data_A1COT # _chem_comp.id A1COT _chem_comp.name "(4P)-3-ethyl-4-{(1P,4R)-1-[3-(trifluoromethoxy)phenyl]-1,5,6,7-tetrahydroimidazo[1,2-a]pyrimidin-3-yl}benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H19 F3 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-22 _chem_comp.pdbx_modified_date 2026-08-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.408 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1COT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Q5R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1COT C10 C1 C 0 1 N N N N N N 17.479 40.752 -20.872 1.839 0.384 0.266 C10 A1COT 1 A1COT C11 C2 C 0 1 N N N N N N 17.155 40.897 -19.556 0.584 -0.107 0.247 C11 A1COT 2 A1COT C12 C3 C 0 1 Y N N N N N 15.661 42.295 -18.210 -1.697 0.861 0.131 C12 A1COT 3 A1COT C13 C4 C 0 1 Y N N N N N 16.457 42.348 -17.074 -2.471 2.013 0.067 C13 A1COT 4 A1COT C14 C5 C 0 1 Y N N N N N 15.898 42.724 -15.866 -3.849 1.919 0.023 C14 A1COT 5 A1COT C16 C6 C 0 1 Y N N N N N 13.757 42.966 -16.898 -3.693 -0.474 0.107 C16 A1COT 6 A1COT C17 C7 C 0 1 N N N N N N 11.951 44.524 -16.710 -5.724 -1.709 0.080 C17 A1COT 7 A1COT C19 C8 C 0 1 N N N N N N 15.973 42.377 -20.757 0.425 2.113 0.174 C19 A1COT 8 A1COT C20 C9 C 0 1 N N N N N N 15.061 43.658 -22.548 0.987 4.441 0.184 C20 A1COT 9 A1COT C21 C10 C 0 1 N N N N N N 15.515 42.629 -23.557 2.287 4.017 -0.502 C21 A1COT 10 A1COT C22 C11 C 0 1 N N N N N N 16.756 41.910 -23.072 2.841 2.756 0.179 C22 A1COT 11 A1COT C1 C12 C 0 1 N N N N N N 21.367 41.249 -19.718 2.876 -0.230 -2.922 C1 A1COT 12 A1COT C2 C13 C 0 1 N N N N N N 20.438 41.271 -20.901 2.530 -1.350 -1.940 C2 A1COT 13 A1COT C3 C14 C 0 1 Y N N N N N 19.832 39.950 -21.323 3.426 -1.254 -0.732 C3 A1COT 14 A1COT C4 C15 C 0 1 Y N N N N N 20.651 38.914 -21.751 4.578 -1.985 -0.677 C4 A1COT 15 A1COT C5 C16 C 0 1 Y N N N N N 20.110 37.694 -22.156 5.410 -1.896 0.444 C5 A1COT 16 A1COT C6 C17 C 0 1 N N N N N N 20.972 36.621 -22.587 6.618 -2.662 0.502 C6 A1COT 17 A1COT N1 N1 N 0 1 N N N N N N 21.614 35.728 -22.907 7.576 -3.270 0.549 N1 A1COT 18 A1COT C7 C18 C 0 1 Y N N N N N 18.739 37.492 -22.137 5.061 -1.058 1.508 C7 A1COT 19 A1COT C8 C19 C 0 1 Y N N N N N 17.906 38.515 -21.722 3.909 -0.327 1.452 C8 A1COT 20 A1COT C9 C20 C 0 1 Y N N N N N 18.440 39.752 -21.330 3.081 -0.412 0.329 C9 A1COT 21 A1COT N2 N2 N 0 1 N N N N N N 16.224 41.895 -19.471 -0.302 0.956 0.181 N2 A1COT 22 A1COT C15 C21 C 0 1 Y N N N N N 14.556 43.036 -15.763 -4.461 0.681 0.043 C15 A1COT 23 A1COT O1 O1 O 0 1 N N N N N N 12.373 43.274 -16.815 -4.296 -1.691 0.127 O1 A1COT 24 A1COT F1 F1 F 0 1 N N N N N N 10.630 44.598 -16.731 -6.159 -1.092 -1.098 F1 A1COT 25 A1COT F2 F2 F 0 1 N N N N N N 12.369 45.269 -17.726 -6.176 -3.032 0.108 F2 A1COT 26 A1COT F3 F3 F 0 1 N N N N N N 12.365 45.035 -15.560 -6.235 -1.018 1.184 F3 A1COT 27 A1COT C18 C22 C 0 1 Y N N N N N 14.302 42.592 -18.111 -2.310 -0.384 0.150 C18 A1COT 28 A1COT N3 N3 N 0 1 N N N N N N 15.154 43.321 -21.123 0.006 3.351 0.144 N3 A1COT 29 A1COT N4 N4 N 0 1 N N N N N N 16.754 41.680 -21.624 1.758 1.767 0.210 N4 A1COT 30 A1COT H9 H1 H 0 1 N N N N N N 17.559 40.328 -18.732 0.314 -1.152 0.278 H9 A1COT 31 A1COT H10 H2 H 0 1 N N N N N N 17.506 42.097 -17.133 -1.995 2.983 0.051 H10 A1COT 32 A1COT H11 H3 H 0 1 N N N N N N 16.523 42.775 -14.986 -4.448 2.816 -0.026 H11 A1COT 33 A1COT H14 H4 H 0 1 N N N N N N 14.005 43.881 -22.762 1.196 4.699 1.222 H14 A1COT 34 A1COT H15 H5 H 0 1 N N N N N N 15.667 44.562 -22.709 0.578 5.312 -0.328 H15 A1COT 35 A1COT H16 H6 H 0 1 N N N N N N 14.710 41.895 -23.711 2.091 3.806 -1.553 H16 A1COT 36 A1COT H17 H7 H 0 1 N N N N N N 15.739 43.132 -24.509 3.018 4.822 -0.424 H17 A1COT 37 A1COT H18 H8 H 0 1 N N N N N N 16.820 40.937 -23.582 3.684 2.366 -0.391 H18 A1COT 38 A1COT H19 H9 H 0 1 N N N N N N 17.636 42.517 -23.330 3.156 2.991 1.196 H19 A1COT 39 A1COT H1 H10 H 0 1 N N N N N N 21.734 42.267 -19.520 2.730 0.736 -2.438 H1 A1COT 40 A1COT H2 H11 H 0 1 N N N N N N 20.827 40.876 -18.835 3.916 -0.327 -3.233 H2 A1COT 41 A1COT H3 H12 H 0 1 N N N N N N 22.219 40.588 -19.934 2.227 -0.299 -3.796 H3 A1COT 42 A1COT H4 H13 H 0 1 N N N N N N 19.610 41.954 -20.660 1.489 -1.253 -1.630 H4 A1COT 43 A1COT H5 H14 H 0 1 N N N N N N 21.002 41.666 -21.759 2.675 -2.316 -2.425 H5 A1COT 44 A1COT H6 H15 H 0 1 N N N N N N 21.722 39.055 -21.771 4.846 -2.633 -1.499 H6 A1COT 45 A1COT H7 H16 H 0 1 N N N N N N 18.324 36.543 -22.444 5.703 -0.989 2.374 H7 A1COT 46 A1COT H8 H17 H 0 1 N N N N N N 16.837 38.361 -21.699 3.639 0.320 2.274 H8 A1COT 47 A1COT H12 H18 H 0 1 N N N N N N 14.134 43.330 -14.814 -5.538 0.611 0.010 H12 A1COT 48 A1COT H13 H19 H 0 1 N N N N N N 13.673 42.529 -18.987 -1.711 -1.281 0.200 H13 A1COT 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1COT C1 C2 SING N N 1 A1COT C2 C3 SING N N 2 A1COT C3 C4 DOUB Y N 3 A1COT C4 C5 SING Y N 4 A1COT C5 C6 SING N N 5 A1COT C6 N1 TRIP N N 6 A1COT C5 C7 DOUB Y N 7 A1COT C7 C8 SING Y N 8 A1COT C8 C9 DOUB Y N 9 A1COT C9 C10 SING N N 10 A1COT C10 C11 DOUB N N 11 A1COT C11 N2 SING N N 12 A1COT N2 C12 SING N N 13 A1COT C12 C13 DOUB Y N 14 A1COT C13 C14 SING Y N 15 A1COT C14 C15 DOUB Y N 16 A1COT C15 C16 SING Y N 17 A1COT C16 O1 SING N N 18 A1COT O1 C17 SING N N 19 A1COT C17 F1 SING N N 20 A1COT C17 F2 SING N N 21 A1COT C17 F3 SING N N 22 A1COT C16 C18 DOUB Y N 23 A1COT N2 C19 SING N N 24 A1COT C19 N3 DOUB N N 25 A1COT N3 C20 SING N N 26 A1COT C20 C21 SING N N 27 A1COT C21 C22 SING N N 28 A1COT C22 N4 SING N N 29 A1COT C3 C9 SING Y N 30 A1COT C10 N4 SING N N 31 A1COT C12 C18 SING Y N 32 A1COT C19 N4 SING N N 33 A1COT C11 H9 SING N N 34 A1COT C13 H10 SING N N 35 A1COT C14 H11 SING N N 36 A1COT C20 H14 SING N N 37 A1COT C20 H15 SING N N 38 A1COT C21 H16 SING N N 39 A1COT C21 H17 SING N N 40 A1COT C22 H18 SING N N 41 A1COT C22 H19 SING N N 42 A1COT C1 H1 SING N N 43 A1COT C1 H2 SING N N 44 A1COT C1 H3 SING N N 45 A1COT C2 H4 SING N N 46 A1COT C2 H5 SING N N 47 A1COT C4 H6 SING N N 48 A1COT C7 H7 SING N N 49 A1COT C8 H8 SING N N 50 A1COT C15 H12 SING N N 51 A1COT C18 H13 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1COT SMILES ACDLabs 14.52 "FC(F)(F)Oc1cccc(c1)N1C=C(N2CCCN=C21)c1ccc(C#N)cc1CC" A1COT InChI InChI 1.06 "InChI=1S/C22H19F3N4O/c1-2-16-11-15(13-26)7-8-19(16)20-14-29(21-27-9-4-10-28(20)21)17-5-3-6-18(12-17)30-22(23,24)25/h3,5-8,11-12,14H,2,4,9-10H2,1H3" A1COT InChIKey InChI 1.06 BCELDXVLFLPUFF-UHFFFAOYSA-N A1COT SMILES_CANONICAL CACTVS 3.385 "CCc1cc(ccc1C2=CN(c3cccc(OC(F)(F)F)c3)C4=NCCCN24)C#N" A1COT SMILES CACTVS 3.385 "CCc1cc(ccc1C2=CN(c3cccc(OC(F)(F)F)c3)C4=NCCCN24)C#N" A1COT SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCc1cc(ccc1C2=CN(C3=NCCCN23)c4cccc(c4)OC(F)(F)F)C#N" A1COT SMILES "OpenEye OEToolkits" 3.1.0.0 "CCc1cc(ccc1C2=CN(C3=NCCCN23)c4cccc(c4)OC(F)(F)F)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1COT "SYSTEMATIC NAME" ACDLabs 14.52 "(4P)-3-ethyl-4-{(1P,4R)-1-[3-(trifluoromethoxy)phenyl]-1,5,6,7-tetrahydroimidazo[1,2-a]pyrimidin-3-yl}benzonitrile" A1COT "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-ethyl-4-[1-[3-(trifluoromethyloxy)phenyl]-6,7-dihydro-5~{H}-imidazo[1,2-a]pyrimidin-3-yl]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1COT "Create component" 2025-08-22 RCSB A1COT "Initial release" 2026-08-26 RCSB #