data_A1CTR # _chem_comp.id A1CTR _chem_comp.name "2-(2-amino-4-methyl-1H-1,3-benzimidazol-1-yl)-N-(2,4,6-trichlorophenyl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 Cl3 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-15 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 383.660 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CTR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Y8K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CTR N1 N1 N 0 1 Y N N N N N 12.787 8.324 2.890 -2.570 0.744 0.662 N1 A1CTR 1 A1CTR N3 N2 N 0 1 N N N N N N 12.820 7.421 0.724 -2.470 3.087 0.008 N3 A1CTR 2 A1CTR C4 C1 C 0 1 Y N N N N N 15.522 7.603 5.848 -5.365 -2.000 -0.650 C4 A1CTR 3 A1CTR C5 C2 C 0 1 Y N N N N N 14.481 8.457 6.177 -4.416 -2.486 0.237 C5 A1CTR 4 A1CTR C6 C3 C 0 1 Y N N N N N 13.496 8.798 5.286 -3.436 -1.654 0.738 C6 A1CTR 5 A1CTR C7 C4 C 0 1 Y N N N N N 13.370 7.545 1.940 -3.028 1.827 -0.032 C7 A1CTR 6 A1CTR C8 C5 C 0 1 N N N N N N 11.581 9.145 2.808 -1.421 0.716 1.570 C8 A1CTR 7 A1CTR C10 C6 C 0 1 Y N N N N N 11.253 12.890 3.301 2.181 0.053 0.693 C10 A1CTR 8 A1CTR C13 C7 C 0 1 Y N N N N N 11.719 15.595 3.528 4.502 -0.391 -0.749 C13 A1CTR 9 A1CTR C15 C8 C 0 1 Y N N N N N 11.154 13.718 2.200 2.903 1.128 0.189 C15 A1CTR 10 A1CTR C1 C9 C 0 1 Y N N N N N 13.593 8.227 4.022 -3.398 -0.323 0.352 C1 A1CTR 11 A1CTR C11 C10 C 0 1 Y N N N N N 11.580 13.460 4.518 2.626 -1.244 0.472 C11 A1CTR 12 A1CTR C12 C11 C 0 1 Y N N N N N 11.811 14.815 4.658 3.785 -1.463 -0.249 C12 A1CTR 13 A1CTR C14 C12 C 0 1 Y N N N N N 11.393 15.079 2.292 4.062 0.903 -0.531 C14 A1CTR 14 A1CTR C16 C13 C 0 1 N N N N N N 16.755 6.090 4.211 -6.377 -0.162 -2.009 C16 A1CTR 15 A1CTR C2 C14 C 0 1 Y N N N N N 14.638 7.357 3.691 -4.356 0.175 -0.546 C2 A1CTR 16 A1CTR C3 C15 C 0 1 Y N N N N N 15.637 7.027 4.588 -5.342 -0.681 -1.044 C3 A1CTR 17 A1CTR C9 C16 C 0 1 N N N N N N 11.966 10.620 2.787 -0.177 0.363 0.795 C9 A1CTR 18 A1CTR N2 N3 N 0 1 Y N N N N N 14.478 6.952 2.367 -4.077 1.490 -0.740 N2 A1CTR 19 A1CTR N4 N4 N 0 1 N N N N N N 11.029 11.490 3.230 1.010 0.278 1.428 N4 A1CTR 20 A1CTR O1 O1 O 0 1 N N N N N N 13.079 10.969 2.388 -0.244 0.154 -0.398 O1 A1CTR 21 A1CTR CL1 CL1 CL 0 0 N N N N N N 11.640 12.422 5.885 1.727 -2.590 1.100 CL1 A1CTR 22 A1CTR CL2 CL2 CL 0 0 N N N N N N 10.731 13.072 0.672 2.351 2.751 0.463 CL2 A1CTR 23 A1CTR CL3 CL3 CL 0 0 N N N N N N 12.023 17.294 3.656 5.958 -0.669 -1.653 CL3 A1CTR 24 A1CTR H1 H1 H 0 1 N N N N N N 13.375 6.803 0.168 -2.856 3.806 -0.516 H1 A1CTR 25 A1CTR H2 H2 H 0 1 N N N N N N 11.896 7.050 0.813 -1.690 3.255 0.560 H2 A1CTR 26 A1CTR H3 H3 H 0 1 N N N N N N 16.268 7.378 6.595 -6.127 -2.661 -1.035 H3 A1CTR 27 A1CTR H4 H4 H 0 1 N N N N N N 14.444 8.870 7.174 -4.445 -3.523 0.539 H4 A1CTR 28 A1CTR H5 H5 H 0 1 N N N N N N 12.693 9.470 5.550 -2.701 -2.039 1.429 H5 A1CTR 29 A1CTR H6 H6 H 0 1 N N N N N N 10.943 8.946 3.681 -1.296 1.697 2.029 H6 A1CTR 30 A1CTR H7 H7 H 0 1 N N N N N N 11.031 8.897 1.888 -1.589 -0.030 2.347 H7 A1CTR 31 A1CTR H8 H8 H 0 1 N N N N N N 12.055 15.246 5.618 4.131 -2.471 -0.421 H8 A1CTR 32 A1CTR H9 H9 H 0 1 N N N N N N 11.326 15.716 1.423 4.624 1.738 -0.923 H9 A1CTR 33 A1CTR H10 H10 H 0 1 N N N N N N 17.594 6.668 3.795 -6.015 -0.283 -3.030 H10 A1CTR 34 A1CTR H11 H11 H 0 1 N N N N N N 17.093 5.545 5.104 -7.304 -0.722 -1.883 H11 A1CTR 35 A1CTR H12 H12 H 0 1 N N N N N N 16.395 5.373 3.458 -6.561 0.894 -1.811 H12 A1CTR 36 A1CTR H13 H13 H 0 1 N N N N N N 10.141 11.132 3.520 1.053 0.373 2.393 H13 A1CTR 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CTR CL2 C15 SING N N 1 A1CTR N3 C7 SING N N 2 A1CTR C7 N2 DOUB Y N 3 A1CTR C7 N1 SING Y N 4 A1CTR C15 C14 DOUB Y N 5 A1CTR C15 C10 SING Y N 6 A1CTR C14 C13 SING Y N 7 A1CTR N2 C2 SING Y N 8 A1CTR O1 C9 DOUB N N 9 A1CTR C9 C8 SING N N 10 A1CTR C9 N4 SING N N 11 A1CTR C8 N1 SING N N 12 A1CTR N1 C1 SING Y N 13 A1CTR N4 C10 SING N N 14 A1CTR C10 C11 DOUB Y N 15 A1CTR C13 CL3 SING N N 16 A1CTR C13 C12 DOUB Y N 17 A1CTR C2 C1 DOUB Y N 18 A1CTR C2 C3 SING Y N 19 A1CTR C1 C6 SING Y N 20 A1CTR C16 C3 SING N N 21 A1CTR C11 C12 SING Y N 22 A1CTR C11 CL1 SING N N 23 A1CTR C3 C4 DOUB Y N 24 A1CTR C6 C5 DOUB Y N 25 A1CTR C4 C5 SING Y N 26 A1CTR N3 H1 SING N N 27 A1CTR N3 H2 SING N N 28 A1CTR C4 H3 SING N N 29 A1CTR C5 H4 SING N N 30 A1CTR C6 H5 SING N N 31 A1CTR C8 H6 SING N N 32 A1CTR C8 H7 SING N N 33 A1CTR C12 H8 SING N N 34 A1CTR C14 H9 SING N N 35 A1CTR C16 H10 SING N N 36 A1CTR C16 H11 SING N N 37 A1CTR C16 H12 SING N N 38 A1CTR N4 H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CTR SMILES ACDLabs 14.52 "Clc1cc(Cl)cc(Cl)c1NC(=O)Cn1c2cccc(C)c2nc1N" A1CTR InChI InChI 1.06 "InChI=1S/C16H13Cl3N4O/c1-8-3-2-4-12-14(8)22-16(20)23(12)7-13(24)21-15-10(18)5-9(17)6-11(15)19/h2-6H,7H2,1H3,(H2,20,22)(H,21,24)" A1CTR InChIKey InChI 1.06 ZTQLJQKXRDDICG-UHFFFAOYSA-N A1CTR SMILES_CANONICAL CACTVS 3.385 "Cc1cccc2n(CC(=O)Nc3c(Cl)cc(Cl)cc3Cl)c(N)nc12" A1CTR SMILES CACTVS 3.385 "Cc1cccc2n(CC(=O)Nc3c(Cl)cc(Cl)cc3Cl)c(N)nc12" A1CTR SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc2c1nc(n2CC(=O)Nc3c(cc(cc3Cl)Cl)Cl)N" A1CTR SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc2c1nc(n2CC(=O)Nc3c(cc(cc3Cl)Cl)Cl)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CTR "SYSTEMATIC NAME" ACDLabs 14.52 "2-(2-amino-4-methyl-1H-1,3-benzimidazol-1-yl)-N-(2,4,6-trichlorophenyl)acetamide" A1CTR "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-(2-azanyl-4-methyl-benzimidazol-1-yl)-~{N}-[2,4,6-tris(chloranyl)phenyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CTR "Create component" 2025-09-15 RCSB A1CTR "Initial release" 2026-04-08 RCSB #