data_A1CTM # _chem_comp.id A1CTM _chem_comp.name "2-(2-amino-4-methyl-1H-1,3-benzimidazol-1-yl)-N-[2,6-dichloro-4-(phenoxyacetyl)phenyl]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H20 Cl2 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-15 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 483.347 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CTM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Y8O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CTM C1 C1 C 0 1 N N N N N N -16.690 5.706 15.018 7.383 -2.610 2.299 C1 A1CTM 1 A1CTM C2 C2 C 0 1 Y N N N N N -15.640 6.678 14.513 6.405 -2.460 1.163 C2 A1CTM 2 A1CTM C3 C3 C 0 1 Y N N N N N -15.679 7.238 13.254 5.994 -3.567 0.454 C3 A1CTM 3 A1CTM C4 C4 C 0 1 Y N N N N N -14.713 8.115 12.770 5.094 -3.438 -0.593 C4 A1CTM 4 A1CTM C5 C5 C 0 1 Y N N N N N -13.660 8.513 13.575 4.598 -2.198 -0.940 C5 A1CTM 5 A1CTM C6 C6 C 0 1 Y N N N N N -13.619 7.969 14.856 5.001 -1.073 -0.237 C6 A1CTM 6 A1CTM C7 C7 C 0 1 Y N N N N N -14.581 7.063 15.332 5.907 -1.198 0.828 C7 A1CTM 7 A1CTM N1 N1 N 0 1 Y N N N N N -14.332 6.659 16.622 6.111 0.049 1.329 N1 A1CTM 8 A1CTM C8 C8 C 0 1 Y N N N N N -13.204 7.268 16.977 5.397 0.915 0.655 C8 A1CTM 9 A1CTM N2 N2 N 0 1 N N N N N N -12.618 7.132 18.159 5.365 2.273 0.895 N2 A1CTM 10 A1CTM N3 N3 N 0 1 Y N N N N N -12.739 8.033 15.928 4.700 0.276 -0.330 N3 A1CTM 11 A1CTM C9 C9 C 0 1 N N N N N N -11.543 8.887 15.969 3.789 0.899 -1.294 C9 A1CTM 12 A1CTM C10 C10 C 0 1 N N N N N N -11.868 10.352 16.187 2.396 0.933 -0.720 C10 A1CTM 13 A1CTM O1 O1 O 0 1 N N N N N N -12.925 10.732 16.667 2.185 0.483 0.386 O1 A1CTM 14 A1CTM N4 N4 N 0 1 N N N N N N -10.903 11.183 15.770 1.385 1.466 -1.435 N4 A1CTM 15 A1CTM C11 C11 C 0 1 Y N N N N N -10.930 12.597 15.966 0.080 1.404 -0.949 C11 A1CTM 16 A1CTM C12 C12 C 0 1 Y N N N N N -10.661 13.155 17.199 -0.419 2.441 -0.165 C12 A1CTM 17 A1CTM CL1 CL1 CL 0 0 N N N N N N -10.155 12.140 18.494 0.586 3.808 0.206 CL1 A1CTM 18 A1CTM C13 C13 C 0 1 Y N N N N N -10.694 14.510 17.397 -1.707 2.385 0.316 C13 A1CTM 19 A1CTM C14 C14 C 0 1 Y N N N N N -11.039 15.356 16.357 -2.517 1.282 0.016 C14 A1CTM 20 A1CTM C15 C15 C 0 1 N N N N N N -11.015 16.812 16.668 -3.892 1.218 0.527 C15 A1CTM 21 A1CTM O2 O2 O 0 1 N N N N N N -10.929 17.199 17.817 -4.328 2.121 1.210 O2 A1CTM 22 A1CTM C16 C16 C 0 1 N N N N N N -10.893 17.763 15.523 -4.762 0.031 0.203 C16 A1CTM 23 A1CTM O3 O3 O 0 1 N N N N N N -10.924 19.086 16.037 -6.045 0.200 0.809 O3 A1CTM 24 A1CTM C17 C17 C 0 1 Y N N N N N -9.786 19.693 16.484 -6.955 -0.790 0.613 C17 A1CTM 25 A1CTM C18 C18 C 0 1 Y N N N N N -9.834 21.077 16.567 -8.221 -0.690 1.172 C18 A1CTM 26 A1CTM C19 C19 C 0 1 Y N N N N N -8.720 21.786 17.002 -9.144 -1.698 0.971 C19 A1CTM 27 A1CTM C20 C20 C 0 1 Y N N N N N -7.561 21.120 17.335 -8.809 -2.804 0.213 C20 A1CTM 28 A1CTM C21 C21 C 0 1 Y N N N N N -7.506 19.757 17.225 -7.548 -2.906 -0.345 C21 A1CTM 29 A1CTM C22 C22 C 0 1 Y N N N N N -8.622 19.032 16.849 -6.622 -1.898 -0.152 C22 A1CTM 30 A1CTM C23 C23 C 0 1 Y N N N N N -11.325 14.811 15.105 -2.011 0.241 -0.773 C23 A1CTM 31 A1CTM C24 C24 C 0 1 Y N N N N N -11.263 13.448 14.941 -0.723 0.308 -1.254 C24 A1CTM 32 A1CTM CL2 CL2 CL 0 0 N N N N N N -11.566 12.712 13.410 -0.096 -0.981 -2.233 CL2 A1CTM 33 A1CTM H2 H1 H 0 1 N N N N N N -16.384 4.677 14.778 6.838 -2.781 3.228 H2 A1CTM 34 A1CTM H3 H2 H 0 1 N N N N N N -16.794 5.812 16.108 8.041 -3.457 2.103 H3 A1CTM 35 A1CTM H1 H3 H 0 1 N N N N N N -17.654 5.924 14.535 7.978 -1.701 2.389 H1 A1CTM 36 A1CTM H4 H4 H 0 1 N N N N N N -16.505 6.982 12.607 6.376 -4.543 0.716 H4 A1CTM 37 A1CTM H5 H5 H 0 1 N N N N N N -14.786 8.488 11.759 4.780 -4.314 -1.141 H5 A1CTM 38 A1CTM H6 H6 H 0 1 N N N N N N -12.910 9.208 13.228 3.898 -2.105 -1.757 H6 A1CTM 39 A1CTM H8 H7 H 0 1 N N N N N N -13.154 6.508 18.728 5.898 2.651 1.611 H8 A1CTM 40 A1CTM H7 H8 H 0 1 N N N N N N -11.698 6.761 18.034 4.808 2.849 0.348 H7 A1CTM 41 A1CTM H9 H9 H 0 1 N N N N N N -10.896 8.545 16.791 4.121 1.916 -1.503 H9 A1CTM 42 A1CTM H10 H10 H 0 1 N N N N N N -11.007 8.785 15.014 3.787 0.320 -2.218 H10 A1CTM 43 A1CTM H11 H11 H 0 1 N N N N N N -10.117 10.789 15.293 1.566 1.891 -2.287 H11 A1CTM 44 A1CTM H12 H12 H 0 1 N N N N N N -10.450 14.919 18.366 -2.093 3.190 0.925 H12 A1CTM 45 A1CTM H14 H13 H 0 1 N N N N N N -11.731 17.615 14.826 -4.878 -0.050 -0.878 H14 A1CTM 46 A1CTM H13 H14 H 0 1 N N N N N N -9.943 17.591 14.996 -4.295 -0.877 0.587 H13 A1CTM 47 A1CTM H15 H15 H 0 1 N N N N N N -10.737 21.604 16.294 -8.483 0.174 1.764 H15 A1CTM 48 A1CTM H16 H16 H 0 1 N N N N N N -8.763 22.862 17.079 -10.130 -1.621 1.407 H16 A1CTM 49 A1CTM H17 H17 H 0 1 N N N N N N -6.699 21.671 17.681 -9.532 -3.591 0.057 H17 A1CTM 50 A1CTM H18 H18 H 0 1 N N N N N N -6.580 19.242 17.434 -7.288 -3.772 -0.936 H18 A1CTM 51 A1CTM H19 H19 H 0 1 N N N N N N -8.588 17.953 16.839 -5.639 -1.976 -0.593 H19 A1CTM 52 A1CTM H20 H20 H 0 1 N N N N N N -11.591 15.451 14.277 -2.633 -0.611 -1.007 H20 A1CTM 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CTM C4 C3 SING Y N 1 A1CTM C4 C5 DOUB Y N 2 A1CTM C3 C2 DOUB Y N 3 A1CTM CL2 C24 SING N N 4 A1CTM C5 C6 SING Y N 5 A1CTM C2 C1 SING N N 6 A1CTM C2 C7 SING Y N 7 A1CTM C6 C7 DOUB Y N 8 A1CTM C6 N3 SING Y N 9 A1CTM C24 C23 DOUB Y N 10 A1CTM C24 C11 SING Y N 11 A1CTM C23 C14 SING Y N 12 A1CTM C7 N1 SING Y N 13 A1CTM C16 O3 SING N N 14 A1CTM C16 C15 SING N N 15 A1CTM N4 C11 SING N N 16 A1CTM N4 C10 SING N N 17 A1CTM N3 C9 SING N N 18 A1CTM N3 C8 SING Y N 19 A1CTM C11 C12 DOUB Y N 20 A1CTM C9 C10 SING N N 21 A1CTM O3 C17 SING N N 22 A1CTM C10 O1 DOUB N N 23 A1CTM C14 C15 SING N N 24 A1CTM C14 C13 DOUB Y N 25 A1CTM C17 C18 DOUB Y N 26 A1CTM C17 C22 SING Y N 27 A1CTM C18 C19 SING Y N 28 A1CTM N1 C8 DOUB Y N 29 A1CTM C15 O2 DOUB N N 30 A1CTM C22 C21 DOUB Y N 31 A1CTM C8 N2 SING N N 32 A1CTM C19 C20 DOUB Y N 33 A1CTM C12 C13 SING Y N 34 A1CTM C12 CL1 SING N N 35 A1CTM C21 C20 SING Y N 36 A1CTM C1 H2 SING N N 37 A1CTM C1 H3 SING N N 38 A1CTM C1 H1 SING N N 39 A1CTM C3 H4 SING N N 40 A1CTM C4 H5 SING N N 41 A1CTM C5 H6 SING N N 42 A1CTM N2 H8 SING N N 43 A1CTM N2 H7 SING N N 44 A1CTM C9 H9 SING N N 45 A1CTM C9 H10 SING N N 46 A1CTM N4 H11 SING N N 47 A1CTM C13 H12 SING N N 48 A1CTM C16 H14 SING N N 49 A1CTM C16 H13 SING N N 50 A1CTM C18 H15 SING N N 51 A1CTM C19 H16 SING N N 52 A1CTM C20 H17 SING N N 53 A1CTM C21 H18 SING N N 54 A1CTM C22 H19 SING N N 55 A1CTM C23 H20 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CTM SMILES ACDLabs 14.52 "Clc1cc(cc(Cl)c1NC(=O)Cn1c2cccc(C)c2nc1N)C(=O)COc1ccccc1" A1CTM InChI InChI 1.06 "InChI=1S/C24H20Cl2N4O3/c1-14-6-5-9-19-22(14)29-24(27)30(19)12-21(32)28-23-17(25)10-15(11-18(23)26)20(31)13-33-16-7-3-2-4-8-16/h2-11H,12-13H2,1H3,(H2,27,29)(H,28,32)" A1CTM InChIKey InChI 1.06 ZGNZXIVJQOFUJH-UHFFFAOYSA-N A1CTM SMILES_CANONICAL CACTVS 3.385 "Cc1cccc2n(CC(=O)Nc3c(Cl)cc(cc3Cl)C(=O)COc4ccccc4)c(N)nc12" A1CTM SMILES CACTVS 3.385 "Cc1cccc2n(CC(=O)Nc3c(Cl)cc(cc3Cl)C(=O)COc4ccccc4)c(N)nc12" A1CTM SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc2c1nc(n2CC(=O)Nc3c(cc(cc3Cl)C(=O)COc4ccccc4)Cl)N" A1CTM SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc2c1nc(n2CC(=O)Nc3c(cc(cc3Cl)C(=O)COc4ccccc4)Cl)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CTM "SYSTEMATIC NAME" ACDLabs 14.52 "2-(2-amino-4-methyl-1H-1,3-benzimidazol-1-yl)-N-[2,6-dichloro-4-(phenoxyacetyl)phenyl]acetamide" A1CTM "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-(2-azanyl-4-methyl-benzimidazol-1-yl)-~{N}-[2,6-bis(chloranyl)-4-(2-phenoxyethanoyl)phenyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CTM "Create component" 2025-09-15 RCSB A1CTM "Initial release" 2026-04-08 RCSB #