 H5 A1CKD 26 A1CKD H6 H3 H 0 1 N N N N N N -49.198 -28.708 4.442 -2.502 -1.593 2.218 H6 A1CKD 27 A1CKD H9 H4 H 0 1 N N N N N N -42.687 -27.974 1.511 1.271 -0.938 -2.020 H9 A1CKD 28 A1CKD H11 H5 H 0 1 N N N N N N -44.189 -24.839 -1.023 4.195 -3.965 -1.325 H11 A1CKD 29 A1CKD H7 H6 H 0 1 N N N N N N -50.307 -28.585 6.846 -5.047 -2.126 2.423 H7 A1CKD 30 A1CKD H10 H7 H 0 1 N N N N N N -42.383 -25.785 0.396 2.398 -3.014 -2.714 H10 A1CKD 31 A1CKD H12 H8 H 0 1 N N N N N N -46.299 -26.109 -1.344 4.867 -2.840 0.759 H12 A1CKD 32 A1CKD H2 H9 H 0 1 N N N N N N -44.008 -31.273 0.210 3.572 1.668 0.071 H2 A1CKD 33 A1CKD H1 H10 H 0 1 N N N N N N -42.820 -30.286 1.128 2.544 1.785 -1.377 H1 A1CKD 34 A1CKD H4 H11 H 0 1 N N N N N N -44.255 -29.596 3.372 0.256 1.039 -1.247 H4 A1CKD 35 A1CKD H8 H12 H 0 1 N N N N N N -48.402 -28.787 8.584 -6.227 -1.012 0.461 H8 A1CKD 36 A1CKD H13 H13 H 0 1 N N N N N N -43.233 -32.235 3.950 1.975 4.994 0.249 H13 A1CKD 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CKD C15 C14 DOUB Y N 1 A1CKD C15 C16 SING Y N 2 A1CKD C14 C13 SING Y N 3 A1CKD F1 C16 SING N N 4 A1CKD C16 C11 DOUB Y N 5 A1CKD C13 C12 DOUB Y N 6 A1CKD C11 C12 SING Y N 7 A1CKD C11 C3 SING N N 8 A1CKD C2 C3 SING N N 9 A1CKD C2 C1 SING N N 10 A1CKD C3 N1 SING N N 11 A1CKD O3 C1 DOUB N N 12 A1CKD C1 O1 SING N N 13 A1CKD O2 C4 DOUB N N 14 A1CKD N1 C4 SING N N 15 A1CKD C4 C5 SING N N 16 A1CKD C5 N2 DOUB Y N 17 A1CKD C5 C8 SING Y N 18 A1CKD C9 C8 SING Y N 19 A1CKD C9 C10 DOUB Y N 20 A1CKD N2 C6 SING Y N 21 A1CKD C8 C7 DOUB Y N 22 A1CKD C10 N4 SING Y N 23 A1CKD C6 N3 DOUB Y N 24 A1CKD C7 N3 SING Y N 25 A1CKD C7 N4 SING Y N 26 A1CKD C3 H3 SING N N 27 A1CKD C6 H5 SING N N 28 A1CKD C9 H6 SING N N 29 A1CKD C12 H9 SING N N 30 A1CKD C14 H11 SING N N 31 A1CKD C10 H7 SING N N 32 A1CKD C13 H10 SING N N 33 A1CKD C15 H12 SING N N 34 A1CKD C2 H2 SING N N 35 A1CKD C2 H1 SING N N 36 A1CKD N1 H4 SING N N 37 A1CKD N4 H8 SING N N 38 A1CKD O1 H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CKD SMILES ACDLabs 14.52 "Fc1ccccc1C(CC(=O)O)NC(=O)c1ncnc2[NH]ccc12" A1CKD InChI InChI 1.06 "InChI=1S/C16H13FN4O3/c17-11-4-2-1-3-9(11)12(7-13(22)23)21-16(24)14-10-5-6-18-15(10)20-8-19-14/h1-6,8,12H,7H2,(H,21,24)(H,22,23)(H,18,19,20)/t12-/m1/s1" A1CKD InChIKey InChI 1.06 PNKDDNMYCPKPMN-GFCCVEGCSA-N A1CKD SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@@H](NC(=O)c1ncnc2[nH]ccc12)c3ccccc3F" A1CKD SMILES CACTVS 3.385 "OC(=O)C[CH](NC(=O)c1ncnc2[nH]ccc12)c3ccccc3F" A1CKD SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(c(c1)[C@@H](CC(=O)O)NC(=O)c2c3cc[nH]c3ncn2)F" A1CKD SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(c(c1)C(CC(=O)O)NC(=O)c2c3cc[nH]c3ncn2)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CKD "SYSTEMATIC NAME" ACDLabs 14.52 "(3R)-3-(2-fluorophenyl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" A1CKD "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R})-3-(2-fluorophenyl)-3-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylcarbonylamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CKD "Create component" 2025-07-24 RCSB A1CKD "Initial release" 2025-09-17 RCSB #