data_A1COF # _chem_comp.id A1COF _chem_comp.name "4-amino-N-[(2,4-difluorophenyl)methyl]-1-hydroxy-5-(hydroxymethyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 F2 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-21 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 376.314 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1COF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Q50 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1COF N1 N1 N 0 1 N N N N N N 57.283 74.367 93.083 -1.784 -1.908 0.129 N1 A1COF 1 A1COF N3 N2 N 0 1 N N N N N N 56.997 70.224 93.639 -2.497 2.211 0.067 N3 A1COF 2 A1COF C4 C1 C 0 1 N N N N N N 60.904 70.862 90.301 2.582 1.699 0.217 C4 A1COF 3 A1COF C5 C2 C 0 1 Y N N N N N 60.403 70.588 88.884 3.863 0.906 0.193 C5 A1COF 4 A1COF C6 C3 C 0 1 Y N N N N N 59.949 71.626 88.084 4.317 0.360 -0.996 C6 A1COF 5 A1COF C7 C4 C 0 1 Y N N N N N 59.497 71.369 86.803 5.494 -0.369 -1.017 C7 A1COF 6 A1COF C8 C5 C 0 1 Y N N N N N 59.488 70.073 86.323 6.215 -0.551 0.149 C8 A1COF 7 A1COF C10 C6 C 0 1 Y N N N N N 60.394 69.292 88.401 4.587 0.728 1.357 C10 A1COF 8 A1COF C13 C7 C 0 1 Y N N N N N 56.300 73.873 93.896 -3.089 -1.477 0.031 C13 A1COF 9 A1COF C15 C8 C 0 1 Y N N N N N 54.267 73.111 95.560 -5.688 -0.629 -0.164 C15 A1COF 10 A1COF C17 C9 C 0 1 N N N N N N 54.791 70.676 95.340 -5.037 1.800 -0.120 C17 A1COF 11 A1COF C1 C10 C 0 1 N N N N N N 58.147 73.564 92.467 -0.758 -1.046 0.203 C1 A1COF 12 A1COF C11 C11 C 0 1 N N N N N N 57.060 71.663 93.474 -2.263 0.862 0.088 C11 A1COF 13 A1COF C12 C12 C 0 1 Y N N N N N 56.146 72.547 94.123 -3.370 -0.099 0.008 C12 A1COF 14 A1COF C14 C13 C 0 1 Y N N N N N 54.488 74.452 95.276 -5.338 -1.970 -0.136 C14 A1COF 15 A1COF C16 C14 C 0 1 Y N N N N N 55.076 72.134 94.995 -4.697 0.332 -0.092 C16 A1COF 16 A1COF C2 C15 C 0 1 N N N N N N 58.060 72.176 92.649 -0.960 0.356 0.185 C2 A1COF 17 A1COF C3 C16 C 0 1 N N N N N N 59.037 71.229 91.951 0.184 1.270 0.269 C3 A1COF 18 A1COF C9 C17 C 0 1 Y N N N N N 59.938 69.035 87.120 5.759 -0.004 1.337 C9 A1COF 19 A1COF F1 F1 F 0 1 N N N N N N 59.949 72.907 88.550 3.612 0.539 -2.134 F1 A1COF 20 A1COF F2 F2 F 0 1 N N N N N N 59.040 69.823 85.063 7.363 -1.263 0.130 F2 A1COF 21 A1COF N2 N3 N 0 1 N N N N N N 59.976 71.751 90.976 1.440 0.782 0.244 N2 A1COF 22 A1COF N4 N4 N 0 1 Y N N N N N 55.475 74.798 94.471 -4.082 -2.353 -0.041 N4 A1COF 23 A1COF O1 O1 O 0 1 N N N N N N 58.985 74.022 91.772 0.377 -1.480 0.289 O1 A1COF 24 A1COF O2 O2 O 0 1 N N N N N N 57.384 75.750 92.892 -1.518 -3.298 0.157 O2 A1COF 25 A1COF O3 O3 O 0 1 N N N N N N 59.021 70.076 92.201 -0.001 2.470 0.360 O3 A1COF 26 A1COF O4 O4 O 0 1 N N N N N N 55.872 70.188 96.082 -6.456 1.962 -0.086 O4 A1COF 27 A1COF H8 H1 H 0 1 N N N N N N 56.241 69.991 94.250 -2.020 2.795 0.677 H8 A1COF 28 A1COF H9 H2 H 0 1 N N N N N N 56.851 69.793 92.749 -3.140 2.582 -0.557 H9 A1COF 29 A1COF H4 H3 H 0 1 N N N N N N 60.974 69.914 90.855 2.562 2.331 1.105 H4 A1COF 30 A1COF H3 H4 H 0 1 N N N N N N 61.897 71.334 90.255 2.525 2.324 -0.674 H3 A1COF 31 A1COF H5 H5 H 0 1 N N N N N N 59.152 72.180 86.178 5.848 -0.795 -1.944 H5 A1COF 32 A1COF H7 H6 H 0 1 N N N N N N 60.743 68.481 89.023 4.235 1.157 2.283 H7 A1COF 33 A1COF H11 H7 H 0 1 N N N N N N 53.463 72.827 96.223 -6.725 -0.338 -0.243 H11 A1COF 34 A1COF H12 H8 H 0 1 N N N N N N 53.868 70.607 95.935 -4.594 2.292 0.747 H12 A1COF 35 A1COF H13 H9 H 0 1 N N N N N N 54.677 70.089 94.417 -4.642 2.247 -1.032 H13 A1COF 36 A1COF H10 H10 H 0 1 N N N N N N 53.854 75.210 95.713 -6.115 -2.719 -0.192 H10 A1COF 37 A1COF H6 H11 H 0 1 N N N N N N 59.933 68.023 86.742 6.322 -0.147 2.248 H6 A1COF 38 A1COF H2 H12 H 0 1 N N N N N N 59.984 72.729 90.768 1.588 -0.176 0.244 H2 A1COF 39 A1COF H1 H13 H 0 1 N N N N N N 58.109 75.937 92.307 -0.579 -3.518 0.227 H1 A1COF 40 A1COF H14 H14 H 0 1 N N N N N N 55.716 69.279 96.309 -6.748 2.884 -0.101 H14 A1COF 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1COF F2 C8 SING N N 1 A1COF C8 C7 DOUB Y N 2 A1COF C8 C9 SING Y N 3 A1COF C7 C6 SING Y N 4 A1COF C9 C10 DOUB Y N 5 A1COF C6 F1 SING N N 6 A1COF C6 C5 DOUB Y N 7 A1COF C10 C5 SING Y N 8 A1COF C5 C4 SING N N 9 A1COF C4 N2 SING N N 10 A1COF N2 C3 SING N N 11 A1COF O1 C1 DOUB N N 12 A1COF C3 O3 DOUB N N 13 A1COF C3 C2 SING N N 14 A1COF C1 C2 SING N N 15 A1COF C1 N1 SING N N 16 A1COF C2 C11 DOUB N N 17 A1COF O2 N1 SING N N 18 A1COF N1 C13 SING N N 19 A1COF C11 N3 SING N N 20 A1COF C11 C12 SING N N 21 A1COF C13 C12 DOUB Y N 22 A1COF C13 N4 SING Y N 23 A1COF C12 C16 SING Y N 24 A1COF N4 C14 DOUB Y N 25 A1COF C16 C17 SING N N 26 A1COF C16 C15 DOUB Y N 27 A1COF C14 C15 SING Y N 28 A1COF C17 O4 SING N N 29 A1COF N3 H8 SING N N 30 A1COF N3 H9 SING N N 31 A1COF C4 H4 SING N N 32 A1COF C4 H3 SING N N 33 A1COF C7 H5 SING N N 34 A1COF C10 H7 SING N N 35 A1COF C15 H11 SING N N 36 A1COF C17 H12 SING N N 37 A1COF C17 H13 SING N N 38 A1COF C14 H10 SING N N 39 A1COF C9 H6 SING N N 40 A1COF N2 H2 SING N N 41 A1COF O2 H1 SING N N 42 A1COF O4 H14 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1COF SMILES ACDLabs 14.52 "Fc1ccc(CNC(=O)C2=C(N)c3c(nccc3CO)N(O)C2=O)c(F)c1" A1COF InChI InChI 1.06 "InChI=1S/C17H14F2N4O4/c18-10-2-1-8(11(19)5-10)6-22-16(25)13-14(20)12-9(7-24)3-4-21-15(12)23(27)17(13)26/h1-5,24,27H,6-7,20H2,(H,22,25)" A1COF InChIKey InChI 1.06 GAJNOXPBHJNHIV-UHFFFAOYSA-N A1COF SMILES_CANONICAL CACTVS 3.385 "NC1=C(C(=O)NCc2ccc(F)cc2F)C(=O)N(O)c3nccc(CO)c13" A1COF SMILES CACTVS 3.385 "NC1=C(C(=O)NCc2ccc(F)cc2F)C(=O)N(O)c3nccc(CO)c13" A1COF SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1F)F)CNC(=O)C2=C(c3c(ccnc3N(C2=O)O)CO)N" A1COF SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1F)F)CNC(=O)C2=C(c3c(ccnc3N(C2=O)O)CO)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1COF "SYSTEMATIC NAME" ACDLabs 14.52 "4-amino-N-[(2,4-difluorophenyl)methyl]-1-hydroxy-5-(hydroxymethyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide" A1COF "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-azanyl-~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-5-(hydroxymethyl)-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1COF "Create component" 2025-08-21 RCSB A1COF "Initial release" 2026-01-14 RCSB #