data_A1CLR # _chem_comp.id A1CLR _chem_comp.name "(1R,2S)-2-(1H-indazol-4-yl)cyclopentane-1-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H14 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-04 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 230.262 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CLR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7IJN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CLR N1 N1 N 0 1 Y N N N N N 22.951 45.461 7.653 3.285 -1.401 -0.929 N1 A1CLR 1 A1CLR C4 C1 C 0 1 N N N N N N 21.302 50.301 10.538 -1.817 -1.574 1.254 C4 A1CLR 2 A1CLR C5 C2 C 0 1 N N S N N N 22.162 49.333 9.718 -1.023 -1.125 0.010 C5 A1CLR 3 A1CLR C6 C3 C 0 1 Y N N N N N 22.187 47.908 10.240 0.137 -0.256 0.423 C6 A1CLR 4 A1CLR C7 C4 C 0 1 Y N N N N N 21.901 47.600 11.571 -0.070 0.829 1.225 C7 A1CLR 5 A1CLR C8 C5 C 0 1 Y N N N N N 21.924 46.289 12.039 0.993 1.635 1.614 C8 A1CLR 6 A1CLR C10 C6 C 0 1 Y N N N N N 22.483 45.522 9.856 2.508 0.262 0.381 C10 A1CLR 7 A1CLR O O1 O 0 1 N N N N N N 25.416 48.561 9.907 -1.939 1.980 -0.357 O A1CLR 8 A1CLR C C7 C 0 1 N N N N N N 24.644 49.347 10.410 -1.493 1.089 -1.041 C A1CLR 9 A1CLR O1 O2 O 0 1 N N N N N N 24.662 49.663 11.660 -0.548 1.355 -1.957 O1 A1CLR 10 A1CLR C1 C8 C 0 1 N N R N N N 23.545 50.034 9.627 -1.998 -0.319 -0.867 C1 A1CLR 11 A1CLR C3 C9 C 0 1 N N N N N N 21.732 51.621 10.017 -3.294 -1.558 0.788 C3 A1CLR 12 A1CLR C2 C10 C 0 1 N N N N N N 23.250 51.506 10.015 -3.351 -0.308 -0.125 C2 A1CLR 13 A1CLR C12 C11 C 0 1 Y N N N N N 22.479 46.844 9.377 1.432 -0.557 -0.013 C12 A1CLR 14 A1CLR C11 C12 C 0 1 Y N N N N N 22.773 46.721 7.999 2.001 -1.606 -0.852 C11 A1CLR 15 A1CLR N N2 N 0 1 Y N N N N N 22.764 44.728 8.787 3.636 -0.268 -0.188 N A1CLR 16 A1CLR C9 C13 C 0 1 Y N N N N N 22.210 45.235 11.189 2.266 1.362 1.201 C9 A1CLR 17 A1CLR H8 H1 H 0 1 N N N N N N 21.513 50.209 11.614 -1.521 -2.580 1.552 H8 A1CLR 18 A1CLR H9 H2 H 0 1 N N N N N N 20.230 50.132 10.359 -1.666 -0.874 2.076 H9 A1CLR 19 A1CLR H1 H3 H 0 1 N N N N N N 21.745 49.306 8.700 -0.661 -1.995 -0.537 H1 A1CLR 20 A1CLR H10 H4 H 0 1 N N N N N N 21.656 48.399 12.255 -1.070 1.062 1.562 H10 A1CLR 21 A1CLR H11 H5 H 0 1 N N N N N N 21.716 46.092 13.080 0.810 2.490 2.249 H11 A1CLR 22 A1CLR H3 H6 H 0 1 N N N N N N 25.360 49.189 12.097 -0.256 2.274 -2.032 H3 A1CLR 23 A1CLR H H7 H 0 1 N N N N N N 23.840 50.031 8.567 -2.109 -0.799 -1.839 H A1CLR 24 A1CLR H6 H8 H 0 1 N N N N N N 21.397 52.435 10.677 -3.531 -2.460 0.224 H6 A1CLR 25 A1CLR H7 H9 H 0 1 N N N N N N 21.346 51.790 9.001 -3.966 -1.449 1.640 H7 A1CLR 26 A1CLR H4 H10 H 0 1 N N N N N N 23.655 51.731 11.013 -3.450 0.598 0.474 H4 A1CLR 27 A1CLR H5 H11 H 0 1 N N N N N N 23.688 52.195 9.278 -4.175 -0.390 -0.833 H5 A1CLR 28 A1CLR H13 H12 H 0 1 N N N N N N 22.843 47.555 7.316 1.456 -2.409 -1.326 H13 A1CLR 29 A1CLR H2 H13 H 0 1 N N N N N N 22.826 43.731 8.828 4.534 0.087 -0.093 H2 A1CLR 30 A1CLR H12 H14 H 0 1 N N N N N N 22.221 44.218 11.551 3.083 1.998 1.509 H12 A1CLR 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CLR C O DOUB N N 1 A1CLR O1 C SING N N 2 A1CLR C1 C SING N N 3 A1CLR C1 C2 SING N N 4 A1CLR C2 C3 SING N N 5 A1CLR C3 C4 SING N N 6 A1CLR C4 C5 SING N N 7 A1CLR C5 C1 SING N N 8 A1CLR C6 C5 SING N N 9 A1CLR C6 C7 DOUB Y N 10 A1CLR C7 C8 SING Y N 11 A1CLR C8 C9 DOUB Y N 12 A1CLR C9 C10 SING Y N 13 A1CLR C10 N SING Y N 14 A1CLR N N1 SING Y N 15 A1CLR N1 C11 DOUB Y N 16 A1CLR C11 C12 SING Y N 17 A1CLR C12 C6 SING Y N 18 A1CLR C10 C12 DOUB Y N 19 A1CLR C4 H8 SING N N 20 A1CLR C4 H9 SING N N 21 A1CLR C5 H1 SING N N 22 A1CLR C7 H10 SING N N 23 A1CLR C8 H11 SING N N 24 A1CLR O1 H3 SING N N 25 A1CLR C1 H SING N N 26 A1CLR C3 H6 SING N N 27 A1CLR C3 H7 SING N N 28 A1CLR C2 H4 SING N N 29 A1CLR C2 H5 SING N N 30 A1CLR C11 H13 SING N N 31 A1CLR N H2 SING N N 32 A1CLR C9 H12 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CLR SMILES ACDLabs 14.52 "O=C(O)C1CCCC1c1cccc2[NH]ncc12" A1CLR InChI InChI 1.06 "InChI=1S/C13H14N2O2/c16-13(17)10-5-1-3-8(10)9-4-2-6-12-11(9)7-14-15-12/h2,4,6-8,10H,1,3,5H2,(H,14,15)(H,16,17)/t8-,10-/m1/s1" A1CLR InChIKey InChI 1.06 AMQYBXLXVKKGJJ-PSASIEDQSA-N A1CLR SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1CCC[C@@H]1c2cccc3[nH]ncc23" A1CLR SMILES CACTVS 3.385 "OC(=O)[CH]1CCC[CH]1c2cccc3[nH]ncc23" A1CLR SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2cn[nH]c2c1)[C@H]3CCC[C@H]3C(=O)O" A1CLR SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2cn[nH]c2c1)C3CCCC3C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CLR "SYSTEMATIC NAME" ACDLabs 14.52 "(1R,2S)-2-(1H-indazol-4-yl)cyclopentane-1-carboxylic acid" A1CLR "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{R},2~{S})-2-(1~{H}-indazol-4-yl)cyclopentane-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CLR "Create component" 2025-08-04 RCSB A1CLR "Initial release" 2025-08-13 RCSB #