data_A1CKN # _chem_comp.id A1CKN _chem_comp.name "(2R)-6-[(4-chlorophenyl)sulfanyl]-2-[(4-methylphenyl)sulfanyl]hexanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 Cl O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-25 _chem_comp.pdbx_modified_date 2025-08-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 380.952 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CKN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FYL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CKN C10 C1 C 0 1 Y N N N N N 1.802 4.978 19.202 -6.520 -2.490 -0.284 C10 A1CKN 1 A1CKN C11 C2 C 0 1 N N N N N N 7.757 8.747 17.718 -0.377 1.138 -0.209 C11 A1CKN 2 A1CKN O12 O1 O 0 1 N N N N N N 6.585 5.892 14.474 -4.782 2.195 -1.359 O12 A1CKN 3 A1CKN C15 C3 C 0 1 N N N N N N 8.167 8.284 19.094 0.909 1.944 -0.019 C15 A1CKN 4 A1CKN C16 C4 C 0 1 N N N N N N 8.374 9.379 20.145 2.114 1.003 -0.080 C16 A1CKN 5 A1CKN C18 C5 C 0 1 Y N N N N N 6.159 8.722 21.602 4.897 0.728 0.047 C18 A1CKN 6 A1CKN C19 C6 C 0 1 Y N N N N N 6.845 8.209 22.702 6.233 1.086 0.177 C19 A1CKN 7 A1CKN C20 C7 C 0 1 Y N N N N N 4.958 8.143 21.154 4.553 -0.603 -0.155 C20 A1CKN 8 A1CKN C21 C8 C 0 1 Y N N N N N 6.207 7.171 23.395 7.216 0.118 0.105 C21 A1CKN 9 A1CKN C22 C9 C 0 1 Y N N N N N 4.363 7.089 21.833 5.540 -1.566 -0.227 C22 A1CKN 10 A1CKN C23 C10 C 0 1 Y N N N N N 5.002 6.615 22.965 6.871 -1.207 -0.097 C23 A1CKN 11 A1CKN C1 C11 C 0 1 Y N N N N N 3.813 6.514 17.846 -4.418 -0.888 0.535 C1 A1CKN 12 A1CKN S2 S1 S 0 1 N N N N N N 4.954 7.581 17.011 -3.079 0.133 1.056 S2 A1CKN 13 A1CKN C3 C12 C 0 1 Y N N N N N 2.493 6.905 17.888 -4.964 -1.821 1.408 C3 A1CKN 14 A1CKN C4 C13 C 0 1 Y N N N N N 4.162 5.324 18.475 -4.927 -0.765 -0.752 C4 A1CKN 15 A1CKN C5 C14 C 0 1 N N R N N N 6.500 6.708 16.813 -2.869 1.273 -0.339 C5 A1CKN 16 A1CKN C6 C15 C 0 1 Y N N N N N 1.498 6.173 18.564 -6.013 -2.619 0.996 C6 A1CKN 17 A1CKN C7 C16 C 0 1 Y N N N N N 3.141 4.578 19.128 -5.976 -1.566 -1.158 C7 A1CKN 18 A1CKN C8 C17 C 0 1 N N N N N N 7.620 7.695 16.614 -1.582 2.079 -0.148 C8 A1CKN 19 A1CKN C9 C18 C 0 1 N N N N N N 6.378 5.674 15.696 -4.045 2.213 -0.401 C9 A1CKN 20 A1CKN O13 O2 O 0 1 N N N N N N 6.041 4.521 15.993 -4.275 3.069 0.606 O13 A1CKN 21 A1CKN C14 C19 C 0 1 N N N N N N 0.768 4.181 19.906 -7.665 -3.363 -0.730 C14 A1CKN 22 A1CKN S17 S2 S 0 1 N N N N N N 6.819 10.059 20.662 3.640 1.959 0.146 S17 A1CKN 23 A1CKN CL24 CL1 CL 0 0 N N N N N N 4.295 5.338 23.882 8.109 -2.420 -0.188 CL24 A1CKN 24 A1CKN H1 H1 H 0 1 N N N N N N 8.508 9.477 17.382 -0.354 0.640 -1.179 H1 A1CKN 25 A1CKN H2 H2 H 0 1 N N N N N N 7.385 7.606 19.466 0.991 2.691 -0.809 H2 A1CKN 26 A1CKN H3 H3 H 0 1 N N N N N N 8.887 8.949 21.018 2.033 0.257 0.710 H3 A1CKN 27 A1CKN H4 H4 H 0 1 N N N N N N 8.992 10.180 19.714 2.138 0.505 -1.049 H4 A1CKN 28 A1CKN H5 H5 H 0 1 N N N N N N 7.810 8.589 23.002 6.503 2.120 0.334 H5 A1CKN 29 A1CKN H6 H6 H 0 1 N N N N N N 4.488 8.528 20.261 3.515 -0.884 -0.257 H6 A1CKN 30 A1CKN H7 H7 H 0 1 N N N N N N 6.665 6.788 24.295 8.254 0.396 0.206 H7 A1CKN 31 A1CKN H8 H8 H 0 1 N N N N N N 3.435 6.655 21.490 5.274 -2.601 -0.384 H8 A1CKN 32 A1CKN H9 H9 H 0 1 N N N N N N 2.208 7.814 17.379 -4.571 -1.919 2.409 H9 A1CKN 33 A1CKN H10 H10 H 0 1 N N N N N N 5.184 4.974 18.468 -4.505 -0.041 -1.434 H10 A1CKN 34 A1CKN H11 H11 H 0 1 N N N N N N 6.664 6.176 17.762 -2.807 0.705 -1.267 H11 A1CKN 35 A1CKN H12 H12 H 0 1 N N N N N N 0.485 6.546 18.586 -6.438 -3.344 1.675 H12 A1CKN 36 A1CKN H13 H13 H 0 1 N N N N N N 3.417 3.645 19.596 -6.372 -1.472 -2.158 H13 A1CKN 37 A1CKN H14 H14 H 0 1 N N N N N N 8.564 7.133 16.558 -1.605 2.577 0.821 H14 A1CKN 38 A1CKN H15 H15 H 0 1 N N N N N N 7.448 8.219 15.662 -1.501 2.825 -0.939 H15 A1CKN 39 A1CKN H16 H16 H 0 1 N N N N N N 5.999 3.990 15.206 -5.041 3.652 0.521 H16 A1CKN 40 A1CKN H17 H17 H 0 1 N N N N N N 0.312 3.468 19.203 -8.609 -2.869 -0.502 H17 A1CKN 41 A1CKN H18 H18 H 0 1 N N N N N N 1.233 3.630 20.737 -7.594 -3.534 -1.804 H18 A1CKN 42 A1CKN H19 H19 H 0 1 N N N N N N -0.008 4.854 20.300 -7.619 -4.318 -0.206 H19 A1CKN 43 A1CKN H20 H20 H 0 1 N N N N N N 6.781 9.244 17.818 -0.459 0.392 0.581 H20 A1CKN 44 A1CKN H21 H21 H 0 1 N N N N N N 9.113 7.732 18.994 0.886 2.443 0.950 H21 A1CKN 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CKN O12 C9 DOUB N N 1 A1CKN C9 O13 SING N N 2 A1CKN C9 C5 SING N N 3 A1CKN C8 C5 SING N N 4 A1CKN C8 C11 SING N N 5 A1CKN C5 S2 SING N N 6 A1CKN S2 C1 SING N N 7 A1CKN C11 C15 SING N N 8 A1CKN C1 C3 DOUB Y N 9 A1CKN C1 C4 SING Y N 10 A1CKN C3 C6 SING Y N 11 A1CKN C4 C7 DOUB Y N 12 A1CKN C6 C10 DOUB Y N 13 A1CKN C15 C16 SING N N 14 A1CKN C7 C10 SING Y N 15 A1CKN C10 C14 SING N N 16 A1CKN C16 S17 SING N N 17 A1CKN S17 C18 SING N N 18 A1CKN C20 C18 DOUB Y N 19 A1CKN C20 C22 SING Y N 20 A1CKN C18 C19 SING Y N 21 A1CKN C22 C23 DOUB Y N 22 A1CKN C19 C21 DOUB Y N 23 A1CKN C23 C21 SING Y N 24 A1CKN C23 CL24 SING N N 25 A1CKN C11 H1 SING N N 26 A1CKN C15 H2 SING N N 27 A1CKN C16 H3 SING N N 28 A1CKN C16 H4 SING N N 29 A1CKN C19 H5 SING N N 30 A1CKN C20 H6 SING N N 31 A1CKN C21 H7 SING N N 32 A1CKN C22 H8 SING N N 33 A1CKN C3 H9 SING N N 34 A1CKN C4 H10 SING N N 35 A1CKN C5 H11 SING N N 36 A1CKN C6 H12 SING N N 37 A1CKN C7 H13 SING N N 38 A1CKN C8 H14 SING N N 39 A1CKN C8 H15 SING N N 40 A1CKN O13 H16 SING N N 41 A1CKN C14 H17 SING N N 42 A1CKN C14 H18 SING N N 43 A1CKN C14 H19 SING N N 44 A1CKN C11 H20 SING N N 45 A1CKN C15 H21 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CKN SMILES ACDLabs 14.52 "Clc1ccc(SCCCCC(Sc2ccc(C)cc2)C(=O)O)cc1" A1CKN InChI InChI 1.06 "InChI=1S/C19H21ClO2S2/c1-14-5-9-17(10-6-14)24-18(19(21)22)4-2-3-13-23-16-11-7-15(20)8-12-16/h5-12,18H,2-4,13H2,1H3,(H,21,22)/t18-/m1/s1" A1CKN InChIKey InChI 1.06 HVFVCYLTDOVLAM-GOSISDBHSA-N A1CKN SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(S[C@H](CCCCSc2ccc(Cl)cc2)C(O)=O)cc1" A1CKN SMILES CACTVS 3.385 "Cc1ccc(S[CH](CCCCSc2ccc(Cl)cc2)C(O)=O)cc1" A1CKN SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(cc1)S[C@H](CCCCSc2ccc(cc2)Cl)C(=O)O" A1CKN SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(cc1)SC(CCCCSc2ccc(cc2)Cl)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CKN "SYSTEMATIC NAME" ACDLabs 14.52 "(2R)-6-[(4-chlorophenyl)sulfanyl]-2-[(4-methylphenyl)sulfanyl]hexanoic acid" A1CKN "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-6-(4-chlorophenyl)sulfanyl-2-(4-methylphenyl)sulfanyl-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CKN "Create component" 2025-07-25 RCSB A1CKN "Initial release" 2025-08-06 RCSB #