data_A1CUP # _chem_comp.id A1CUP _chem_comp.name "N-(2,4-dimethylphenyl)-N'-[(pyridin-4-yl)methyl]thiourea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H17 N3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-19 _chem_comp.pdbx_modified_date 2026-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 271.381 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CUP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 13MZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CUP C1 C1 C 0 1 N N N N N N 23.825 28.595 -17.153 6.459 0.398 0.144 C1 A1CUP 1 A1CUP C2 C2 C 0 1 Y N N N N N 23.142 29.933 -16.989 4.988 0.135 -0.056 C2 A1CUP 2 A1CUP C3 C3 C 0 1 Y N N N N N 23.736 30.944 -16.263 4.148 1.167 -0.431 C3 A1CUP 3 A1CUP C4 C4 C 0 1 Y N N N N N 23.131 32.172 -16.101 2.800 0.930 -0.615 C4 A1CUP 4 A1CUP C5 C5 C 0 1 Y N N N N N 21.891 32.403 -16.672 2.289 -0.346 -0.423 C5 A1CUP 5 A1CUP C6 C6 C 0 1 N N N N N N 21.447 34.774 -17.276 0.011 0.235 -0.057 C6 A1CUP 6 A1CUP C7 C7 C 0 1 N N N N N N 20.762 37.130 -17.554 -2.294 0.850 0.437 C7 A1CUP 7 A1CUP C8 C8 C 0 1 Y N N N N N 21.408 38.206 -16.718 -3.678 0.312 0.180 C8 A1CUP 8 A1CUP C9 C9 C 0 1 Y N N N N N 22.768 38.449 -16.812 -4.278 -0.562 1.074 C9 A1CUP 9 A1CUP C10 C10 C 0 1 Y N N N N N 23.336 39.444 -16.039 -5.548 -1.034 0.805 C10 A1CUP 10 A1CUP C11 C11 C 0 1 Y N N N N N 21.336 39.968 -15.107 -5.652 0.170 -1.156 C11 A1CUP 11 A1CUP C12 C12 C 0 1 Y N N N N N 20.683 38.995 -15.841 -4.385 0.683 -0.954 C12 A1CUP 12 A1CUP C13 C13 C 0 1 Y N N N N N 21.249 31.410 -17.408 3.135 -1.381 -0.047 C13 A1CUP 13 A1CUP C14 C14 C 0 1 N N N N N N 19.912 31.650 -18.056 2.584 -2.768 0.162 C14 A1CUP 14 A1CUP C15 C15 C 0 1 Y N N N N N 21.904 30.188 -17.557 4.483 -1.139 0.131 C15 A1CUP 15 A1CUP N1 N1 N 0 1 N N N N N N 21.241 33.675 -16.528 0.923 -0.590 -0.609 N1 A1CUP 16 A1CUP N2 N2 N 0 1 N N N N N N 20.723 35.828 -16.900 -1.303 -0.047 -0.162 N2 A1CUP 17 A1CUP N3 N3 N 0 1 Y N N N N N 22.645 40.204 -15.191 -6.189 -0.663 -0.286 N3 A1CUP 18 A1CUP S1 S1 S 0 1 N N N N N N 22.530 34.882 -18.553 0.521 1.642 0.775 S1 A1CUP 19 A1CUP H1 H1 H 0 1 N N N N N N 23.525 27.927 -16.333 6.640 0.679 1.182 H1 A1CUP 20 A1CUP H2 H2 H 0 1 N N N N N N 23.532 28.149 -18.115 7.024 -0.504 -0.091 H2 A1CUP 21 A1CUP H3 H3 H 0 1 N N N N N N 24.916 28.735 -17.131 6.776 1.207 -0.512 H3 A1CUP 22 A1CUP H4 H4 H 0 1 N N N N N N 24.700 30.769 -15.810 4.547 2.160 -0.580 H4 A1CUP 23 A1CUP H5 H5 H 0 1 N N N N N N 23.621 32.949 -15.533 2.144 1.737 -0.908 H5 A1CUP 24 A1CUP H8 H6 H 0 1 N N N N N N 21.328 37.031 -18.492 -2.202 1.842 -0.006 H8 A1CUP 25 A1CUP H9 H7 H 0 1 N N N N N N 19.730 37.437 -17.779 -2.124 0.915 1.512 H9 A1CUP 26 A1CUP H10 H8 H 0 1 N N N N N N 23.380 37.866 -17.484 -3.758 -0.870 1.969 H10 A1CUP 27 A1CUP H11 H9 H 0 1 N N N N N N 24.399 39.615 -16.127 -6.022 -1.715 1.496 H11 A1CUP 28 A1CUP H12 H10 H 0 1 N N N N N N 20.752 40.571 -14.427 -6.209 0.455 -2.037 H12 A1CUP 29 A1CUP H13 H11 H 0 1 N N N N N N 19.618 38.852 -15.731 -3.951 1.366 -1.670 H13 A1CUP 30 A1CUP H14 H12 H 0 1 N N N N N N 20.062 32.053 -19.069 2.625 -3.321 -0.776 H14 A1CUP 31 A1CUP H15 H13 H 0 1 N N N N N N 19.359 30.701 -18.117 3.180 -3.286 0.915 H15 A1CUP 32 A1CUP H16 H14 H 0 1 N N N N N N 19.338 32.371 -17.456 1.550 -2.701 0.500 H16 A1CUP 33 A1CUP H17 H15 H 0 1 N N N N N N 21.428 29.411 -18.137 5.142 -1.944 0.419 H17 A1CUP 34 A1CUP H6 H16 H 0 1 N N N N N N 20.565 33.752 -15.795 0.633 -1.352 -1.133 H6 A1CUP 35 A1CUP H7 H17 H 0 1 N N N N N N 20.112 35.718 -16.116 -1.592 -0.843 -0.634 H7 A1CUP 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CUP C1 C2 SING N N 1 A1CUP C2 C3 DOUB Y N 2 A1CUP C3 C4 SING Y N 3 A1CUP C4 C5 DOUB Y N 4 A1CUP C5 N1 SING N N 5 A1CUP N1 C6 SING N N 6 A1CUP C6 S1 DOUB N N 7 A1CUP C6 N2 SING N N 8 A1CUP N2 C7 SING N N 9 A1CUP C7 C8 SING N N 10 A1CUP C8 C9 DOUB Y N 11 A1CUP C9 C10 SING Y N 12 A1CUP C10 N3 DOUB Y N 13 A1CUP N3 C11 SING Y N 14 A1CUP C11 C12 DOUB Y N 15 A1CUP C8 C12 SING Y N 16 A1CUP C5 C13 SING Y N 17 A1CUP C13 C14 SING N N 18 A1CUP C13 C15 DOUB Y N 19 A1CUP C2 C15 SING Y N 20 A1CUP C1 H1 SING N N 21 A1CUP C1 H2 SING N N 22 A1CUP C1 H3 SING N N 23 A1CUP C3 H4 SING N N 24 A1CUP C4 H5 SING N N 25 A1CUP C7 H8 SING N N 26 A1CUP C7 H9 SING N N 27 A1CUP C9 H10 SING N N 28 A1CUP C10 H11 SING N N 29 A1CUP C11 H12 SING N N 30 A1CUP C12 H13 SING N N 31 A1CUP C14 H14 SING N N 32 A1CUP C14 H15 SING N N 33 A1CUP C14 H16 SING N N 34 A1CUP C15 H17 SING N N 35 A1CUP N1 H6 SING N N 36 A1CUP N2 H7 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CUP SMILES ACDLabs 14.52 "Cc1ccc(NC(=S)NCc2ccncc2)c(C)c1" A1CUP InChI InChI 1.06 "InChI=1S/C15H17N3S/c1-11-3-4-14(12(2)9-11)18-15(19)17-10-13-5-7-16-8-6-13/h3-9H,10H2,1-2H3,(H2,17,18,19)" A1CUP InChIKey InChI 1.06 AVMBVPJDQAVSAV-UHFFFAOYSA-N A1CUP SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(NC(=S)NCc2ccncc2)c(C)c1" A1CUP SMILES CACTVS 3.385 "Cc1ccc(NC(=S)NCc2ccncc2)c(C)c1" A1CUP SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(c(c1)C)NC(=S)NCc2ccncc2" A1CUP SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1ccc(c(c1)C)NC(=S)NCc2ccncc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CUP "SYSTEMATIC NAME" ACDLabs 14.52 "N-(2,4-dimethylphenyl)-N'-[(pyridin-4-yl)methyl]thiourea" A1CUP "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-(2,4-dimethylphenyl)-3-(pyridin-4-ylmethyl)thiourea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CUP "Create component" 2025-09-19 RCSB A1CUP "Initial release" 2026-02-18 RCSB #