data_A1CV6 # _chem_comp.id A1CV6 _chem_comp.name 1,3-diazepane-2-thione _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H10 N2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-26 _chem_comp.pdbx_modified_date 2026-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 130.211 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CV6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 13PN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CV6 N1 N1 N 0 1 N N N N N N 20.636 36.857 -16.873 0.118 1.183 0.058 N1 A1CV6 1 A1CV6 C5 C1 C 0 1 N N N N N N 22.923 37.051 -18.582 -1.207 -1.414 0.424 C5 A1CV6 2 A1CV6 N2 N2 N 0 1 N N N N N N 22.519 38.003 -17.554 0.234 -1.162 0.373 N2 A1CV6 3 A1CV6 S1 S1 S 0 1 N N N N N N 21.159 39.083 -15.580 2.464 0.046 -0.206 S1 A1CV6 4 A1CV6 C1 C2 C 0 1 N N N N N N 21.455 37.910 -16.743 0.781 0.012 0.105 C1 A1CV6 5 A1CV6 C2 C3 C 0 1 N N N N N N 20.731 35.789 -17.861 -1.236 1.299 0.600 C2 A1CV6 6 A1CV6 C3 C4 C 0 1 N N N N N N 20.623 36.335 -19.272 -2.243 0.706 -0.366 C3 A1CV6 7 A1CV6 C4 C5 C 0 1 N N N N N N 21.934 36.935 -19.727 -1.911 -0.726 -0.755 C4 A1CV6 8 A1CV6 H1 H1 H 0 1 N N N N N N 19.879 36.797 -16.223 0.545 1.960 -0.337 H1 A1CV6 9 A1CV6 H8 H2 H 0 1 N N N N N N 23.032 36.061 -18.115 -1.388 -2.488 0.384 H8 A1CV6 10 A1CV6 H9 H3 H 0 1 N N N N N N 23.892 37.372 -18.991 -1.612 -1.013 1.354 H9 A1CV6 11 A1CV6 H10 H4 H 0 1 N N N N N N 23.097 38.811 -17.442 0.828 -1.908 0.549 H10 A1CV6 12 A1CV6 H2 H5 H 0 1 N N N N N N 21.699 35.280 -17.747 -1.291 0.766 1.550 H2 A1CV6 13 A1CV6 H3 H6 H 0 1 N N N N N N 19.916 35.070 -17.691 -1.470 2.350 0.765 H3 A1CV6 14 A1CV6 H4 H7 H 0 1 N N N N N N 20.347 35.517 -19.953 -3.229 0.724 0.097 H4 A1CV6 15 A1CV6 H5 H8 H 0 1 N N N N N N 19.845 37.112 -19.298 -2.269 1.318 -1.268 H5 A1CV6 16 A1CV6 H6 H9 H 0 1 N N N N N N 22.367 36.294 -20.509 -1.251 -0.724 -1.622 H6 A1CV6 17 A1CV6 H7 H10 H 0 1 N N N N N N 21.744 37.938 -20.138 -2.829 -1.261 -0.995 H7 A1CV6 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CV6 S1 C1 DOUB N N 1 A1CV6 C1 N1 SING N N 2 A1CV6 N1 C2 SING N N 3 A1CV6 C2 C3 SING N N 4 A1CV6 C3 C4 SING N N 5 A1CV6 C4 C5 SING N N 6 A1CV6 C5 N2 SING N N 7 A1CV6 C1 N2 SING N N 8 A1CV6 N1 H1 SING N N 9 A1CV6 C5 H8 SING N N 10 A1CV6 C5 H9 SING N N 11 A1CV6 N2 H10 SING N N 12 A1CV6 C2 H2 SING N N 13 A1CV6 C2 H3 SING N N 14 A1CV6 C3 H4 SING N N 15 A1CV6 C3 H5 SING N N 16 A1CV6 C4 H6 SING N N 17 A1CV6 C4 H7 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CV6 SMILES ACDLabs 14.52 S=C1NCCCCN1 A1CV6 InChI InChI 1.06 "InChI=1S/C5H10N2S/c8-5-6-3-1-2-4-7-5/h1-4H2,(H2,6,7,8)" A1CV6 InChIKey InChI 1.06 ZLJLVKBAMJHNJH-UHFFFAOYSA-N A1CV6 SMILES_CANONICAL CACTVS 3.385 S=C1NCCCCN1 A1CV6 SMILES CACTVS 3.385 S=C1NCCCCN1 A1CV6 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C1CCNC(=S)NC1" A1CV6 SMILES "OpenEye OEToolkits" 3.1.0.0 "C1CCNC(=S)NC1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CV6 "SYSTEMATIC NAME" ACDLabs 14.52 1,3-diazepane-2-thione A1CV6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 1,3-diazepane-2-thione # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CV6 "Create component" 2025-09-26 RCSB A1CV6 "Initial release" 2026-02-18 RCSB #