data_A1CLP # _chem_comp.id A1CLP _chem_comp.name "(7M)-8-methyl-1'-{[6-(4-methylpiperazin-1-yl)pyridin-2-yl]methyl}-7-(2-methylpyridin-4-yl)-3,4-dihydrospiro[[1]benzopyran-2,4'-piperidine]" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H39 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-04 _chem_comp.pdbx_modified_date 2026-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 497.674 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CLP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9PV9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CLP C10 C1 C 0 1 N N N N N N 4.120 42.990 -17.188 0.690 3.306 0.354 C10 A1CLP 1 A1CLP C15 C2 C 0 1 Y N N N N N 4.183 38.839 -19.727 -3.875 1.463 -1.207 C15 A1CLP 2 A1CLP C17 C3 C 0 1 Y N N N N N 4.961 37.994 -21.872 -6.133 1.634 -0.442 C17 A1CLP 3 A1CLP C21 C4 C 0 1 N N N N N N 0.332 39.473 -21.089 -3.286 -2.090 0.279 C21 A1CLP 4 A1CLP C22 C5 C 0 1 N N N N N N -0.769 40.237 -21.842 -3.133 -3.446 0.972 C22 A1CLP 5 A1CLP C24 C6 C 0 1 N N N N N N -2.339 40.016 -23.381 -4.001 -5.705 1.058 C24 A1CLP 6 A1CLP C26 C7 C 0 1 N N N N N N 0.672 38.050 -23.000 -5.661 -2.482 0.034 C26 A1CLP 7 A1CLP C28 C8 C 0 1 N N N N N N 3.858 41.367 -18.716 -0.772 3.497 -1.660 C28 A1CLP 8 A1CLP C01 C9 C 0 1 N N N N N N 12.515 45.220 -19.089 8.158 -2.699 -0.580 C01 A1CLP 9 A1CLP C02 C10 C 0 1 Y N N N N N 11.172 45.533 -19.784 6.665 -2.517 -0.686 C02 A1CLP 10 A1CLP C03 C11 C 0 1 Y N N N N N 9.991 45.454 -19.048 6.063 -1.449 -0.054 C03 A1CLP 11 A1CLP C04 C12 C 0 1 Y N N N N N 8.775 45.725 -19.681 4.678 -1.291 -0.160 C04 A1CLP 12 A1CLP C05 C13 C 0 1 Y N N N N N 7.456 45.634 -18.907 3.988 -0.157 0.502 C05 A1CLP 13 A1CLP C06 C14 C 0 1 Y N N N N N 7.063 44.428 -18.278 3.101 0.637 -0.217 C06 A1CLP 14 A1CLP C07 C15 C 0 1 N N N N N N 7.876 43.110 -18.315 2.842 0.346 -1.673 C07 A1CLP 15 A1CLP C08 C16 C 0 1 Y N N N N N 5.838 44.433 -17.588 2.455 1.699 0.404 C08 A1CLP 16 A1CLP C11 C17 C 0 1 N N N N N N 4.361 42.070 -16.053 -0.397 2.461 1.020 C11 A1CLP 17 A1CLP C12 C18 C 0 1 N N N N N N 4.615 40.616 -16.508 -1.201 1.730 -0.058 C12 A1CLP 18 A1CLP C14 C19 C 0 1 N N N N N N 4.485 39.225 -18.225 -2.695 2.053 -1.936 C14 A1CLP 19 A1CLP C16 C20 C 0 1 Y N N N N N 5.214 38.336 -20.531 -5.049 2.183 -1.115 C16 A1CLP 20 A1CLP C18 C21 C 0 1 Y N N N N N 3.669 38.157 -22.373 -5.995 0.376 0.115 C18 A1CLP 21 A1CLP C19 C22 C 0 1 Y N N N N N 2.686 38.650 -21.522 -4.784 -0.295 -0.020 C19 A1CLP 22 A1CLP C25 C23 C 0 1 N N N N N N -0.476 38.824 -23.674 -5.509 -3.839 0.727 C25 A1CLP 23 A1CLP C29 C24 C 0 1 N N N N N N 3.094 42.550 -18.098 0.044 4.283 -0.631 C29 A1CLP 24 A1CLP C30 C25 C 0 1 N N N N N N 3.199 44.086 -16.589 1.455 4.092 1.424 C30 A1CLP 25 A1CLP C31 C26 C 0 1 N N N N N N 3.691 45.513 -16.703 2.003 3.100 2.453 C31 A1CLP 26 A1CLP C32 C27 C 0 1 Y N N N N N 5.020 45.582 -17.487 2.691 1.961 1.743 C32 A1CLP 27 A1CLP C33 C28 C 0 1 Y N N N N N 5.423 46.784 -18.113 3.576 1.170 2.459 C33 A1CLP 28 A1CLP C34 C29 C 0 1 Y N N N N N 6.641 46.795 -18.818 4.224 0.116 1.849 C34 A1CLP 29 A1CLP C35 C30 C 0 1 Y N N N N N 8.780 46.094 -21.028 3.962 -2.230 -0.907 C35 A1CLP 30 A1CLP C36 C31 C 0 1 Y N N N N N 9.997 46.163 -21.693 4.644 -3.270 -1.507 C36 A1CLP 31 A1CLP N13 N1 N 0 1 N N N N N N 3.957 40.246 -17.773 -1.803 2.711 -0.971 N13 A1CLP 32 A1CLP N20 N2 N 0 1 N N N N N N 1.311 38.858 -21.980 -4.632 -1.561 0.535 N20 A1CLP 33 A1CLP N23 N3 N 0 1 N N N N N N -1.358 39.424 -22.788 -4.162 -4.368 0.471 N23 A1CLP 34 A1CLP N27 N4 N 0 1 Y N N N N N 2.969 38.967 -20.256 -3.774 0.262 -0.669 N27 A1CLP 35 A1CLP N37 N5 N 0 1 Y N N N N N 11.137 45.889 -21.067 5.953 -3.379 -1.386 N37 A1CLP 36 A1CLP O09 O1 O 0 1 N N N N N N 5.494 43.182 -16.945 1.607 2.461 -0.336 O09 A1CLP 37 A1CLP H171 H1 H 0 0 N N N N N N 5.751 37.613 -22.501 -7.062 2.178 -0.356 H171 A1CLP 38 A1CLP H211 H2 H 0 0 N N N N N N -0.139 38.682 -20.487 -2.542 -1.395 0.670 H211 A1CLP 39 A1CLP H212 H3 H 0 0 N N N N N N 0.856 40.177 -20.425 -3.141 -2.211 -0.794 H212 A1CLP 40 A1CLP H221 H4 H 0 0 N N N N N N -1.533 40.571 -21.125 -2.145 -3.853 0.760 H221 A1CLP 41 A1CLP H222 H5 H 0 0 N N N N N N -0.327 41.112 -22.341 -3.250 -3.319 2.048 H222 A1CLP 42 A1CLP H241 H6 H 0 0 N N N N N N -2.781 39.338 -24.126 -4.733 -6.384 0.619 H241 A1CLP 43 A1CLP H242 H7 H 0 0 N N N N N N -3.102 40.293 -22.639 -2.996 -6.073 0.853 H242 A1CLP 44 A1CLP H243 H8 H 0 0 N N N N N N -1.970 40.922 -23.884 -4.156 -5.650 2.135 H243 A1CLP 45 A1CLP H261 H9 H 0 0 N N N N N N 0.268 37.138 -22.536 -5.543 -2.609 -1.042 H261 A1CLP 46 A1CLP H262 H10 H 0 0 N N N N N N 1.417 37.775 -23.761 -6.650 -2.075 0.246 H262 A1CLP 47 A1CLP H281 H11 H 0 0 N N N N N N 4.871 41.697 -18.988 -1.247 4.191 -2.353 H281 A1CLP 48 A1CLP H282 H12 H 0 0 N N N N N N 3.328 41.030 -19.619 -0.112 2.828 -2.212 H282 A1CLP 49 A1CLP H011 H13 H 0 0 N N N N N N 13.338 45.343 -19.808 8.647 -2.167 -1.396 H011 A1CLP 50 A1CLP H012 H14 H 0 0 N N N N N N 12.660 45.910 -18.244 8.505 -2.302 0.374 H012 A1CLP 51 A1CLP H013 H15 H 0 0 N N N N N N 12.504 44.184 -18.719 8.400 -3.760 -0.641 H013 A1CLP 52 A1CLP H031 H16 H 0 0 N N N N N N 10.015 45.187 -18.002 6.653 -0.745 0.515 H031 A1CLP 53 A1CLP H071 H17 H 0 0 N N N N N N 8.565 43.079 -17.458 2.006 -0.349 -1.761 H071 A1CLP 54 A1CLP H072 H18 H 0 0 N N N N N N 7.188 42.253 -18.263 2.599 1.273 -2.191 H072 A1CLP 55 A1CLP H073 H19 H 0 0 N N N N N N 8.453 43.061 -19.250 3.732 -0.098 -2.119 H073 A1CLP 56 A1CLP H111 H20 H 0 0 N N N N N N 3.479 42.084 -15.395 0.065 1.732 1.685 H111 A1CLP 57 A1CLP H112 H21 H 0 0 N N N N N N 5.241 42.423 -15.495 -1.061 3.108 1.593 H112 A1CLP 58 A1CLP H121 H22 H 0 0 N N N N N N 5.699 40.480 -16.633 -0.540 1.069 -0.619 H121 A1CLP 59 A1CLP H122 H23 H 0 0 N N N N N N 4.249 39.941 -15.720 -1.989 1.142 0.412 H122 A1CLP 60 A1CLP H141 H24 H 0 0 N N N N N N 4.158 38.382 -17.598 -2.153 1.261 -2.451 H141 A1CLP 61 A1CLP H142 H25 H 0 0 N N N N N N 5.574 39.351 -18.132 -3.047 2.786 -2.663 H142 A1CLP 62 A1CLP H161 H26 H 0 0 N N N N N N 6.205 38.210 -20.121 -5.124 3.164 -1.561 H161 A1CLP 63 A1CLP H181 H27 H 0 0 N N N N N N 3.438 37.906 -23.398 -6.818 -0.080 0.646 H181 A1CLP 64 A1CLP H251 H28 H 0 0 N N N N N N -1.043 38.121 -24.302 -5.653 -3.717 1.800 H251 A1CLP 65 A1CLP H252 H29 H 0 0 N N N N N N -0.037 39.609 -24.307 -6.252 -4.533 0.336 H252 A1CLP 66 A1CLP H291 H30 H 0 0 N N N N N N 2.839 43.318 -18.843 -0.613 4.964 -0.090 H291 A1CLP 67 A1CLP H292 H31 H 0 0 N N N N N N 2.181 42.230 -17.575 0.821 4.853 -1.140 H292 A1CLP 68 A1CLP H301 H32 H 0 0 N N N N N N 2.228 44.025 -17.102 2.280 4.635 0.962 H301 A1CLP 69 A1CLP H302 H33 H 0 0 N N N N N N 3.064 43.863 -15.520 0.782 4.796 1.915 H302 A1CLP 70 A1CLP H311 H34 H 0 0 N N N N N N 2.933 46.114 -17.227 2.717 3.607 3.102 H311 A1CLP 71 A1CLP H312 H35 H 0 0 N N N N N N 3.848 45.921 -15.693 1.182 2.709 3.053 H312 A1CLP 72 A1CLP H331 H36 H 0 0 N N N N N N 4.811 47.672 -18.052 3.760 1.380 3.502 H331 A1CLP 73 A1CLP H341 H37 H 0 0 N N N N N N 6.963 47.705 -19.302 4.913 -0.495 2.413 H341 A1CLP 74 A1CLP H351 H38 H 0 0 N N N N N N 7.857 46.321 -21.541 2.891 -2.144 -1.013 H351 A1CLP 75 A1CLP H361 H39 H 0 0 N N N N N N 10.018 46.444 -22.736 4.099 -4.000 -2.086 H361 A1CLP 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CLP C02 C01 SING N N 1 A1CLP C03 C02 DOUB Y N 2 A1CLP C04 C03 SING Y N 3 A1CLP C06 C05 DOUB Y N 4 A1CLP C07 C06 SING N N 5 A1CLP C08 C06 SING Y N 6 A1CLP C10 O09 SING N N 7 A1CLP C12 C11 SING N N 8 A1CLP N13 C12 SING N N 9 A1CLP C15 C14 SING N N 10 A1CLP C16 C15 DOUB Y N 11 A1CLP C17 C16 SING Y N 12 A1CLP C18 C17 DOUB Y N 13 A1CLP C19 C18 SING Y N 14 A1CLP C21 N20 SING N N 15 A1CLP C22 C21 SING N N 16 A1CLP N23 C22 SING N N 17 A1CLP C24 N23 SING N N 18 A1CLP C25 N23 SING N N 19 A1CLP C26 C25 SING N N 20 A1CLP N20 C19 SING N N 21 A1CLP N27 C19 DOUB Y N 22 A1CLP C14 N13 SING N N 23 A1CLP C28 N13 SING N N 24 A1CLP C29 C28 SING N N 25 A1CLP C11 C10 SING N N 26 A1CLP C30 C10 SING N N 27 A1CLP C31 C30 SING N N 28 A1CLP O09 C08 SING N N 29 A1CLP C32 C08 DOUB Y N 30 A1CLP C33 C32 SING Y N 31 A1CLP C34 C33 DOUB Y N 32 A1CLP C05 C04 SING N N 33 A1CLP C35 C04 DOUB Y N 34 A1CLP C36 C35 SING Y N 35 A1CLP N37 C36 DOUB Y N 36 A1CLP C02 N37 SING Y N 37 A1CLP C05 C34 SING Y N 38 A1CLP C10 C29 SING N N 39 A1CLP C15 N27 SING Y N 40 A1CLP N20 C26 SING N N 41 A1CLP C31 C32 SING N N 42 A1CLP C17 H171 SING N N 43 A1CLP C21 H211 SING N N 44 A1CLP C21 H212 SING N N 45 A1CLP C22 H221 SING N N 46 A1CLP C22 H222 SING N N 47 A1CLP C24 H241 SING N N 48 A1CLP C24 H242 SING N N 49 A1CLP C24 H243 SING N N 50 A1CLP C26 H261 SING N N 51 A1CLP C26 H262 SING N N 52 A1CLP C28 H281 SING N N 53 A1CLP C28 H282 SING N N 54 A1CLP C01 H011 SING N N 55 A1CLP C01 H012 SING N N 56 A1CLP C01 H013 SING N N 57 A1CLP C03 H031 SING N N 58 A1CLP C07 H071 SING N N 59 A1CLP C07 H072 SING N N 60 A1CLP C07 H073 SING N N 61 A1CLP C11 H111 SING N N 62 A1CLP C11 H112 SING N N 63 A1CLP C12 H121 SING N N 64 A1CLP C12 H122 SING N N 65 A1CLP C14 H141 SING N N 66 A1CLP C14 H142 SING N N 67 A1CLP C16 H161 SING N N 68 A1CLP C18 H181 SING N N 69 A1CLP C25 H251 SING N N 70 A1CLP C25 H252 SING N N 71 A1CLP C29 H291 SING N N 72 A1CLP C29 H292 SING N N 73 A1CLP C30 H301 SING N N 74 A1CLP C30 H302 SING N N 75 A1CLP C31 H311 SING N N 76 A1CLP C31 H312 SING N N 77 A1CLP C33 H331 SING N N 78 A1CLP C34 H341 SING N N 79 A1CLP C35 H351 SING N N 80 A1CLP C36 H361 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CLP SMILES ACDLabs 14.52 "CN1CCN(CC1)c1cccc(n1)CN1CCC2(CC1)CCc1ccc(c3ccnc(C)c3)c(C)c1O2" A1CLP InChI InChI 1.06 "InChI=1S/C31H39N5O/c1-23-21-26(10-14-32-23)28-8-7-25-9-11-31(37-30(25)24(28)2)12-15-35(16-13-31)22-27-5-4-6-29(33-27)36-19-17-34(3)18-20-36/h4-8,10,14,21H,9,11-13,15-20,22H2,1-3H3" A1CLP InChIKey InChI 1.06 WVJWVSWBFWSOIU-UHFFFAOYSA-N A1CLP SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2cccc(CN3CCC4(CC3)CCc5ccc(c(C)c5O4)c6ccnc(C)c6)n2" A1CLP SMILES CACTVS 3.385 "CN1CCN(CC1)c2cccc(CN3CCC4(CC3)CCc5ccc(c(C)c5O4)c6ccnc(C)c6)n2" A1CLP SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(ccn1)c2ccc3c(c2C)OC4(CC3)CCN(CC4)Cc5cccc(n5)N6CCN(CC6)C" A1CLP SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(ccn1)c2ccc3c(c2C)OC4(CC3)CCN(CC4)Cc5cccc(n5)N6CCN(CC6)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CLP "SYSTEMATIC NAME" ACDLabs 14.52 "(7M)-8-methyl-1'-{[6-(4-methylpiperazin-1-yl)pyridin-2-yl]methyl}-7-(2-methylpyridin-4-yl)-3,4-dihydrospiro[[1]benzopyran-2,4'-piperidine]" A1CLP "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "8-methyl-1'-[[6-(4-methylpiperazin-1-yl)pyridin-2-yl]methyl]-7-(2-methylpyridin-4-yl)spiro[3,4-dihydrochromene-2,4'-piperidine]" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CLP "Create component" 2025-08-04 RCSB A1CLP "Initial release" 2026-01-21 RCSB #