data_A1CN8 # _chem_comp.id A1CN8 _chem_comp.name "6-({2,3-difluoro-5-[2-(4-fluoropiperidin-1-yl)ethyl]phenoxy}methyl)-4-methylpyridin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 F3 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-21 _chem_comp.pdbx_modified_date 2025-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 379.419 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CN8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Q4N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CN8 C17 C1 C 0 1 N N N N N N -6.446 1.782 -36.243 -2.414 -0.367 -0.973 C17 A1CN8 1 A1CN8 C22 C2 C 0 1 N N N N N N -3.649 0.430 -34.833 -4.734 1.733 1.110 C22 A1CN8 2 A1CN8 C11 C3 C 0 1 Y N N N N N -8.880 1.632 -39.179 1.131 -1.396 -0.161 C11 A1CN8 3 A1CN8 C18 C4 C 0 1 N N N N N N -5.577 0.526 -36.347 -3.062 0.181 0.300 C18 A1CN8 4 A1CN8 C23 C5 C 0 1 N N N N N N -2.851 -0.837 -34.539 -5.851 2.684 0.672 C23 A1CN8 5 A1CN8 F12 F1 F 0 1 N N N N N N -8.967 3.001 -41.153 2.048 -3.512 0.398 F12 A1CN8 6 A1CN8 F13 F2 F 0 1 N N N N N N -6.845 4.438 -40.322 -0.427 -4.662 0.182 F13 A1CN8 7 A1CN8 C02 C6 C 0 1 Y N N N N N -14.389 0.682 -39.417 5.408 2.759 -0.169 C02 A1CN8 8 A1CN8 C03 C7 C 0 1 Y N N N N N -14.709 -0.289 -40.365 6.438 1.889 0.174 C03 A1CN8 9 A1CN8 C04 C8 C 0 1 Y N N N N N -13.716 -1.173 -40.774 6.152 0.551 0.370 C04 A1CN8 10 A1CN8 C05 C9 C 0 1 Y N N N N N -12.439 -1.071 -40.236 4.839 0.124 0.216 C05 A1CN8 11 A1CN8 C06 C10 C 0 1 Y N N N N N -12.148 -0.094 -39.293 3.866 1.042 -0.126 C06 A1CN8 12 A1CN8 C07 C11 C 0 1 N N N N N N -14.017 -2.240 -41.781 7.240 -0.424 0.742 C07 A1CN8 13 A1CN8 C08 C12 C 0 1 N N N N N N -10.736 0.018 -38.740 2.440 0.585 -0.294 C08 A1CN8 14 A1CN8 C12 C13 C 0 1 Y N N N N N -8.394 2.681 -39.971 0.977 -2.757 0.068 C12 A1CN8 15 A1CN8 C13 C14 C 0 1 Y N N N N N -7.297 3.427 -39.551 -0.275 -3.338 -0.041 C13 A1CN8 16 A1CN8 C14 C15 C 0 1 Y N N N N N -6.669 3.139 -38.339 -1.371 -2.562 -0.379 C14 A1CN8 17 A1CN8 C15 C16 C 0 1 Y N N N N N -7.135 2.092 -37.552 -1.218 -1.208 -0.606 C15 A1CN8 18 A1CN8 C16 C17 C 0 1 Y N N N N N -8.240 1.347 -37.969 0.030 -0.623 -0.499 C16 A1CN8 19 A1CN8 C24 C18 C 0 1 N N N N N N -3.168 -1.894 -35.583 -6.978 1.875 0.025 C24 A1CN8 20 A1CN8 C25 C19 C 0 1 N N N N N N -4.648 -2.255 -35.501 -6.414 1.084 -1.158 C25 A1CN8 21 A1CN8 C26 C20 C 0 1 N N N N N N -5.423 -1.257 -34.650 -5.281 0.180 -0.668 C26 A1CN8 22 A1CN8 F27 F3 F 0 1 N N N N N N -2.913 -1.387 -36.830 -7.517 0.989 0.965 F27 A1CN8 23 A1CN8 N01 N1 N 0 1 Y N N N N N -13.136 0.755 -38.908 4.168 2.314 -0.301 N01 A1CN8 24 A1CN8 N02 N2 N 0 1 N N N N N N -15.346 1.554 -39.016 5.681 4.107 -0.369 N02 A1CN8 25 A1CN8 N21 N3 N 0 1 N N N N N N -5.094 0.147 -34.994 -4.227 1.001 -0.058 N21 A1CN8 26 A1CN8 O09 O1 O 0 1 N N N N N N -9.975 0.892 -39.595 2.358 -0.821 -0.050 O09 A1CN8 27 A1CN8 H1 H1 H 0 1 N N N N N N -5.809 2.635 -35.964 -3.135 -0.978 -1.515 H1 A1CN8 28 A1CN8 H2 H2 H 0 1 N N N N N N -7.209 1.625 -35.466 -2.094 0.463 -1.604 H2 A1CN8 29 A1CN8 H3 H3 H 0 1 N N N N N N -3.269 0.882 -35.761 -3.923 2.307 1.558 H3 A1CN8 30 A1CN8 H4 H4 H 0 1 N N N N N N -3.515 1.136 -34.000 -5.125 1.025 1.841 H4 A1CN8 31 A1CN8 H5 H5 H 0 1 N N N N N N -6.172 -0.298 -36.769 -3.381 -0.649 0.930 H5 A1CN8 32 A1CN8 H6 H6 H 0 1 N N N N N N -4.716 0.729 -37.001 -2.340 0.792 0.841 H6 A1CN8 33 A1CN8 H7 H7 H 0 1 N N N N N N -3.120 -1.216 -33.542 -6.237 3.216 1.542 H7 A1CN8 34 A1CN8 H8 H8 H 0 1 N N N N N N -1.776 -0.607 -34.566 -5.457 3.401 -0.048 H8 A1CN8 35 A1CN8 H9 H9 H 0 1 N N N N N N -15.707 -0.353 -40.773 7.449 2.255 0.285 H9 A1CN8 36 A1CN8 H10 H10 H 0 1 N N N N N N -11.667 -1.756 -40.553 4.582 -0.915 0.361 H10 A1CN8 37 A1CN8 H11 H11 H 0 1 N N N N N N -13.824 -1.855 -42.793 7.326 -0.475 1.827 H11 A1CN8 38 A1CN8 H12 H12 H 0 1 N N N N N N -13.375 -3.113 -41.593 6.993 -1.411 0.349 H12 A1CN8 39 A1CN8 H13 H13 H 0 1 N N N N N N -15.073 -2.536 -41.696 8.187 -0.090 0.317 H13 A1CN8 40 A1CN8 H14 H14 H 0 1 N N N N N N -10.268 -0.977 -38.716 1.803 1.115 0.414 H14 A1CN8 41 A1CN8 H15 H15 H 0 1 N N N N N N -10.769 0.432 -37.722 2.108 0.797 -1.311 H15 A1CN8 42 A1CN8 H16 H16 H 0 1 N N N N N N -5.824 3.727 -38.013 -2.348 -3.016 -0.464 H16 A1CN8 43 A1CN8 H17 H17 H 0 1 N N N N N N -8.605 0.541 -37.349 0.147 0.435 -0.678 H17 A1CN8 44 A1CN8 H18 H18 H 0 1 N N N N N N -2.566 -2.793 -35.384 -7.756 2.552 -0.327 H18 A1CN8 45 A1CN8 H19 H19 H 0 1 N N N N N N -5.070 -2.262 -36.517 -7.203 0.473 -1.597 H19 A1CN8 46 A1CN8 H20 H20 H 0 1 N N N N N N -4.747 -3.256 -35.056 -6.029 1.776 -1.908 H20 A1CN8 47 A1CN8 H21 H21 H 0 1 N N N N N N -6.500 -1.417 -34.808 -5.669 -0.521 0.071 H21 A1CN8 48 A1CN8 H22 H22 H 0 1 N N N N N N -5.178 -1.429 -33.591 -4.867 -0.374 -1.511 H22 A1CN8 49 A1CN8 H23 H23 H 0 1 N N N N N N -14.962 2.185 -38.342 4.965 4.717 -0.605 H23 A1CN8 50 A1CN8 H24 H24 H 0 1 N N N N N N -15.677 2.071 -39.805 6.589 4.437 -0.273 H24 A1CN8 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CN8 C07 C04 SING N N 1 A1CN8 F12 C12 SING N N 2 A1CN8 C04 C03 DOUB Y N 3 A1CN8 C04 C05 SING Y N 4 A1CN8 C03 C02 SING Y N 5 A1CN8 F13 C13 SING N N 6 A1CN8 C05 C06 DOUB Y N 7 A1CN8 C12 C13 DOUB Y N 8 A1CN8 C12 C11 SING Y N 9 A1CN8 O09 C11 SING N N 10 A1CN8 O09 C08 SING N N 11 A1CN8 C13 C14 SING Y N 12 A1CN8 C02 N02 SING N N 13 A1CN8 C02 N01 DOUB Y N 14 A1CN8 C06 N01 SING Y N 15 A1CN8 C06 C08 SING N N 16 A1CN8 C11 C16 DOUB Y N 17 A1CN8 C14 C15 DOUB Y N 18 A1CN8 C16 C15 SING Y N 19 A1CN8 C15 C17 SING N N 20 A1CN8 F27 C24 SING N N 21 A1CN8 C18 C17 SING N N 22 A1CN8 C18 N21 SING N N 23 A1CN8 C24 C25 SING N N 24 A1CN8 C24 C23 SING N N 25 A1CN8 C25 C26 SING N N 26 A1CN8 N21 C22 SING N N 27 A1CN8 N21 C26 SING N N 28 A1CN8 C22 C23 SING N N 29 A1CN8 C17 H1 SING N N 30 A1CN8 C17 H2 SING N N 31 A1CN8 C22 H3 SING N N 32 A1CN8 C22 H4 SING N N 33 A1CN8 C18 H5 SING N N 34 A1CN8 C18 H6 SING N N 35 A1CN8 C23 H7 SING N N 36 A1CN8 C23 H8 SING N N 37 A1CN8 C03 H9 SING N N 38 A1CN8 C05 H10 SING N N 39 A1CN8 C07 H11 SING N N 40 A1CN8 C07 H12 SING N N 41 A1CN8 C07 H13 SING N N 42 A1CN8 C08 H14 SING N N 43 A1CN8 C08 H15 SING N N 44 A1CN8 C14 H16 SING N N 45 A1CN8 C16 H17 SING N N 46 A1CN8 C24 H18 SING N N 47 A1CN8 C25 H19 SING N N 48 A1CN8 C25 H20 SING N N 49 A1CN8 C26 H21 SING N N 50 A1CN8 C26 H22 SING N N 51 A1CN8 N02 H23 SING N N 52 A1CN8 N02 H24 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CN8 SMILES ACDLabs 14.52 "Cc1cc(nc(N)c1)COc1cc(CCN2CCC(F)CC2)cc(F)c1F" A1CN8 InChI InChI 1.06 "InChI=1S/C20H24F3N3O/c1-13-8-16(25-19(24)9-13)12-27-18-11-14(10-17(22)20(18)23)2-5-26-6-3-15(21)4-7-26/h8-11,15H,2-7,12H2,1H3,(H2,24,25)" A1CN8 InChIKey InChI 1.06 GHGQQKFMHOQYBB-UHFFFAOYSA-N A1CN8 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(N)nc(COc2cc(CCN3CCC(F)CC3)cc(F)c2F)c1" A1CN8 SMILES CACTVS 3.385 "Cc1cc(N)nc(COc2cc(CCN3CCC(F)CC3)cc(F)c2F)c1" A1CN8 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(nc(c1)N)COc2cc(cc(c2F)F)CCN3CCC(CC3)F" A1CN8 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(nc(c1)N)COc2cc(cc(c2F)F)CCN3CCC(CC3)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CN8 "SYSTEMATIC NAME" ACDLabs 14.52 "6-({2,3-difluoro-5-[2-(4-fluoropiperidin-1-yl)ethyl]phenoxy}methyl)-4-methylpyridin-2-amine" A1CN8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "6-[[2,3-bis(fluoranyl)-5-[2-(4-fluoranylpiperidin-1-yl)ethyl]phenoxy]methyl]-4-methyl-pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CN8 "Create component" 2025-08-21 RCSB A1CN8 "Initial release" 2025-09-10 RCSB #